Fusobacterium sp. CAG:815

Taxonomy: cellular organisms; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1820 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7LW28|R7LW28_9FUSO Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC OS=Fusobacterium sp. CAG:815 OX=1262901 GN=BN791_00451 PE=3 SV=1
MM1 pKa = 7.59ILLFDD6 pKa = 4.31SKK8 pKa = 11.08ASKK11 pKa = 9.0STASAKK17 pKa = 10.09SSKK20 pKa = 9.75VRR22 pKa = 11.84NNPVEE27 pKa = 3.92NSGILAMNMNDD38 pKa = 3.3ARR40 pKa = 11.84SLLTMGEE47 pKa = 3.9YY48 pKa = 9.02DD49 pKa = 3.83TYY51 pKa = 11.49VSSNPVAVDD60 pKa = 2.93YY61 pKa = 11.79AMYY64 pKa = 10.69SNSSDD69 pKa = 3.49FSNSDD74 pKa = 3.29SGFMSEE80 pKa = 5.36FSDD83 pKa = 4.84AVATLTDD90 pKa = 3.42GGFGGFGGFSAGADD104 pKa = 3.57CGASCSSGSFASVCC118 pKa = 3.76

Molecular weight: 12.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7M0S6|R7M0S6_9FUSO Cell division protein FtsZ OS=Fusobacterium sp. CAG:815 OX=1262901 GN=ftsZ PE=3 SV=1
MM1 pKa = 7.68RR2 pKa = 11.84RR3 pKa = 11.84TLEE6 pKa = 3.61GTKK9 pKa = 9.97RR10 pKa = 11.84KK11 pKa = 8.92RR12 pKa = 11.84QNVSGFRR19 pKa = 11.84ARR21 pKa = 11.84MSTPGGRR28 pKa = 11.84EE29 pKa = 3.69VINRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84HH40 pKa = 5.36KK41 pKa = 10.99LSITAKK47 pKa = 10.1KK48 pKa = 9.93RR49 pKa = 11.84AA50 pKa = 3.48

Molecular weight: 5.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1820

0

1820

548868

30

1972

301.6

34.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.458 ± 0.063

1.247 ± 0.025

5.769 ± 0.044

6.685 ± 0.07

4.504 ± 0.052

5.779 ± 0.062

1.492 ± 0.019

8.383 ± 0.056

9.167 ± 0.066

8.87 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.523 ± 0.029

6.372 ± 0.064

3.307 ± 0.036

3.309 ± 0.037

3.355 ± 0.034

6.344 ± 0.05

5.551 ± 0.042

6.228 ± 0.049

0.669 ± 0.017

3.988 ± 0.051
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski