Banana streak CA virus
Average proteome isoelectric point is 6.83
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|F5AY30|F5AY30_9VIRU Reverse transcriptase OS=Banana streak CA virus OX=1016852 PE=4 SV=1
MM1 pKa = 7.8 ASRR4 pKa = 11.84 PRR6 pKa = 11.84 VTGSGSRR13 pKa = 11.84 TQTVAEE19 pKa = 4.82 AGTPLIDD26 pKa = 3.97 DD27 pKa = 4.25 QIRR30 pKa = 11.84 EE31 pKa = 4.17 YY32 pKa = 10.74 RR33 pKa = 11.84 SSRR36 pKa = 11.84 RR37 pKa = 11.84 AAYY40 pKa = 7.49 EE41 pKa = 3.61 AQRR44 pKa = 11.84 VARR47 pKa = 11.84 QAGNIIGRR55 pKa = 11.84 IVGRR59 pKa = 11.84 QPRR62 pKa = 11.84 EE63 pKa = 3.78 HH64 pKa = 6.16 TLSMVVNPNSEE75 pKa = 4.17 LSRR78 pKa = 11.84 SLAHH82 pKa = 7.74 RR83 pKa = 11.84 ARR85 pKa = 11.84 TVPGEE90 pKa = 4.11 VLYY93 pKa = 7.62 MTQRR97 pKa = 11.84 DD98 pKa = 3.96 SPVNRR103 pKa = 11.84 VYY105 pKa = 11.06 RR106 pKa = 11.84 NRR108 pKa = 11.84 TEE110 pKa = 3.86 EE111 pKa = 4.2 RR112 pKa = 11.84 MLVTNGQQDD121 pKa = 2.99 RR122 pKa = 11.84 SFIYY126 pKa = 10.1 PEE128 pKa = 3.98 SFEE131 pKa = 4.26 EE132 pKa = 4.08 LVNAGFEE139 pKa = 4.39 YY140 pKa = 10.28 IHH142 pKa = 7.08 LGVLQVRR149 pKa = 11.84 LQIMHH154 pKa = 6.69 RR155 pKa = 11.84 TYY157 pKa = 11.04 AGTMALVVFRR167 pKa = 11.84 DD168 pKa = 3.92 TRR170 pKa = 11.84 WTQEE174 pKa = 3.28 GDD176 pKa = 3.12 EE177 pKa = 4.56 DD178 pKa = 4.94 RR179 pKa = 11.84 SIIAAMEE186 pKa = 4.47 ADD188 pKa = 4.35 LSQGHH193 pKa = 5.2 QLIYY197 pKa = 10.25 VIPDD201 pKa = 2.57 IMMTIKK207 pKa = 10.64 DD208 pKa = 4.7 FYY210 pKa = 10.58 QHH212 pKa = 5.09 VQISILTKK220 pKa = 10.21 GYY222 pKa = 10.63 QGFQGEE228 pKa = 4.69 ANLLITRR235 pKa = 11.84 SCRR238 pKa = 11.84 CRR240 pKa = 11.84 LTNVPNVGFAYY251 pKa = 10.49 NIQKK255 pKa = 9.6 VVEE258 pKa = 4.01 YY259 pKa = 10.54 LNSKK263 pKa = 8.35 GVKK266 pKa = 9.99 AIQAQKK272 pKa = 11.0 LSTKK276 pKa = 9.93 KK277 pKa = 10.5 FQGTEE282 pKa = 3.86 WNIKK286 pKa = 8.24 PSNVVVPMQPASMITRR302 pKa = 11.84 VNYY305 pKa = 10.16 DD306 pKa = 2.78 SSRR309 pKa = 11.84 SIRR312 pKa = 11.84 FGDD315 pKa = 3.9 YY316 pKa = 9.83 QASTSTAPPRR326 pKa = 11.84 YY327 pKa = 10.03 NNDD330 pKa = 2.99 GDD332 pKa = 4.09 SDD334 pKa = 5.0 DD335 pKa = 5.48 EE336 pKa = 4.23 IQEE339 pKa = 4.54 TINMLYY345 pKa = 9.91 IEE347 pKa = 5.95 DD348 pKa = 4.92 DD349 pKa = 4.23 LEE351 pKa = 6.26 DD352 pKa = 5.15 DD353 pKa = 3.89 YY354 pKa = 11.76 PAAEE358 pKa = 4.23 EE359 pKa = 4.11 EE360 pKa = 4.36 QVLLEE365 pKa = 4.39 DD366 pKa = 3.83 MVGEE370 pKa = 4.09 EE371 pKa = 4.9 DD372 pKa = 4.29 IISKK376 pKa = 10.14 FLEE379 pKa = 4.17 EE380 pKa = 5.57 LEE382 pKa = 5.67 LSDD385 pKa = 6.39 DD386 pKa = 3.9 DD387 pKa = 4.38 TKK389 pKa = 11.56 SQVSQQVMNLEE400 pKa = 4.44 EE401 pKa = 4.18 EE402 pKa = 4.98 DD403 pKa = 4.29 FPQLQEE409 pKa = 3.89 IEE411 pKa = 4.49 RR412 pKa = 11.84 LLSTTAEE419 pKa = 4.38 SAISSYY425 pKa = 10.68 RR426 pKa = 11.84 PPDD429 pKa = 3.08 VDD431 pKa = 3.26 MSGIAPGYY439 pKa = 10.61 APATSTTGWAGNNQFPFTTRR459 pKa = 11.84 RR460 pKa = 11.84 PRR462 pKa = 11.84 RR463 pKa = 11.84 WDD465 pKa = 3.46 SNNEE469 pKa = 3.8 FYY471 pKa = 10.49 MLPPAQSKK479 pKa = 9.47 QGAMFIMPLDD489 pKa = 3.72 FDD491 pKa = 4.25 VKK493 pKa = 10.86 VFEE496 pKa = 4.27 RR497 pKa = 11.84 WEE499 pKa = 4.64 SITLLHH505 pKa = 4.95 MTEE508 pKa = 4.36 RR509 pKa = 11.84 SFDD512 pKa = 3.69 NADD515 pKa = 3.14 DD516 pKa = 3.58 KK517 pKa = 10.96 MRR519 pKa = 11.84 YY520 pKa = 8.08 MEE522 pKa = 4.59 NLLGEE527 pKa = 4.43 DD528 pKa = 3.73 EE529 pKa = 4.49 KK530 pKa = 11.66 KK531 pKa = 10.28 HH532 pKa = 5.64 FIEE535 pKa = 3.81 WRR537 pKa = 11.84 MKK539 pKa = 8.98 YY540 pKa = 4.93 TTEE543 pKa = 4.11 YY544 pKa = 9.98 EE545 pKa = 4.28 TMKK548 pKa = 10.85 AQALGDD554 pKa = 3.54 QGTQNIINQMRR565 pKa = 11.84 LIFFLEE571 pKa = 4.15 NPQVGTTTSQDD582 pKa = 3.05 AAYY585 pKa = 6.99 KK586 pKa = 8.15 TLKK589 pKa = 10.83 SLVCTEE595 pKa = 4.07 MTDD598 pKa = 3.54 TAIYY602 pKa = 10.14 RR603 pKa = 11.84 YY604 pKa = 9.49 MNDD607 pKa = 3.44 YY608 pKa = 10.64 FHH610 pKa = 7.25 LSAKK614 pKa = 9.27 TGRR617 pKa = 11.84 AWATEE622 pKa = 4.0 EE623 pKa = 3.79 LSKK626 pKa = 11.26 EE627 pKa = 4.21 FFTKK631 pKa = 10.66 LPRR634 pKa = 11.84 GLGDD638 pKa = 3.51 EE639 pKa = 4.2 VEE641 pKa = 4.31 KK642 pKa = 11.04 AFKK645 pKa = 10.08 EE646 pKa = 3.96 KK647 pKa = 10.65 HH648 pKa = 5.4 PSNTIGVTARR658 pKa = 11.84 ITFTKK663 pKa = 10.16 RR664 pKa = 11.84 YY665 pKa = 9.58 LKK667 pKa = 10.02 EE668 pKa = 3.84 LCEE671 pKa = 4.2 KK672 pKa = 10.69 VALQKK677 pKa = 11.06 SIGKK681 pKa = 8.63 MDD683 pKa = 4.15 FCRR686 pKa = 11.84 NTPVHH691 pKa = 6.06 GLYY694 pKa = 10.66 GRR696 pKa = 11.84 EE697 pKa = 3.82 RR698 pKa = 11.84 SHH700 pKa = 6.68 KK701 pKa = 10.01 RR702 pKa = 11.84 YY703 pKa = 9.33 GARR706 pKa = 11.84 KK707 pKa = 6.94 STSYY711 pKa = 10.32 KK712 pKa = 10.06 GKK714 pKa = 7.78 PHH716 pKa = 6.95 KK717 pKa = 10.5 SHH719 pKa = 6.5 VRR721 pKa = 11.84 IGKK724 pKa = 9.33 KK725 pKa = 9.36 KK726 pKa = 9.57 HH727 pKa = 4.46 LAARR731 pKa = 11.84 KK732 pKa = 9.43 RR733 pKa = 11.84 NCRR736 pKa = 11.84 CYY738 pKa = 9.51 ACGEE742 pKa = 4.2 EE743 pKa = 4.2 GHH745 pKa = 6.4 FASEE749 pKa = 4.19 CTNQKK754 pKa = 10.48 KK755 pKa = 10.37 IIDD758 pKa = 3.92 RR759 pKa = 11.84 VRR761 pKa = 11.84 VLDD764 pKa = 4.52 SLDD767 pKa = 4.34 LEE769 pKa = 5.4 DD770 pKa = 5.06 GLDD773 pKa = 3.67 VVSVGFDD780 pKa = 3.33 EE781 pKa = 6.6 DD782 pKa = 4.33 DD783 pKa = 3.5 VSDD786 pKa = 3.85 IYY788 pKa = 11.46 SIDD791 pKa = 3.6 EE792 pKa = 3.76 EE793 pKa = 4.52 AEE795 pKa = 4.01 NNKK798 pKa = 7.86 FTNEE802 pKa = 3.81 DD803 pKa = 3.26 MEE805 pKa = 4.73 DD806 pKa = 3.38 FKK808 pKa = 11.62 NYY810 pKa = 8.3 EE811 pKa = 4.08 VYY813 pKa = 10.5 MMEE816 pKa = 5.01 AEE818 pKa = 4.35 EE819 pKa = 4.28 LDD821 pKa = 3.77 EE822 pKa = 4.63 PKK824 pKa = 10.33 EE825 pKa = 4.01 YY826 pKa = 10.87 LVGEE830 pKa = 4.01 PSEE833 pKa = 4.3 WRR835 pKa = 11.84 SKK837 pKa = 9.56 MRR839 pKa = 11.84 VSRR842 pKa = 11.84 RR843 pKa = 11.84 QYY845 pKa = 9.31 YY846 pKa = 9.96 CKK848 pKa = 10.11 HH849 pKa = 5.73 DD850 pKa = 3.35 WKK852 pKa = 10.95 FEE854 pKa = 3.94 EE855 pKa = 4.18 SHH857 pKa = 5.77 RR858 pKa = 11.84 TICRR862 pKa = 11.84 ACGSEE867 pKa = 3.87 AVHH870 pKa = 6.45 KK871 pKa = 10.51 HH872 pKa = 6.43 RR873 pKa = 11.84 IDD875 pKa = 3.85 CLKK878 pKa = 10.66 CDD880 pKa = 3.45 MTICLMCQPWFYY892 pKa = 11.43 KK893 pKa = 10.4 DD894 pKa = 3.04 INTEE898 pKa = 4.06 EE899 pKa = 4.19 VKK901 pKa = 9.39 KK902 pKa = 9.07 TRR904 pKa = 11.84 VRR906 pKa = 11.84 IEE908 pKa = 4.09 RR909 pKa = 11.84 VIDD912 pKa = 3.27 WKK914 pKa = 10.98 EE915 pKa = 3.25 IALRR919 pKa = 11.84 QHH921 pKa = 6.32 EE922 pKa = 4.37 VLKK925 pKa = 10.34 TSIANEE931 pKa = 3.95 KK932 pKa = 9.74 QLSEE936 pKa = 4.22 EE937 pKa = 4.0 NEE939 pKa = 3.95 EE940 pKa = 3.94 LKK942 pKa = 11.07 EE943 pKa = 4.34 KK944 pKa = 10.56 IKK946 pKa = 10.28 EE947 pKa = 4.14 LKK949 pKa = 10.18 GKK951 pKa = 8.9 EE952 pKa = 4.16 LITVEE957 pKa = 4.54 EE958 pKa = 4.09 ISEE961 pKa = 4.2 EE962 pKa = 3.78 EE963 pKa = 3.94 GAAMIEE969 pKa = 4.25 KK970 pKa = 10.02 IEE972 pKa = 3.97 NLEE975 pKa = 4.55 KK976 pKa = 11.01 EE977 pKa = 4.34 NEE979 pKa = 4.12 LLNAIITQKK988 pKa = 10.71 EE989 pKa = 4.17 EE990 pKa = 4.24 EE991 pKa = 4.23 EE992 pKa = 3.91 VGYY995 pKa = 10.63 LNKK998 pKa = 10.04 IQEE1001 pKa = 4.21 LEE1003 pKa = 3.74 EE1004 pKa = 4.63 RR1005 pKa = 11.84 IRR1007 pKa = 11.84 KK1008 pKa = 9.17 LEE1010 pKa = 3.78 QQMKK1014 pKa = 10.12 YY1015 pKa = 9.87 RR1016 pKa = 11.84 DD1017 pKa = 3.57 EE1018 pKa = 4.11 EE1019 pKa = 4.07 MQVILKK1025 pKa = 7.3 QQRR1028 pKa = 11.84 EE1029 pKa = 4.25 EE1030 pKa = 3.99 KK1031 pKa = 10.68 VNALEE1036 pKa = 4.07 EE1037 pKa = 4.29 VSVNALRR1044 pKa = 11.84 PRR1046 pKa = 11.84 NNHH1049 pKa = 5.32 LNIRR1053 pKa = 11.84 CEE1055 pKa = 4.0 VEE1057 pKa = 3.71 IKK1059 pKa = 9.79 EE1060 pKa = 4.52 KK1061 pKa = 10.83 KK1062 pKa = 10.27 VILNAILDD1070 pKa = 3.92 TGATVCVADD1079 pKa = 3.97 SRR1081 pKa = 11.84 MIPAEE1086 pKa = 3.72 MRR1088 pKa = 11.84 EE1089 pKa = 3.93 QAKK1092 pKa = 10.07 NRR1094 pKa = 11.84 IIIRR1098 pKa = 11.84 GVNGVTEE1105 pKa = 4.41 VNEE1108 pKa = 3.86 VTAIGRR1114 pKa = 11.84 LWVGKK1119 pKa = 8.01 QWFTLPQTFIMPTLGDD1135 pKa = 4.17 GVHH1138 pKa = 6.55 MIIGMNFIRR1147 pKa = 11.84 TVGLRR1152 pKa = 11.84 IEE1154 pKa = 4.32 NGEE1157 pKa = 3.99 VTIYY1161 pKa = 10.87 KK1162 pKa = 10.27 IMTTVPAPPIAHH1174 pKa = 7.08 DD1175 pKa = 3.92 LNYY1178 pKa = 9.94 IEE1180 pKa = 4.94 EE1181 pKa = 4.9 LEE1183 pKa = 4.35 LEE1185 pKa = 4.28 LYY1187 pKa = 10.02 EE1188 pKa = 5.0 YY1189 pKa = 11.61 YY1190 pKa = 10.55 DD1191 pKa = 3.01 ICATQNQRR1199 pKa = 11.84 GEE1201 pKa = 3.88 IAEE1204 pKa = 4.16 EE1205 pKa = 4.34 FIEE1208 pKa = 4.28 PAMMTRR1214 pKa = 11.84 MKK1216 pKa = 10.46 KK1217 pKa = 9.95 LGYY1220 pKa = 9.79 IGEE1223 pKa = 4.46 EE1224 pKa = 4.14 PLKK1227 pKa = 10.58 HH1228 pKa = 4.31 WTKK1231 pKa = 10.73 NQVKK1235 pKa = 10.05 CRR1237 pKa = 11.84 IEE1239 pKa = 4.23 VKK1241 pKa = 10.49 NPDD1244 pKa = 4.22 MIIEE1248 pKa = 4.57 DD1249 pKa = 4.18 KK1250 pKa = 10.36 PLKK1253 pKa = 10.44 HH1254 pKa = 5.57 VTPAMKK1260 pKa = 9.19 EE1261 pKa = 3.99 TMAKK1265 pKa = 9.8 HH1266 pKa = 4.87 VKK1268 pKa = 10.0 KK1269 pKa = 10.63 LLEE1272 pKa = 4.3 LKK1274 pKa = 10.36 VIRR1277 pKa = 11.84 PSQSKK1282 pKa = 9.94 HH1283 pKa = 4.34 RR1284 pKa = 11.84 TTAMIVEE1291 pKa = 4.87 SGTEE1295 pKa = 3.66 IDD1297 pKa = 3.89 PVTGKK1302 pKa = 10.11 EE1303 pKa = 3.92 KK1304 pKa = 10.32 RR1305 pKa = 11.84 GKK1307 pKa = 9.58 EE1308 pKa = 3.61 RR1309 pKa = 11.84 LVFNYY1314 pKa = 9.57 KK1315 pKa = 10.11 RR1316 pKa = 11.84 LNDD1319 pKa = 3.67 NTEE1322 pKa = 3.67 KK1323 pKa = 10.83 DD1324 pKa = 3.75 QYY1326 pKa = 10.96 SLPGINTIIKK1336 pKa = 10.24 RR1337 pKa = 11.84 IGNAKK1342 pKa = 9.8 IYY1344 pKa = 10.9 SKK1346 pKa = 11.13 FDD1348 pKa = 3.67 LKK1350 pKa = 11.29 SGFHH1354 pKa = 5.22 QVAMDD1359 pKa = 4.23 PEE1361 pKa = 5.07 SIPWTAFWAIDD1372 pKa = 3.73 GLYY1375 pKa = 9.3 EE1376 pKa = 4.03 WLVMPFGLKK1385 pKa = 9.4 NAPAIFQRR1393 pKa = 11.84 KK1394 pKa = 7.12 MDD1396 pKa = 3.39 NCFRR1400 pKa = 11.84 GTEE1403 pKa = 4.02 KK1404 pKa = 10.81 FIAVYY1409 pKa = 10.17 IDD1411 pKa = 4.94 DD1412 pKa = 3.91 ILVFSEE1418 pKa = 4.25 TVQQHH1423 pKa = 5.88 KK1424 pKa = 10.18 EE1425 pKa = 3.8 HH1426 pKa = 6.6 LKK1428 pKa = 10.62 KK1429 pKa = 10.85 FMEE1432 pKa = 4.16 ICEE1435 pKa = 4.21 RR1436 pKa = 11.84 NGLVLSPTKK1445 pKa = 10.24 MKK1447 pKa = 10.38 IGTRR1451 pKa = 11.84 QVDD1454 pKa = 3.76 FLGATIGNSKK1464 pKa = 10.14 IKK1466 pKa = 9.88 LQPHH1470 pKa = 7.56 IIQKK1474 pKa = 9.81 IAEE1477 pKa = 4.39 TKK1479 pKa = 10.69 DD1480 pKa = 3.28 EE1481 pKa = 4.13 EE1482 pKa = 4.38 LKK1484 pKa = 10.74 EE1485 pKa = 4.07 FRR1487 pKa = 11.84 GLRR1490 pKa = 11.84 RR1491 pKa = 11.84 WLGILNYY1498 pKa = 9.89 ARR1500 pKa = 11.84 SYY1502 pKa = 10.64 IPNLGKK1508 pKa = 10.15 ILGPLYY1514 pKa = 11.0 SKK1516 pKa = 9.39 TNPNGEE1522 pKa = 3.69 RR1523 pKa = 11.84 RR1524 pKa = 11.84 MNRR1527 pKa = 11.84 QDD1529 pKa = 2.84 WVIVDD1534 pKa = 4.42 KK1535 pKa = 11.29 IKK1537 pKa = 11.18 DD1538 pKa = 3.67 LVKK1541 pKa = 10.67 NLPEE1545 pKa = 5.89 LEE1547 pKa = 4.53 LPPNNAMMIIEE1558 pKa = 4.59 TDD1560 pKa = 2.97 GCMEE1564 pKa = 4.22 GWGGVCKK1571 pKa = 10.15 WKK1573 pKa = 10.05 EE1574 pKa = 3.74 QSGQPRR1580 pKa = 11.84 WSEE1583 pKa = 4.17 KK1584 pKa = 8.63 ICAYY1588 pKa = 10.58 ASGKK1592 pKa = 9.96 FNPIKK1597 pKa = 10.16 STIDD1601 pKa = 3.27 AEE1603 pKa = 4.13 IQAVINSLDD1612 pKa = 3.29 KK1613 pKa = 11.18 FKK1615 pKa = 10.59 IYY1617 pKa = 10.95 YY1618 pKa = 9.68 LDD1620 pKa = 3.61 KK1621 pKa = 10.97 KK1622 pKa = 10.28 EE1623 pKa = 4.46 LIIRR1627 pKa = 11.84 TDD1629 pKa = 2.97 SQAIVSFYY1637 pKa = 10.95 KK1638 pKa = 10.42 KK1639 pKa = 10.63 SSDD1642 pKa = 3.33 HH1643 pKa = 6.17 KK1644 pKa = 9.16 PSRR1647 pKa = 11.84 VRR1649 pKa = 11.84 WLAFTDD1655 pKa = 4.34 YY1656 pKa = 10.03 ITGTGLDD1663 pKa = 3.48 VKK1665 pKa = 10.84 FEE1667 pKa = 5.01 HH1668 pKa = 7.43 IDD1670 pKa = 3.45 GKK1672 pKa = 10.97 DD1673 pKa = 3.2 NVLADD1678 pKa = 3.64 TLSRR1682 pKa = 11.84 LVKK1685 pKa = 10.27 IICHH1689 pKa = 5.63 KK1690 pKa = 10.02 EE1691 pKa = 3.56 KK1692 pKa = 10.76 HH1693 pKa = 5.84 PSEE1696 pKa = 4.59 TILINVAEE1704 pKa = 5.08 EE1705 pKa = 3.89 ILQKK1709 pKa = 11.08 GSIGAKK1715 pKa = 9.39 RR1716 pKa = 11.84 KK1717 pKa = 9.24 LGEE1720 pKa = 4.27 MISGYY1725 pKa = 7.21 EE1726 pKa = 3.47 AWMTRR1731 pKa = 11.84 IQEE1734 pKa = 4.27 HH1735 pKa = 6.63 KK1736 pKa = 10.4 IKK1738 pKa = 9.75 TLTLIEE1744 pKa = 4.43 KK1745 pKa = 10.05 PIFKK1749 pKa = 10.22 CGCRR1753 pKa = 11.84 KK1754 pKa = 9.1 PARR1757 pKa = 11.84 LHH1759 pKa = 5.26 TSRR1762 pKa = 11.84 TSRR1765 pKa = 11.84 NPGRR1769 pKa = 11.84 EE1770 pKa = 3.94 FYY1772 pKa = 10.89 SCEE1775 pKa = 3.73 NKK1777 pKa = 10.69 ACFTWVWKK1785 pKa = 10.15 DD1786 pKa = 3.48 QIDD1789 pKa = 4.15 EE1790 pKa = 4.28 YY1791 pKa = 10.39 VQEE1794 pKa = 4.12 VMTWNDD1800 pKa = 3.08 QVSQLSEE1807 pKa = 3.97 EE1808 pKa = 4.5 PEE1810 pKa = 4.12 GHH1812 pKa = 6.53 NEE1814 pKa = 3.73 GCTIEE1819 pKa = 5.09 DD1820 pKa = 3.84 AFDD1823 pKa = 4.57 LLDD1826 pKa = 4.82 VSNDD1830 pKa = 3.77 DD1831 pKa = 2.84 QWARR1835 pKa = 11.84 SS1836 pKa = 3.52
Molecular weight: 212.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.794
IPC2_protein 5.804
IPC_protein 5.842
Toseland 6.135
ProMoST 6.148
Dawson 6.059
Bjellqvist 6.084
Wikipedia 6.033
Rodwell 6.033
Grimsley 6.249
Solomon 6.059
Lehninger 6.046
Nozaki 6.3
DTASelect 6.478
Thurlkill 6.465
EMBOSS 6.427
Sillero 6.402
Patrickios 4.355
IPC_peptide 6.071
IPC2_peptide 6.351
IPC2.peptide.svr19 6.408
Protein with the highest isoelectric point:
>tr|F5AY30|F5AY30_9VIRU Reverse transcriptase OS=Banana streak CA virus OX=1016852 PE=4 SV=1
MM1 pKa = 7.56 SNTVTNSAIYY11 pKa = 9.31 QQAITGTTGDD21 pKa = 3.64 WEE23 pKa = 4.7 SPGVGIAEE31 pKa = 4.46 KK32 pKa = 10.63 GSVSNTQITRR42 pKa = 11.84 QLNTVIYY49 pKa = 9.82 LIVRR53 pKa = 11.84 LQQEE57 pKa = 4.1 NLALKK62 pKa = 9.19 DD63 pKa = 3.81 TIADD67 pKa = 3.19 IQNRR71 pKa = 11.84 VKK73 pKa = 10.18 TIEE76 pKa = 4.43 GKK78 pKa = 10.59 SGTTSSGTPTLKK90 pKa = 10.73 SEE92 pKa = 4.28 IDD94 pKa = 3.87 SINNKK99 pKa = 7.04 LTRR102 pKa = 11.84 IEE104 pKa = 4.18 QIKK107 pKa = 10.52 SSQPKK112 pKa = 9.49 KK113 pKa = 10.71 DD114 pKa = 3.48 SGTSAAKK121 pKa = 10.38 VFQDD125 pKa = 4.19 PYY127 pKa = 11.34 NLLRR131 pKa = 11.84 NLKK134 pKa = 9.99
Molecular weight: 14.58 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.776
IPC2_protein 8.785
IPC_protein 8.756
Toseland 9.648
ProMoST 9.385
Dawson 9.823
Bjellqvist 9.428
Wikipedia 9.955
Rodwell 10.35
Grimsley 9.882
Solomon 9.897
Lehninger 9.867
Nozaki 9.589
DTASelect 9.443
Thurlkill 9.677
EMBOSS 10.043
Sillero 9.736
Patrickios 9.999
IPC_peptide 9.897
IPC2_peptide 7.819
IPC2.peptide.svr19 7.723
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2146
134
1836
715.3
82.58
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.266 ± 0.611
1.445 ± 0.722
5.499 ± 0.441
9.832 ± 1.525
2.936 ± 0.732
5.126 ± 1.069
1.957 ± 0.598
7.502 ± 0.979
7.968 ± 0.578
7.875 ± 2.593
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.982 ± 1.014
4.753 ± 0.746
3.448 ± 0.808
4.8 ± 1.468
6.431 ± 0.864
5.685 ± 1.38
6.151 ± 1.594
5.685 ± 0.134
1.445 ± 0.253
3.215 ± 0.641
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here