Canine adenovirus serotype 2 (CAdV-2) (Canine adenovirus 2)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Canine mastadenovirus A

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q76SA8|Q76SA8_ADEC2 Putative E3 region ORF2 OS=Canine adenovirus serotype 2 OX=10514 PE=4 SV=1
MM1 pKa = 7.47AALGVSMGACFCLRR15 pKa = 11.84LHH17 pKa = 6.58KK18 pKa = 10.81SLVEE22 pKa = 4.16SVCAQLEE29 pKa = 4.39LTDD32 pKa = 4.45FLPSEE37 pKa = 4.18LRR39 pKa = 11.84RR40 pKa = 11.84VVFSLIRR47 pKa = 11.84AQEE50 pKa = 3.92VRR52 pKa = 11.84PCPTFAAAVSVLSGDD67 pKa = 3.54YY68 pKa = 11.26LEE70 pKa = 5.63FYY72 pKa = 10.85LFIGSDD78 pKa = 3.58TEE80 pKa = 4.61GFGSVADD87 pKa = 3.84IQATAVSLQEE97 pKa = 3.52ALRR100 pKa = 11.84RR101 pKa = 11.84DD102 pKa = 4.24FCQLIPEE109 pKa = 4.75DD110 pKa = 4.32CAHH113 pKa = 7.02LALGLSVTWEE123 pKa = 3.86PNILVTAEE131 pKa = 3.71

Molecular weight: 14.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|P87562|P87562_ADEC2 Hexon protein OS=Canine adenovirus serotype 2 OX=10514 GN=L3 PE=2 SV=1
MM1 pKa = 7.77AGRR4 pKa = 11.84NVTLRR9 pKa = 11.84LRR11 pKa = 11.84VPVRR15 pKa = 11.84TKK17 pKa = 9.3ITGAGRR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84GRR27 pKa = 11.84RR28 pKa = 11.84PRR30 pKa = 11.84GIRR33 pKa = 11.84CGRR36 pKa = 11.84MRR38 pKa = 11.84GGFLPALIPLIAAAIGAVPGIASVALQAARR68 pKa = 11.84HH69 pKa = 4.96

Molecular weight: 7.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

1

17

5895

55

905

346.8

38.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.871 ± 0.402

1.425 ± 0.344

4.36 ± 0.25

6.378 ± 0.725

4.224 ± 0.321

5.7 ± 0.338

2.358 ± 0.226

4.139 ± 0.29

4.224 ± 0.56

9.5 ± 0.566

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.884 ± 0.163

5.327 ± 0.633

6.429 ± 0.423

4.122 ± 0.328

6.497 ± 0.874

7.226 ± 0.365

5.818 ± 0.308

7.023 ± 0.358

1.187 ± 0.121

3.308 ± 0.493
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski