Rousettus aegyptiacus papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Psipapillomavirus; Psipapillomavirus 1

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q0QII1|Q0QII1_9PAPI Protein E6 OS=Rousettus aegyptiacus papillomavirus 1 OX=369584 GN=E6 PE=3 SV=1
MM1 pKa = 8.02RR2 pKa = 11.84GRR4 pKa = 11.84DD5 pKa = 3.61PSLEE9 pKa = 3.76LAAAAEE15 pKa = 4.34EE16 pKa = 4.39VQAVDD21 pKa = 3.54LHH23 pKa = 7.8CDD25 pKa = 3.17EE26 pKa = 5.91SLDD29 pKa = 4.66QEE31 pKa = 5.29AEE33 pKa = 3.79QQTFYY38 pKa = 11.23NIQLPCTSCEE48 pKa = 3.3RR49 pKa = 11.84HH50 pKa = 4.9MRR52 pKa = 11.84LVISCSSSGLRR63 pKa = 11.84TLAVLLRR70 pKa = 11.84QRR72 pKa = 11.84EE73 pKa = 4.15VQLICAQCTRR83 pKa = 11.84EE84 pKa = 3.84FHH86 pKa = 6.54

Molecular weight: 9.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q0QIH9|Q0QIH9_9PAPI Replication protein E1 OS=Rousettus aegyptiacus papillomavirus 1 OX=369584 GN=E1 PE=3 SV=1
MM1 pKa = 6.94EE2 pKa = 4.74TLRR5 pKa = 11.84DD6 pKa = 3.87RR7 pKa = 11.84LDD9 pKa = 3.39VLQDD13 pKa = 3.47QILGHH18 pKa = 5.81YY19 pKa = 7.6EE20 pKa = 3.9RR21 pKa = 11.84QSTCLQDD28 pKa = 4.14HH29 pKa = 4.87VQYY32 pKa = 9.77WGLVRR37 pKa = 11.84RR38 pKa = 11.84EE39 pKa = 3.97SSLLFYY45 pKa = 11.15ARR47 pKa = 11.84GKK49 pKa = 9.63GVKK52 pKa = 8.53TLGYY56 pKa = 10.33LPVPVQQVSQDD67 pKa = 3.28RR68 pKa = 11.84ARR70 pKa = 11.84QAIQLHH76 pKa = 6.69LATQSLAKK84 pKa = 9.93SKK86 pKa = 11.22YY87 pKa = 9.53KK88 pKa = 10.54DD89 pKa = 3.96EE90 pKa = 4.52PWTLQDD96 pKa = 3.46VSRR99 pKa = 11.84EE100 pKa = 4.02NYY102 pKa = 8.98MSEE105 pKa = 4.04PKK107 pKa = 9.13HH108 pKa = 4.91TFKK111 pKa = 11.03KK112 pKa = 10.49GGTQVEE118 pKa = 4.62VIYY121 pKa = 11.09DD122 pKa = 3.64GDD124 pKa = 3.83EE125 pKa = 4.55DD126 pKa = 4.79NVMLYY131 pKa = 9.54TSWEE135 pKa = 4.09HH136 pKa = 8.36IYY138 pKa = 10.51IQDD141 pKa = 5.6DD142 pKa = 3.55DD143 pKa = 4.97GSWYY147 pKa = 9.47KK148 pKa = 10.62RR149 pKa = 11.84KK150 pKa = 10.73GEE152 pKa = 4.04VCVEE156 pKa = 3.66GLYY159 pKa = 8.21YY160 pKa = 10.22TWLGQKK166 pKa = 7.79TFYY169 pKa = 11.51VNFEE173 pKa = 4.28EE174 pKa = 4.9EE175 pKa = 4.02LGKK178 pKa = 10.96YY179 pKa = 7.11STRR182 pKa = 11.84NVYY185 pKa = 8.39VVRR188 pKa = 11.84TADD191 pKa = 3.55GEE193 pKa = 4.39LMSFNPVTSSTPQEE207 pKa = 4.38EE208 pKa = 4.85GQQPGGGAPGHH219 pKa = 6.76PGPPPRR225 pKa = 11.84KK226 pKa = 8.45RR227 pKa = 11.84RR228 pKa = 11.84RR229 pKa = 11.84LFGEE233 pKa = 4.51KK234 pKa = 9.38PAEE237 pKa = 4.39GPGGRR242 pKa = 11.84RR243 pKa = 11.84VPVPRR248 pKa = 11.84PGGPPPGRR256 pKa = 11.84RR257 pKa = 11.84GGEE260 pKa = 4.0TPSRR264 pKa = 11.84GTEE267 pKa = 3.82RR268 pKa = 11.84PAEE271 pKa = 4.18GSGGCIPPALPGAAGKK287 pKa = 8.19TEE289 pKa = 3.85EE290 pKa = 4.37RR291 pKa = 11.84GGAGFRR297 pKa = 11.84PQPPTAVVAPVIIIAGPPNALKK319 pKa = 10.08CQRR322 pKa = 11.84YY323 pKa = 8.82RR324 pKa = 11.84LQNQHH329 pKa = 5.57YY330 pKa = 8.98RR331 pKa = 11.84HH332 pKa = 6.33FAQVTTTYY340 pKa = 9.54HH341 pKa = 6.15WLDD344 pKa = 3.43AGHH347 pKa = 5.15TQRR350 pKa = 11.84RR351 pKa = 11.84SAAQIVLRR359 pKa = 11.84FVDD362 pKa = 3.86TAQRR366 pKa = 11.84EE367 pKa = 4.55TFLNTGALSDD377 pKa = 3.63RR378 pKa = 11.84VHH380 pKa = 6.14YY381 pKa = 10.8VLGTMPFLSS390 pKa = 3.86

Molecular weight: 43.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2507

86

665

358.1

39.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.781 ± 0.499

2.074 ± 0.472

6.143 ± 0.432

6.502 ± 0.44

3.151 ± 0.332

8.456 ± 0.571

2.513 ± 0.26

4.428 ± 0.662

3.949 ± 0.54

8.217 ± 0.551

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.034 ± 0.363

3.032 ± 0.632

7.06 ± 0.94

4.826 ± 0.658

6.781 ± 0.641

6.661 ± 0.734

5.943 ± 0.585

7.06 ± 0.468

1.197 ± 0.205

3.191 ± 0.356
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski