Penicillium stoloniferum virus S

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Gammapartitivirus

Average proteome isoelectric point is 7.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6YDQ7|Q6YDQ7_9VIRU RNA-dependent RNA polymerase OS=Penicillium stoloniferum virus S OX=216371 PE=4 SV=2
MM1 pKa = 7.51SSIAPTDD8 pKa = 3.89SVSSSGKK15 pKa = 8.95RR16 pKa = 11.84SKK18 pKa = 10.08PGKK21 pKa = 9.7RR22 pKa = 11.84EE23 pKa = 3.7RR24 pKa = 11.84QQARR28 pKa = 11.84SAVGSAGGKK37 pKa = 8.09PASASKK43 pKa = 10.42AAAFAQGGSSDD54 pKa = 4.2PVPMPGKK61 pKa = 9.55YY62 pKa = 9.27PVVFSTGAGEE72 pKa = 3.96PTRR75 pKa = 11.84DD76 pKa = 3.34QEE78 pKa = 4.59FALPVHH84 pKa = 6.38KK85 pKa = 10.51AFPLFGSVSDD95 pKa = 3.79KK96 pKa = 10.51YY97 pKa = 10.86RR98 pKa = 11.84RR99 pKa = 11.84NPRR102 pKa = 11.84YY103 pKa = 10.13AEE105 pKa = 4.01FRR107 pKa = 11.84AHH109 pKa = 7.24SEE111 pKa = 3.85FTDD114 pKa = 4.5GVFGTHH120 pKa = 6.65LAVSSLLRR128 pKa = 11.84LAQQLVHH135 pKa = 6.26AHH137 pKa = 5.26VNMGLPLGDD146 pKa = 4.44FAPLASSDD154 pKa = 3.46VRR156 pKa = 11.84IPSALASVVNQFGEE170 pKa = 4.48FSSPSIGTRR179 pKa = 11.84FLLRR183 pKa = 11.84DD184 pKa = 3.45YY185 pKa = 9.6EE186 pKa = 4.44HH187 pKa = 6.79AVSRR191 pKa = 11.84VVFLADD197 pKa = 3.8QLWTNGNSHH206 pKa = 7.21HH207 pKa = 6.5IFARR211 pKa = 11.84SWLPMSNNDD220 pKa = 3.6GNFKK224 pKa = 10.39TIVASRR230 pKa = 11.84LLEE233 pKa = 4.65FISAGDD239 pKa = 3.68LSILPTVLEE248 pKa = 4.33DD249 pKa = 3.41AVLSGEE255 pKa = 4.23VPEE258 pKa = 4.98AWEE261 pKa = 3.96QVKK264 pKa = 10.74DD265 pKa = 4.08LLGDD269 pKa = 3.7APGVGQVDD277 pKa = 3.11RR278 pKa = 11.84RR279 pKa = 11.84DD280 pKa = 3.44RR281 pKa = 11.84FDD283 pKa = 5.13FLFKK287 pKa = 10.7SYY289 pKa = 11.52ADD291 pKa = 3.29VGQFTTAFTTQAASDD306 pKa = 3.84VLTEE310 pKa = 6.13LGLPWNSPSAGHH322 pKa = 7.03LNWQYY327 pKa = 9.3STKK330 pKa = 10.3QRR332 pKa = 11.84FTFLADD338 pKa = 3.24TWAKK342 pKa = 10.61LSAAYY347 pKa = 10.16SQFFEE352 pKa = 4.74LSSGLATRR360 pKa = 11.84QSATGSHH367 pKa = 5.79AQMVDD372 pKa = 3.26LTSVEE377 pKa = 4.19GVTVLKK383 pKa = 10.71AALALSAPEE392 pKa = 4.39FSLAACFPPSCIFVGGITRR411 pKa = 11.84RR412 pKa = 11.84VVVTTSLSVSQRR424 pKa = 11.84ATEE427 pKa = 4.57FCQMDD432 pKa = 3.2WRR434 pKa = 5.42

Molecular weight: 46.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6YDQ7|Q6YDQ7_9VIRU RNA-dependent RNA polymerase OS=Penicillium stoloniferum virus S OX=216371 PE=4 SV=2
MM1 pKa = 7.81EE2 pKa = 6.64DD3 pKa = 3.67SPFDD7 pKa = 3.66PTLLDD12 pKa = 3.48VAVEE16 pKa = 4.08EE17 pKa = 4.37SHH19 pKa = 7.24LVDD22 pKa = 5.76DD23 pKa = 5.71SPLTPSNRR31 pKa = 11.84TRR33 pKa = 11.84GASYY37 pKa = 10.61GIISEE42 pKa = 4.51KK43 pKa = 10.35FSSPGLRR50 pKa = 11.84EE51 pKa = 3.35IARR54 pKa = 11.84YY55 pKa = 9.42GGYY58 pKa = 9.58SVYY61 pKa = 10.57SGQSNTDD68 pKa = 2.27AWIRR72 pKa = 11.84TTLKK76 pKa = 10.12EE77 pKa = 3.99FDD79 pKa = 3.29RR80 pKa = 11.84SVYY83 pKa = 10.91DD84 pKa = 4.61DD85 pKa = 3.2IYY87 pKa = 10.86GYY89 pKa = 7.49TRR91 pKa = 11.84RR92 pKa = 11.84PTGTLGMYY100 pKa = 10.6GSLLKK105 pKa = 10.71FSEE108 pKa = 4.48GKK110 pKa = 10.39NSFASLNRR118 pKa = 11.84VQRR121 pKa = 11.84KK122 pKa = 8.99SMINAISKK130 pKa = 9.92AKK132 pKa = 10.2KK133 pKa = 9.99AFKK136 pKa = 10.37LPYY139 pKa = 9.5QRR141 pKa = 11.84EE142 pKa = 3.99PLDD145 pKa = 3.08WHH147 pKa = 5.46EE148 pKa = 4.44VGRR151 pKa = 11.84HH152 pKa = 4.2FRR154 pKa = 11.84RR155 pKa = 11.84DD156 pKa = 3.05TSAGVSFMGQKK167 pKa = 10.24KK168 pKa = 9.61GDD170 pKa = 3.65VMEE173 pKa = 5.22EE174 pKa = 4.04IYY176 pKa = 10.96HH177 pKa = 5.05EE178 pKa = 4.4ARR180 pKa = 11.84WLGHH184 pKa = 5.84RR185 pKa = 11.84MKK187 pKa = 10.97QNGRR191 pKa = 11.84AKK193 pKa = 10.37FDD195 pKa = 3.77PSKK198 pKa = 10.71MRR200 pKa = 11.84FPPCLAGQRR209 pKa = 11.84GGMSEE214 pKa = 4.39ASDD217 pKa = 3.44PKK219 pKa = 10.64TRR221 pKa = 11.84LVWIYY226 pKa = 9.11PAEE229 pKa = 3.94MLAIEE234 pKa = 5.05GFYY237 pKa = 10.75APEE240 pKa = 4.22MYY242 pKa = 9.71HH243 pKa = 8.87AYY245 pKa = 9.47MDD247 pKa = 4.96DD248 pKa = 3.94PLSPMLNGKK257 pKa = 9.39SSQRR261 pKa = 11.84LYY263 pKa = 10.75TEE265 pKa = 4.47WTCGLRR271 pKa = 11.84DD272 pKa = 3.36GEE274 pKa = 4.33MLYY277 pKa = 11.21GLDD280 pKa = 4.39FSGFDD285 pKa = 3.33TKK287 pKa = 11.07VPAWLIRR294 pKa = 11.84VAFDD298 pKa = 3.86ILRR301 pKa = 11.84QNIRR305 pKa = 11.84WDD307 pKa = 3.36SFRR310 pKa = 11.84GEE312 pKa = 4.2KK313 pKa = 9.8VSKK316 pKa = 10.5RR317 pKa = 11.84DD318 pKa = 3.4AQKK321 pKa = 10.19WRR323 pKa = 11.84NVWDD327 pKa = 3.58GMVWYY332 pKa = 8.64FINTPILMPDD342 pKa = 2.41GRR344 pKa = 11.84MFRR347 pKa = 11.84KK348 pKa = 9.98YY349 pKa = 10.14RR350 pKa = 11.84GVPSGSWFTQMIDD363 pKa = 3.34SVVNYY368 pKa = 10.2ILVDD372 pKa = 3.46YY373 pKa = 10.57LAACQQCEE381 pKa = 3.73IRR383 pKa = 11.84ALRR386 pKa = 11.84VLGDD390 pKa = 3.57DD391 pKa = 3.83SAFRR395 pKa = 11.84SCDD398 pKa = 3.48PFSLDD403 pKa = 4.39LASHH407 pKa = 6.92DD408 pKa = 4.04AEE410 pKa = 4.35CVNMILHH417 pKa = 6.69PEE419 pKa = 3.98KK420 pKa = 10.75CEE422 pKa = 3.91KK423 pKa = 10.35TKK425 pKa = 11.24DD426 pKa = 3.27PTAFKK431 pKa = 11.03LLGTTYY437 pKa = 10.92RR438 pKa = 11.84NGRR441 pKa = 11.84PHH443 pKa = 7.54RR444 pKa = 11.84EE445 pKa = 3.68TNEE448 pKa = 3.71WFKK451 pKa = 11.1LALYY455 pKa = 9.01PEE457 pKa = 4.62SVVPSLQVSFTRR469 pKa = 11.84LIGLWIGGAMFDD481 pKa = 4.74SRR483 pKa = 11.84FCQFMEE489 pKa = 4.47YY490 pKa = 10.51YY491 pKa = 8.36QTCFPCPQEE500 pKa = 3.82GWFSKK505 pKa = 9.82DD506 pKa = 3.0QRR508 pKa = 11.84RR509 pKa = 11.84WLQVVYY515 pKa = 10.42GGKK518 pKa = 10.08APRR521 pKa = 11.84GWTTKK526 pKa = 10.44RR527 pKa = 11.84SLFWRR532 pKa = 11.84SIFYY536 pKa = 10.87VYY538 pKa = 10.99GG539 pKa = 3.59

Molecular weight: 62.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

973

434

539

486.5

54.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.119 ± 2.071

1.336 ± 0.421

5.755 ± 0.448

4.625 ± 0.462

6.064 ± 0.404

7.605 ± 0.152

1.953 ± 0.229

3.186 ± 0.726

4.419 ± 0.779

8.222 ± 0.499

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.672 ± 0.842

2.467 ± 0.106

5.447 ± 0.054

3.803 ± 0.376

7.091 ± 0.869

9.764 ± 1.448

5.139 ± 0.406

6.372 ± 1.105

2.467 ± 0.557

3.494 ± 1.229
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski