Tissierella creatinophila DSM 6911

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Tissierellia; Tissierellales; Tissierellaceae; Tissierella; Tissierella creatinophila

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2530 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1U7M6B6|A0A1U7M6B6_TISCR Uncharacterized protein OS=Tissierella creatinophila DSM 6911 OX=1123403 GN=TICRE_11350 PE=4 SV=1
MM1 pKa = 7.38KK2 pKa = 10.51KK3 pKa = 10.35EE4 pKa = 4.03IDD6 pKa = 3.59NHH8 pKa = 5.18EE9 pKa = 4.18HH10 pKa = 7.81DD11 pKa = 4.62EE12 pKa = 4.48NCNHH16 pKa = 6.47DD17 pKa = 4.2HH18 pKa = 6.02EE19 pKa = 6.57HH20 pKa = 6.06DD21 pKa = 3.87HH22 pKa = 6.53EE23 pKa = 5.14GEE25 pKa = 3.68IDD27 pKa = 3.83VIYY30 pKa = 9.36LTFEE34 pKa = 4.45DD35 pKa = 4.9DD36 pKa = 5.04EE37 pKa = 4.48EE38 pKa = 4.91VEE40 pKa = 4.36CQVLGVFEE48 pKa = 5.19VEE50 pKa = 4.1DD51 pKa = 3.62KK52 pKa = 11.07EE53 pKa = 4.63YY54 pKa = 10.62IALLPSDD61 pKa = 3.85EE62 pKa = 5.63DD63 pKa = 4.03EE64 pKa = 4.31ILLYY68 pKa = 10.17EE69 pKa = 4.41YY70 pKa = 10.64KK71 pKa = 10.87DD72 pKa = 3.4SDD74 pKa = 4.05EE75 pKa = 4.66EE76 pKa = 4.04FDD78 pKa = 5.77LIPIEE83 pKa = 4.42DD84 pKa = 4.12DD85 pKa = 3.87KK86 pKa = 11.73EE87 pKa = 4.47LEE89 pKa = 4.44LVSKK93 pKa = 10.65AYY95 pKa = 10.58FEE97 pKa = 4.76LFEE100 pKa = 6.87DD101 pKa = 4.7EE102 pKa = 5.89DD103 pKa = 4.03DD104 pKa = 4.59LEE106 pKa = 4.7YY107 pKa = 11.49GEE109 pKa = 4.53YY110 pKa = 10.58DD111 pKa = 3.48EE112 pKa = 6.13EE113 pKa = 4.38EE114 pKa = 4.1

Molecular weight: 13.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1U7M6G6|A0A1U7M6G6_TISCR Methylglyoxal synthase OS=Tissierella creatinophila DSM 6911 OX=1123403 GN=mgsA PE=3 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.67QPKK8 pKa = 8.76KK9 pKa = 7.46RR10 pKa = 11.84QRR12 pKa = 11.84SRR14 pKa = 11.84EE15 pKa = 3.65HH16 pKa = 6.35GFRR19 pKa = 11.84KK20 pKa = 10.0RR21 pKa = 11.84MRR23 pKa = 11.84TKK25 pKa = 10.23SGRR28 pKa = 11.84SIIKK32 pKa = 9.86ARR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.54GRR39 pKa = 11.84KK40 pKa = 8.97KK41 pKa = 9.66LTAA44 pKa = 4.2

Molecular weight: 5.43 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2530

0

2530

746299

29

2124

295.0

33.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.24 ± 0.055

0.764 ± 0.018

5.979 ± 0.034

8.045 ± 0.051

4.37 ± 0.037

6.571 ± 0.047

1.343 ± 0.02

10.252 ± 0.058

9.109 ± 0.047

9.386 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.644 ± 0.021

5.661 ± 0.04

2.917 ± 0.032

2.286 ± 0.022

3.713 ± 0.035

6.257 ± 0.033

4.922 ± 0.033

6.061 ± 0.04

0.661 ± 0.015

3.817 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski