Candidatus Bathyarchaeota archaeon

Taxonomy: cellular organisms; Archaea; TACK group; Candidatus Bathyarchaeota; unclassified Candidatus Bathyarchaeota

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2329 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U0RXR1|A0A2U0RXR1_9ARCH Uncharacterized protein OS=Candidatus Bathyarchaeota archaeon OX=2026714 GN=CW691_09435 PE=4 SV=1
MM1 pKa = 7.46QINKK5 pKa = 9.61KK6 pKa = 10.3LSTGLIVTLLALSTIAIAIPSAFAVVANLQAYY38 pKa = 6.49TAMGAPITGGTVGQSIRR55 pKa = 11.84VGGDD59 pKa = 2.87SAAAWALVQFYY70 pKa = 10.02WDD72 pKa = 3.61SPANKK77 pKa = 9.1IGEE80 pKa = 4.35VYY82 pKa = 10.99ADD84 pKa = 3.61GAGDD88 pKa = 3.87FLLTGITVPEE98 pKa = 4.27DD99 pKa = 3.16VAGNHH104 pKa = 6.09QILVNDD110 pKa = 3.8GTGNVALNSNINPKK124 pKa = 8.99LTISATKK131 pKa = 10.22ALPGDD136 pKa = 3.94SLAVTGSGFGDD147 pKa = 3.75EE148 pKa = 4.66VPVGIYY154 pKa = 10.27LGTITSVVTEE164 pKa = 4.55AVADD168 pKa = 4.26DD169 pKa = 5.39DD170 pKa = 5.61LDD172 pKa = 3.79EE173 pKa = 5.23SPVVKK178 pKa = 9.62GTVVLTVDD186 pKa = 3.34VTVDD190 pKa = 3.18GDD192 pKa = 3.46IGGTAVTGPATLTVTDD208 pKa = 4.62DD209 pKa = 4.11GEE211 pKa = 4.73GVLSGTLSDD220 pKa = 3.89VVVDD224 pKa = 4.2DD225 pKa = 4.41GVVVEE230 pKa = 5.06DD231 pKa = 4.74GEE233 pKa = 4.43VDD235 pKa = 3.51VTIVGTINYY244 pKa = 7.16ATGGIALSASGVDD257 pKa = 3.64SAAGTGTVLNIAVTIDD273 pKa = 4.32AIDD276 pKa = 3.49AAYY279 pKa = 10.18QYY281 pKa = 11.11AQYY284 pKa = 10.85EE285 pKa = 4.38VTPLGGITTSAAGSFAEE302 pKa = 4.85SILVPAIPVLSYY314 pKa = 11.7GNYY317 pKa = 10.02LDD319 pKa = 4.17TAIDD323 pKa = 3.8TDD325 pKa = 4.28GNTANPTPVASLSVDD340 pKa = 3.24YY341 pKa = 10.8YY342 pKa = 10.76ILVNPISGPAGITVTLSGRR361 pKa = 11.84IPANTVYY368 pKa = 10.51EE369 pKa = 4.13IRR371 pKa = 11.84LDD373 pKa = 3.55TTTIATGTSAADD385 pKa = 3.28TTYY388 pKa = 10.0TQTHH392 pKa = 6.02QISSFLSKK400 pKa = 9.3TAHH403 pKa = 5.52TFYY406 pKa = 11.16VVWGGTNTRR415 pKa = 11.84SATFTVTEE423 pKa = 4.3SPRR426 pKa = 11.84MALSSTSGMAGQVITISSVPGYY448 pKa = 9.11PFSAGADD455 pKa = 3.22LTLYY459 pKa = 10.7INGAVVNGTTIDD471 pKa = 3.71DD472 pKa = 3.83RR473 pKa = 11.84FGPTVAFGPASGTFTDD489 pKa = 5.38LEE491 pKa = 4.26FTIPALAPGVYY502 pKa = 10.06AIEE505 pKa = 4.76LVDD508 pKa = 4.22SYY510 pKa = 11.67GASTGTMYY518 pKa = 10.73TFTVVPTPEE527 pKa = 4.19TAVSMVGTVFYY538 pKa = 10.63PGDD541 pKa = 3.43TLAWSFSSTDD551 pKa = 3.41TVTVAPTVTVRR562 pKa = 11.84SPTGAVWWQGVWATTTSGPMTTVLYY587 pKa = 10.6QNQLFGGAHH596 pKa = 5.79ATLPSNAPLGSWNWTAVYY614 pKa = 9.13STGSAANVKK623 pKa = 8.85ATGLFSVMAAATLDD637 pKa = 3.7TVTTDD642 pKa = 3.41IADD645 pKa = 4.05LVDD648 pKa = 5.54DD649 pKa = 5.02ISDD652 pKa = 3.45ISDD655 pKa = 3.53DD656 pKa = 3.61VATINTNINNLEE668 pKa = 4.07DD669 pKa = 5.57LIDD672 pKa = 4.09ALEE675 pKa = 4.23VTVDD679 pKa = 3.26IPEE682 pKa = 4.46LTTLTNDD689 pKa = 3.09VASLKK694 pKa = 10.54VSVSALDD701 pKa = 3.69AVVTAVAGDD710 pKa = 3.75VATVDD715 pKa = 3.76TKK717 pKa = 10.87IGTLTGTITGIEE729 pKa = 4.15GNIATIEE736 pKa = 4.17TDD738 pKa = 3.23VGTLQADD745 pKa = 3.48ISDD748 pKa = 3.82VEE750 pKa = 4.67ANVDD754 pKa = 3.73STPAWIAVVLALVAAVAAIFAVITIRR780 pKa = 11.84QKK782 pKa = 10.44IAGG785 pKa = 3.82

Molecular weight: 79.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U0RZ30|A0A2U0RZ30_9ARCH Aspartate aminotransferase family protein OS=Candidatus Bathyarchaeota archaeon OX=2026714 GN=CW691_07835 PE=3 SV=1
MM1 pKa = 7.81RR2 pKa = 11.84LAKK5 pKa = 10.19AGKK8 pKa = 8.64EE9 pKa = 3.98KK10 pKa = 10.84KK11 pKa = 9.46PVPTWVIAKK20 pKa = 8.97TGGQVRR26 pKa = 11.84SNPKK30 pKa = 8.73RR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84WRR35 pKa = 11.84QRR37 pKa = 11.84KK38 pKa = 8.35IRR40 pKa = 11.84AA41 pKa = 3.38

Molecular weight: 4.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2329

0

2329

642103

25

1519

275.7

30.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.205 ± 0.047

1.285 ± 0.025

5.192 ± 0.046

6.588 ± 0.051

4.191 ± 0.039

6.954 ± 0.055

1.691 ± 0.023

7.18 ± 0.049

6.925 ± 0.074

9.303 ± 0.069

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.359 ± 0.024

4.462 ± 0.048

4.03 ± 0.031

3.071 ± 0.029

4.093 ± 0.043

6.475 ± 0.049

6.387 ± 0.061

7.878 ± 0.044

1.268 ± 0.025

3.462 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski