Beihai barnacle virus 11

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KFS1|A0A1L3KFS1_9VIRU Capsid protein OS=Beihai barnacle virus 11 OX=1922355 PE=4 SV=1
MM1 pKa = 7.55EE2 pKa = 5.39SNVAITVQPNDD13 pKa = 3.08IGSFFSLRR21 pKa = 11.84SLPRR25 pKa = 11.84VVAKK29 pKa = 10.05TGGICLLGVAGYY41 pKa = 10.34KK42 pKa = 9.86IVTSSWLAACVEE54 pKa = 4.4DD55 pKa = 4.71LRR57 pKa = 11.84HH58 pKa = 6.7RR59 pKa = 11.84LISKK63 pKa = 9.83NKK65 pKa = 8.95TIIPEE70 pKa = 4.16AGRR73 pKa = 11.84VRR75 pKa = 11.84AFVQKK80 pKa = 10.44EE81 pKa = 3.97MEE83 pKa = 4.24LVSTSVRR90 pKa = 11.84KK91 pKa = 9.31GHH93 pKa = 5.46SHH95 pKa = 5.14STAASEE101 pKa = 4.25RR102 pKa = 11.84NSATEE107 pKa = 3.67TMIDD111 pKa = 3.58VITTNGYY118 pKa = 8.32EE119 pKa = 4.27PYY121 pKa = 10.27VISPSPRR128 pKa = 11.84EE129 pKa = 3.72SDD131 pKa = 3.04LDD133 pKa = 3.66GVRR136 pKa = 11.84RR137 pKa = 11.84FHH139 pKa = 7.27SLADD143 pKa = 3.35LRR145 pKa = 11.84QDD147 pKa = 3.44YY148 pKa = 10.22RR149 pKa = 11.84RR150 pKa = 11.84SPITDD155 pKa = 2.82RR156 pKa = 11.84HH157 pKa = 6.46IIVMTDD163 pKa = 2.0VDD165 pKa = 4.87YY166 pKa = 11.4YY167 pKa = 11.67VDD169 pKa = 3.25MHH171 pKa = 6.66EE172 pKa = 5.03IISIGRR178 pKa = 11.84PILLYY183 pKa = 9.16TFQPRR188 pKa = 11.84VVSGPVFDD196 pKa = 5.28GFFTIKK202 pKa = 10.75DD203 pKa = 3.76NIIHH207 pKa = 5.63YY208 pKa = 9.56RR209 pKa = 11.84VNGGKK214 pKa = 9.43DD215 pKa = 3.32VKK217 pKa = 10.98HH218 pKa = 5.69PTWNYY223 pKa = 8.83NQDD226 pKa = 3.34TVFVRR231 pKa = 11.84DD232 pKa = 3.59PVNTFWEE239 pKa = 4.47TVYY242 pKa = 11.21SVFRR246 pKa = 11.84EE247 pKa = 3.98VTGISWIDD255 pKa = 3.12RR256 pKa = 11.84MIYY259 pKa = 9.83HH260 pKa = 7.06YY261 pKa = 10.58IGIAPSGRR269 pKa = 11.84RR270 pKa = 11.84LTMCTIDD277 pKa = 3.58QFEE280 pKa = 4.67LSPHH284 pKa = 6.06RR285 pKa = 11.84NIVSIVPFAHH295 pKa = 6.49CRR297 pKa = 11.84EE298 pKa = 4.16NLLPAAEE305 pKa = 4.44YY306 pKa = 8.82GTEE309 pKa = 4.17LSRR312 pKa = 11.84SNYY315 pKa = 8.11QQAAGCPRR323 pKa = 11.84MNAITYY329 pKa = 10.12IGDD332 pKa = 3.76GDD334 pKa = 4.12PLISLGEE341 pKa = 4.06EE342 pKa = 4.2GNFASVQLPLKK353 pKa = 10.26DD354 pKa = 4.1LEE356 pKa = 4.51SLRR359 pKa = 11.84TAYY362 pKa = 10.36HH363 pKa = 6.72LSKK366 pKa = 10.02TNNLSDD372 pKa = 3.38TVRR375 pKa = 11.84RR376 pKa = 11.84SKK378 pKa = 11.2RR379 pKa = 11.84NDD381 pKa = 2.82KK382 pKa = 9.92EE383 pKa = 3.62AAIIHH388 pKa = 5.47QFLVSEE394 pKa = 4.74SEE396 pKa = 3.95LHH398 pKa = 5.73PVEE401 pKa = 4.09VHH403 pKa = 6.96KK404 pKa = 10.66PGQLARR410 pKa = 11.84HH411 pKa = 4.95YY412 pKa = 10.69QSVEE416 pKa = 3.62KK417 pKa = 10.93DD418 pKa = 3.06HH419 pKa = 7.34DD420 pKa = 4.13VDD422 pKa = 3.41PTEE425 pKa = 3.84QGKK428 pKa = 10.12EE429 pKa = 3.95YY430 pKa = 10.76ARR432 pKa = 11.84EE433 pKa = 3.96FAPGPLTQTAVFPSEE448 pKa = 4.09STSNEE453 pKa = 3.39RR454 pKa = 11.84ATIEE458 pKa = 3.74GRR460 pKa = 11.84INVPQAKK467 pKa = 9.75AKK469 pKa = 9.83AKK471 pKa = 10.23EE472 pKa = 4.25RR473 pKa = 11.84ITPRR477 pKa = 11.84LRR479 pKa = 11.84RR480 pKa = 11.84IARR483 pKa = 11.84DD484 pKa = 3.65FVKK487 pKa = 10.66HH488 pKa = 5.82LVPEE492 pKa = 4.62VGAGHH497 pKa = 7.71PYY499 pKa = 10.09SGSHH503 pKa = 6.16VEE505 pKa = 4.22EE506 pKa = 4.35QQQKK510 pKa = 8.97PLQRR514 pKa = 11.84ARR516 pKa = 11.84NDD518 pKa = 3.01ANRR521 pKa = 11.84FHH523 pKa = 7.62DD524 pKa = 4.5AFDD527 pKa = 3.61MVTKK531 pKa = 10.68AFQKK535 pKa = 10.4RR536 pKa = 11.84EE537 pKa = 3.91AYY539 pKa = 8.61NAPNHH544 pKa = 6.13PRR546 pKa = 11.84NISTVPHH553 pKa = 5.58GQNVKK558 pKa = 10.69LSGFTYY564 pKa = 10.44AFKK567 pKa = 10.89DD568 pKa = 4.5AILKK572 pKa = 7.43NQKK575 pKa = 9.04WYY577 pKa = 9.27MPCHH581 pKa = 6.07TPSEE585 pKa = 4.43IATMVQDD592 pKa = 4.33LAAEE596 pKa = 4.2STEE599 pKa = 4.32LVEE602 pKa = 4.1TDD604 pKa = 3.26YY605 pKa = 11.77SRR607 pKa = 11.84FDD609 pKa = 3.3GTFLRR614 pKa = 11.84FMRR617 pKa = 11.84EE618 pKa = 3.98SVEE621 pKa = 3.71FAAYY625 pKa = 9.38KK626 pKa = 10.08RR627 pKa = 11.84WTHH630 pKa = 6.09SDD632 pKa = 2.93HH633 pKa = 6.98SQEE636 pKa = 5.51LDD638 pKa = 3.37DD639 pKa = 5.84LLANEE644 pKa = 4.84IGSKK648 pKa = 10.41AVTRR652 pKa = 11.84KK653 pKa = 9.38GLKK656 pKa = 9.57YY657 pKa = 10.77LPDD660 pKa = 3.96CSRR663 pKa = 11.84LSGSPLTTDD672 pKa = 3.56GNSIANAFVSYY683 pKa = 10.38AANRR687 pKa = 11.84LSGMKK692 pKa = 9.66TEE694 pKa = 4.29EE695 pKa = 3.49AWLNIGIVYY704 pKa = 10.5GDD706 pKa = 3.68DD707 pKa = 3.43GLRR710 pKa = 11.84NGTVSDD716 pKa = 5.09AILMEE721 pKa = 4.49TASSLGFDD729 pKa = 3.74LKK731 pKa = 10.73IINRR735 pKa = 11.84ASRR738 pKa = 11.84GQPVSFLSRR747 pKa = 11.84IYY749 pKa = 10.77ADD751 pKa = 3.62PWSSPASVQSPTRR764 pKa = 11.84TLLKK768 pKa = 10.35IHH770 pKa = 6.0TTCDD774 pKa = 2.82AHH776 pKa = 9.05SDD778 pKa = 3.45IEE780 pKa = 4.35EE781 pKa = 4.21VGWAKK786 pKa = 8.65TQAYY790 pKa = 9.71LVTDD794 pKa = 4.32GLTPFISHH802 pKa = 6.13WCKK805 pKa = 10.35AYY807 pKa = 10.46QRR809 pKa = 11.84NCTSKK814 pKa = 10.34IVDD817 pKa = 3.63YY818 pKa = 11.37KK819 pKa = 11.32DD820 pKa = 3.3FTDD823 pKa = 3.19IPFWVRR829 pKa = 11.84DD830 pKa = 3.76EE831 pKa = 4.79NSLNNSWPQNDD842 pKa = 3.16SDD844 pKa = 3.73EE845 pKa = 4.35WNKK848 pKa = 9.88IVAEE852 pKa = 4.04DD853 pKa = 3.82LGVSVSEE860 pKa = 4.91LMEE863 pKa = 4.42HH864 pKa = 6.87LKK866 pKa = 10.99KK867 pKa = 10.6LDD869 pKa = 4.03GYY871 pKa = 10.48NGPISEE877 pKa = 4.79LPRR880 pKa = 11.84LATNIKK886 pKa = 10.08LDD888 pKa = 3.73PKK890 pKa = 10.64LAVALDD896 pKa = 4.28GEE898 pKa = 4.91VHH900 pKa = 7.26AGPTKK905 pKa = 10.69QEE907 pKa = 4.45DD908 pKa = 4.31GQDD911 pKa = 3.73NPSDD915 pKa = 3.76QPASGTAPTAVPTTGGRR932 pKa = 11.84PQKK935 pKa = 10.11PGRR938 pKa = 11.84ADD940 pKa = 3.41RR941 pKa = 11.84AGRR944 pKa = 11.84QRR946 pKa = 11.84NAHH949 pKa = 6.37LRR951 pKa = 11.84DD952 pKa = 3.6QRR954 pKa = 11.84PSRR957 pKa = 11.84SDD959 pKa = 2.65KK960 pKa = 9.63TARR963 pKa = 11.84PDD965 pKa = 3.5RR966 pKa = 11.84QVSGPSDD973 pKa = 3.67NGPGNPSSGRR983 pKa = 11.84KK984 pKa = 7.66STPQVGGKK992 pKa = 7.37KK993 pKa = 7.46TRR995 pKa = 11.84KK996 pKa = 9.32AA997 pKa = 3.32

Molecular weight: 111.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KFS1|A0A1L3KFS1_9VIRU Capsid protein OS=Beihai barnacle virus 11 OX=1922355 PE=4 SV=1
MM1 pKa = 7.88ANGRR5 pKa = 11.84KK6 pKa = 9.48RR7 pKa = 11.84NNNNNRR13 pKa = 11.84RR14 pKa = 11.84PAQNPQAAPNPRR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84PRR30 pKa = 11.84MRR32 pKa = 11.84RR33 pKa = 11.84GTGGVALVGSNQSTLRR49 pKa = 11.84VNNPTGGRR57 pKa = 11.84AQGGSDD63 pKa = 4.91LIAALTIPSSVEE75 pKa = 3.56QGEE78 pKa = 4.35LLVDD82 pKa = 4.29VIVTPSVAARR92 pKa = 11.84LEE94 pKa = 4.19TLATAWQRR102 pKa = 11.84LKK104 pKa = 10.39YY105 pKa = 8.92HH106 pKa = 6.76KK107 pKa = 11.06LMFEE111 pKa = 4.44VNASGSSLIGGEE123 pKa = 4.16FVAAFIADD131 pKa = 3.89PTDD134 pKa = 3.32VPPLRR139 pKa = 11.84GADD142 pKa = 3.0RR143 pKa = 11.84WVKK146 pKa = 9.64AHH148 pKa = 6.09QGSVTSSWWRR158 pKa = 11.84SVNVHH163 pKa = 6.29GPCPPQVMYY172 pKa = 10.3TSYY175 pKa = 10.99EE176 pKa = 3.89PNEE179 pKa = 4.09PRR181 pKa = 11.84FSSPGRR187 pKa = 11.84FVLAVVNPPSSDD199 pKa = 2.88TTMSISLNWHH209 pKa = 4.27VTFMQPSLEE218 pKa = 4.08YY219 pKa = 10.14TIEE222 pKa = 3.92EE223 pKa = 3.92DD224 pKa = 3.31SIYY227 pKa = 11.02VLEE230 pKa = 4.23EE231 pKa = 3.64DD232 pKa = 5.16ARR234 pKa = 11.84LKK236 pKa = 10.41LTDD239 pKa = 4.67FSAGQPFDD247 pKa = 3.2PHH249 pKa = 6.75LRR251 pKa = 11.84KK252 pKa = 10.2GLDD255 pKa = 3.51GKK257 pKa = 10.69DD258 pKa = 3.02GTAYY262 pKa = 10.88LSPEE266 pKa = 4.63DD267 pKa = 3.98FTPTLPEE274 pKa = 3.82GVMLRR279 pKa = 11.84LPHH282 pKa = 6.88PKK284 pKa = 8.91TLNADD289 pKa = 3.79TGASGAPEE297 pKa = 4.0NAIVTHH303 pKa = 6.13MGVSIAAGSRR313 pKa = 11.84RR314 pKa = 11.84IAYY317 pKa = 8.51FYY319 pKa = 10.63STDD322 pKa = 3.68DD323 pKa = 3.2VHH325 pKa = 5.93YY326 pKa = 8.25TQLDD330 pKa = 3.24ASLPFSIRR338 pKa = 11.84PVADD342 pKa = 4.68PINKK346 pKa = 9.68KK347 pKa = 8.51GTVYY351 pKa = 10.78EE352 pKa = 4.1EE353 pKa = 4.67DD354 pKa = 3.55VLEE357 pKa = 4.59SGNATGALARR367 pKa = 11.84SARR370 pKa = 11.84VPRR373 pKa = 11.84SLTSAPALRR382 pKa = 11.84QSSKK386 pKa = 11.18GKK388 pKa = 10.05LLSFQNSKK396 pKa = 10.71RR397 pKa = 11.84FF398 pKa = 3.37

Molecular weight: 43.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1395

398

997

697.5

77.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.957 ± 0.656

0.789 ± 0.263

6.022 ± 0.611

5.305 ± 0.383

3.297 ± 0.015

6.667 ± 0.427

2.867 ± 0.42

4.946 ± 0.823

4.516 ± 0.612

7.168 ± 0.55

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.649 ± 0.177

4.803 ± 0.232

6.667 ± 0.796

3.584 ± 0.156

7.312 ± 0.111

8.746 ± 0.393

6.523 ± 0.005

6.882 ± 0.198

1.29 ± 0.017

3.011 ± 0.244
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski