Capybara microvirus Cap1_SP_77

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVN1|A0A4V1FVN1_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_77 OX=2584791 PE=4 SV=1
MM1 pKa = 7.46SNVFIEE7 pKa = 4.7RR8 pKa = 11.84EE9 pKa = 4.01NFSPNIKK16 pKa = 10.31RR17 pKa = 11.84NVFDD21 pKa = 5.95LSHH24 pKa = 6.29QNNLSLKK31 pKa = 9.12IGKK34 pKa = 8.0ITPIYY39 pKa = 8.86CQEE42 pKa = 4.08VLPGTSVKK50 pKa = 9.85MDD52 pKa = 3.24VVSALRR58 pKa = 11.84AAPLFFPIQTKK69 pKa = 10.17IKK71 pKa = 9.69ASMSFFYY78 pKa = 10.89VRR80 pKa = 11.84NRR82 pKa = 11.84NLWDD86 pKa = 3.62DD87 pKa = 3.31WTKK90 pKa = 10.78FISNEE95 pKa = 4.17EE96 pKa = 4.12TSSTFPVIDD105 pKa = 3.62ASKK108 pKa = 10.12NPEE111 pKa = 3.83FFKK114 pKa = 11.24VGGLADD120 pKa = 3.86YY121 pKa = 10.93LGVPTAFYY129 pKa = 10.16GYY131 pKa = 7.09PTASLTTALDD141 pKa = 3.65AEE143 pKa = 4.6EE144 pKa = 4.16VLSNLEE150 pKa = 3.5TSYY153 pKa = 11.51YY154 pKa = 9.46EE155 pKa = 4.29KK156 pKa = 10.73KK157 pKa = 10.62KK158 pKa = 9.27STHH161 pKa = 5.21SLAYY165 pKa = 8.99VQHH168 pKa = 6.71SYY170 pKa = 11.25DD171 pKa = 3.44VSSDD175 pKa = 3.24RR176 pKa = 11.84MAGYY180 pKa = 10.3CGIINSTITPGVKK193 pKa = 9.99FSAVSFGGNRR203 pKa = 11.84SGEE206 pKa = 4.44SVVGNYY212 pKa = 9.16DD213 pKa = 3.85LPWTAGGFTYY223 pKa = 10.79NKK225 pKa = 8.29YY226 pKa = 9.48GRR228 pKa = 11.84VYY230 pKa = 10.67RR231 pKa = 11.84VTKK234 pKa = 10.45KK235 pKa = 10.32LASGNMTVKK244 pKa = 10.38SRR246 pKa = 11.84SACSLMVIVNGTVVAVQTGSYY267 pKa = 10.37ASSTTTIGLLQTVVDD282 pKa = 5.84AINKK286 pKa = 10.03AIDD289 pKa = 4.09DD290 pKa = 4.15GQVVHH295 pKa = 6.75FCVFTQGTQTSFSPSTIYY313 pKa = 10.79YY314 pKa = 9.29IEE316 pKa = 3.98QLIVQYY322 pKa = 11.31DD323 pKa = 3.7NTDD326 pKa = 3.11ATEE329 pKa = 3.82WKK331 pKa = 10.23AISGYY336 pKa = 10.56NSYY339 pKa = 11.45NPFLADD345 pKa = 3.61GMKK348 pKa = 10.57LSALPFRR355 pKa = 11.84AYY357 pKa = 10.18EE358 pKa = 3.99SVYY361 pKa = 9.5NCFYY365 pKa = 10.45RR366 pKa = 11.84KK367 pKa = 9.51EE368 pKa = 4.12RR369 pKa = 11.84VDD371 pKa = 3.54PNRR374 pKa = 11.84VNGKK378 pKa = 9.11IEE380 pKa = 3.97YY381 pKa = 9.94DD382 pKa = 3.91VYY384 pKa = 11.12CDD386 pKa = 3.76KK387 pKa = 11.58SGGNDD392 pKa = 2.82TNYY395 pKa = 10.22YY396 pKa = 9.93HH397 pKa = 7.48LYY399 pKa = 9.2DD400 pKa = 4.93APWEE404 pKa = 4.15TDD406 pKa = 2.84QFTSCLPTPQAGVAPLVGLTSNFSGVVSATFLDD439 pKa = 4.12EE440 pKa = 4.33SGNTVKK446 pKa = 10.85YY447 pKa = 10.32DD448 pKa = 3.59VQSVTDD454 pKa = 3.7SSGKK458 pKa = 8.01ITGFAYY464 pKa = 10.58SEE466 pKa = 4.85DD467 pKa = 3.95IPWSVRR473 pKa = 11.84EE474 pKa = 3.96QLNHH478 pKa = 6.04SVLSGFDD485 pKa = 3.28INSLRR490 pKa = 11.84NVSAFQIYY498 pKa = 10.45LEE500 pKa = 4.29NKK502 pKa = 8.66LRR504 pKa = 11.84RR505 pKa = 11.84GLKK508 pKa = 10.09YY509 pKa = 9.42VDD511 pKa = 3.64QIKK514 pKa = 10.15SHH516 pKa = 6.78FGVQPSYY523 pKa = 10.89EE524 pKa = 4.09ALNMPEE530 pKa = 4.11YY531 pKa = 10.32IGGVTEE537 pKa = 4.27TFNVNQISSTIEE549 pKa = 3.57NDD551 pKa = 3.33KK552 pKa = 11.23VSLGDD557 pKa = 3.33YY558 pKa = 9.63AGQMTCMAHH567 pKa = 6.24PNHH570 pKa = 6.67NISHH574 pKa = 6.14YY575 pKa = 9.83CDD577 pKa = 2.98EE578 pKa = 4.89HH579 pKa = 7.76GFIIGVLSIVPIPNYY594 pKa = 10.41SQALPKK600 pKa = 10.59FFGKK604 pKa = 7.32TTTFDD609 pKa = 3.83YY610 pKa = 8.18YY611 pKa = 10.93TPEE614 pKa = 4.25LDD616 pKa = 4.3KK617 pKa = 11.56LSLQPVRR624 pKa = 11.84NWEE627 pKa = 3.88IAPVQTFANADD638 pKa = 3.52SGSKK642 pKa = 9.72IEE644 pKa = 4.6ALDD647 pKa = 3.76GVFGYY652 pKa = 9.28QLPWYY657 pKa = 8.36EE658 pKa = 4.01YY659 pKa = 10.5KK660 pKa = 10.9GALDD664 pKa = 3.81TVHH667 pKa = 8.04GEE669 pKa = 3.68MRR671 pKa = 11.84TDD673 pKa = 3.76LRR675 pKa = 11.84DD676 pKa = 3.52FMMNRR681 pKa = 11.84VFRR684 pKa = 11.84TTPQLGSDD692 pKa = 3.8FVYY695 pKa = 11.14VDD697 pKa = 3.75GEE699 pKa = 4.55SVNNVFNVQDD709 pKa = 4.14DD710 pKa = 4.51DD711 pKa = 3.89VDD713 pKa = 4.14KK714 pKa = 10.88IYY716 pKa = 10.73GQIYY720 pKa = 9.59FDD722 pKa = 4.28VKK724 pKa = 9.6TKK726 pKa = 10.88HH727 pKa = 5.21PMSRR731 pKa = 11.84IGQPVYY737 pKa = 10.36HH738 pKa = 7.06

Molecular weight: 82.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4R6|A0A4P8W4R6_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_77 OX=2584791 PE=3 SV=1
MM1 pKa = 7.51KK2 pKa = 10.17CLNPVIMINRR12 pKa = 11.84PFLYY16 pKa = 10.54SFDD19 pKa = 3.58GRR21 pKa = 11.84IEE23 pKa = 3.84FANIDD28 pKa = 3.76NNIISHH34 pKa = 6.76PSPYY38 pKa = 10.31DD39 pKa = 3.21VEE41 pKa = 4.51FAANVALCSLPKK53 pKa = 10.46NEE55 pKa = 4.74EE56 pKa = 3.95GNVARR61 pKa = 11.84FDD63 pKa = 4.07YY64 pKa = 10.56SVHH67 pKa = 6.0PFEE70 pKa = 5.32IAVSGYY76 pKa = 9.96VDD78 pKa = 3.63GVFYY82 pKa = 10.02PASNPCMKK90 pKa = 10.16VFLLQVPCRR99 pKa = 11.84KK100 pKa = 9.87CEE102 pKa = 3.97LCCEE106 pKa = 4.18NRR108 pKa = 11.84KK109 pKa = 6.64QTYY112 pKa = 5.68VHH114 pKa = 7.2RR115 pKa = 11.84IMFEE119 pKa = 4.11AEE121 pKa = 3.91SSRR124 pKa = 11.84QVDD127 pKa = 4.34FVTLTFDD134 pKa = 3.58RR135 pKa = 11.84DD136 pKa = 3.72HH137 pKa = 6.59YY138 pKa = 10.01PSRR141 pKa = 11.84GATKK145 pKa = 10.35QEE147 pKa = 3.75LQRR150 pKa = 11.84FIDD153 pKa = 3.67SFRR156 pKa = 11.84KK157 pKa = 9.19FIKK160 pKa = 9.92RR161 pKa = 11.84YY162 pKa = 8.31SEE164 pKa = 3.8EE165 pKa = 3.93RR166 pKa = 11.84PRR168 pKa = 11.84TPKK171 pKa = 10.43VFDD174 pKa = 3.7GDD176 pKa = 3.25KK177 pKa = 10.15FRR179 pKa = 11.84YY180 pKa = 9.51IFVSEE185 pKa = 4.25YY186 pKa = 7.91GHH188 pKa = 6.92KK189 pKa = 10.81GRR191 pKa = 11.84GHH193 pKa = 5.1YY194 pKa = 9.78HH195 pKa = 6.96GEE197 pKa = 4.11MFNLPPYY204 pKa = 10.65EE205 pKa = 4.17EE206 pKa = 4.32FKK208 pKa = 10.91EE209 pKa = 4.66LYY211 pKa = 9.55ILQHH215 pKa = 5.56GTTLKK220 pKa = 11.08YY221 pKa = 9.62ITDD224 pKa = 3.97PQNSRR229 pKa = 11.84TVFYY233 pKa = 10.75EE234 pKa = 4.01DD235 pKa = 4.73LNPAPFYY242 pKa = 9.99KK243 pKa = 10.37LKK245 pKa = 10.88RR246 pKa = 11.84KK247 pKa = 8.83GCPVLEE253 pKa = 4.37PSVHH257 pKa = 7.04RR258 pKa = 11.84DD259 pKa = 3.39YY260 pKa = 11.47LYY262 pKa = 10.92LDD264 pKa = 3.54YY265 pKa = 10.92YY266 pKa = 9.49VRR268 pKa = 11.84KK269 pKa = 9.32IWNNGLTCSEE279 pKa = 4.24PTKK282 pKa = 10.89DD283 pKa = 4.25SAGSYY288 pKa = 7.9CAKK291 pKa = 10.44YY292 pKa = 9.89INKK295 pKa = 8.71PSEE298 pKa = 4.15MVPEE302 pKa = 4.94GCDD305 pKa = 2.92KK306 pKa = 11.29CFVLASNKK314 pKa = 10.17NGGIGSQYY322 pKa = 9.31CKK324 pKa = 9.88TVIRR328 pKa = 11.84EE329 pKa = 4.04FLKK332 pKa = 10.92KK333 pKa = 10.53NPTALVYY340 pKa = 10.43KK341 pKa = 9.39FRR343 pKa = 11.84PRR345 pKa = 11.84HH346 pKa = 5.32SSLIYY351 pKa = 9.03NIPIIGYY358 pKa = 8.4VKK360 pKa = 10.57NLALPRR366 pKa = 11.84PSDD369 pKa = 3.7VLSQRR374 pKa = 11.84YY375 pKa = 8.72VDD377 pKa = 3.71SFKK380 pKa = 10.54IYY382 pKa = 9.09HH383 pKa = 6.83WYY385 pKa = 10.38NRR387 pKa = 11.84MIGDD391 pKa = 3.45VLEE394 pKa = 4.24YY395 pKa = 10.65QFAEE399 pKa = 4.15AFFAPRR405 pKa = 11.84GCIKK409 pKa = 10.33PFRR412 pKa = 11.84STDD415 pKa = 3.37YY416 pKa = 10.34RR417 pKa = 11.84RR418 pKa = 11.84KK419 pKa = 10.55NPTEE423 pKa = 3.64YY424 pKa = 10.94EE425 pKa = 3.95KK426 pKa = 10.75FIKK429 pKa = 10.22KK430 pKa = 9.36NRR432 pKa = 11.84SKK434 pKa = 11.5EE435 pKa = 4.11EE436 pKa = 3.33ISKK439 pKa = 10.47IEE441 pKa = 4.28DD442 pKa = 3.18YY443 pKa = 11.2LYY445 pKa = 10.31IEE447 pKa = 4.78RR448 pKa = 11.84QNIDD452 pKa = 2.62WNEE455 pKa = 3.79IFKK458 pKa = 10.47LAHH461 pKa = 6.04LRR463 pKa = 11.84VINNKK468 pKa = 9.04AFRR471 pKa = 11.84DD472 pKa = 3.88SEE474 pKa = 3.98IPYY477 pKa = 9.91IDD479 pKa = 4.76DD480 pKa = 4.31LSDD483 pKa = 3.14EE484 pKa = 4.14LRR486 pKa = 11.84EE487 pKa = 4.05VRR489 pKa = 11.84SKK491 pKa = 11.26NLWRR495 pKa = 11.84KK496 pKa = 8.51EE497 pKa = 4.0RR498 pKa = 11.84IKK500 pKa = 11.06LL501 pKa = 3.62

Molecular weight: 59.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1777

72

738

355.4

40.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.684 ± 1.18

1.463 ± 0.538

5.796 ± 0.476

6.134 ± 1.03

5.008 ± 0.858

5.459 ± 0.77

1.745 ± 0.324

6.19 ± 0.754

5.965 ± 0.785

7.485 ± 0.879

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.364 ± 0.597

6.922 ± 1.012

4.389 ± 0.721

4.615 ± 1.435

5.29 ± 1.091

7.372 ± 0.915

5.402 ± 0.996

6.415 ± 1.394

1.182 ± 0.193

5.121 ± 1.128
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski