Amino acid dipepetide frequency for Beihai mantis shrimp virus 5

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.329AlaAla: 4.329 ± 0.639
1.332AlaCys: 1.332 ± 0.714
2.997AlaAsp: 2.997 ± 0.485
1.998AlaGlu: 1.998 ± 0.05
2.664AlaPhe: 2.664 ± 0.813
4.662AlaGly: 4.662 ± 0.863
1.332AlaHis: 1.332 ± 0.153
4.995AlaIle: 4.995 ± 0.124
3.996AlaLys: 3.996 ± 0.66
4.995AlaLeu: 4.995 ± 0.996
1.332AlaMet: 1.332 ± 0.153
3.33AlaAsn: 3.33 ± 0.456
3.996AlaPro: 3.996 ± 1.78
4.329AlaGln: 4.329 ± 0.639
2.997AlaArg: 2.997 ± 1.606
9.324AlaSer: 9.324 ± 0.514
3.996AlaThr: 3.996 ± 0.66
2.331AlaVal: 2.331 ± 0.992
0.999AlaTrp: 0.999 ± 0.535
0.999AlaTyr: 0.999 ± 0.585
0.0AlaXaa: 0.0 ± 0.0
Cys
2.997CysAla: 2.997 ± 0.485
0.999CysCys: 0.999 ± 0.535
2.997CysAsp: 2.997 ± 1.045
2.664CysGlu: 2.664 ± 1.427
1.332CysPhe: 1.332 ± 0.714
0.999CysGly: 0.999 ± 0.535
0.333CysHis: 0.333 ± 0.178
0.666CysIle: 0.666 ± 0.203
1.665CysLys: 1.665 ± 0.892
1.665CysLeu: 1.665 ± 0.892
0.333CysMet: 0.333 ± 0.178
2.331CysAsn: 2.331 ± 1.249
0.666CysPro: 0.666 ± 0.203
0.0CysGln: 0.0 ± 0.0
0.999CysArg: 0.999 ± 0.585
0.333CysSer: 0.333 ± 0.178
0.666CysThr: 0.666 ± 0.357
0.999CysVal: 0.999 ± 0.535
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.331AspAla: 2.331 ± 0.129
1.332AspCys: 1.332 ± 0.714
3.996AspAsp: 3.996 ± 0.66
2.997AspGlu: 2.997 ± 0.075
3.663AspPhe: 3.663 ± 0.838
1.998AspGly: 1.998 ± 0.51
0.999AspHis: 0.999 ± 0.025
7.326AspIle: 7.326 ± 0.004
4.329AspLys: 4.329 ± 1.199
3.663AspLeu: 3.663 ± 0.842
1.998AspMet: 1.998 ± 0.51
3.996AspAsn: 3.996 ± 1.021
2.331AspPro: 2.331 ± 0.992
0.999AspGln: 0.999 ± 0.585
1.998AspArg: 1.998 ± 0.05
5.661AspSer: 5.661 ± 0.792
2.664AspThr: 2.664 ± 1.373
6.327AspVal: 6.327 ± 0.589
1.332AspTrp: 1.332 ± 0.714
3.996AspTyr: 3.996 ± 0.66
0.0AspXaa: 0.0 ± 0.0
Glu
3.33GluAla: 3.33 ± 1.224
0.999GluCys: 0.999 ± 0.535
2.997GluAsp: 2.997 ± 0.075
2.997GluGlu: 2.997 ± 1.045
1.998GluPhe: 1.998 ± 0.51
1.998GluGly: 1.998 ± 0.05
0.666GluHis: 0.666 ± 0.203
3.33GluIle: 3.33 ± 0.456
1.998GluLys: 1.998 ± 0.51
4.329GluLeu: 4.329 ± 1.199
2.331GluMet: 2.331 ± 0.129
3.663GluAsn: 3.663 ± 0.278
1.665GluPro: 1.665 ± 0.228
0.666GluGln: 0.666 ± 0.203
0.333GluArg: 0.333 ± 0.178
5.994GluSer: 5.994 ± 1.531
2.664GluThr: 2.664 ± 0.307
3.33GluVal: 3.33 ± 0.664
0.333GluTrp: 0.333 ± 0.178
2.331GluTyr: 2.331 ± 0.431
0.0GluXaa: 0.0 ± 0.0
Phe
5.328PheAla: 5.328 ± 1.734
0.333PheCys: 0.333 ± 0.178
2.664PheAsp: 2.664 ± 0.253
3.663PheGlu: 3.663 ± 0.842
0.999PhePhe: 0.999 ± 0.535
1.332PheGly: 1.332 ± 0.407
0.333PheHis: 0.333 ± 0.178
1.998PheIle: 1.998 ± 0.05
2.331PheLys: 2.331 ± 1.249
2.997PheLeu: 2.997 ± 0.485
0.999PheMet: 0.999 ± 0.585
2.331PheAsn: 2.331 ± 0.689
4.329PhePro: 4.329 ± 0.079
0.666PheGln: 0.666 ± 0.203
1.332PheArg: 1.332 ± 0.153
3.663PheSer: 3.663 ± 0.278
4.329PheThr: 4.329 ± 2.722
4.329PheVal: 4.329 ± 0.639
0.333PheTrp: 0.333 ± 0.178
0.999PheTyr: 0.999 ± 0.025
0.0PheXaa: 0.0 ± 0.0
Gly
2.664GlyAla: 2.664 ± 0.307
2.331GlyCys: 2.331 ± 0.129
5.661GlyAsp: 5.661 ± 0.792
1.665GlyGlu: 1.665 ± 0.788
4.662GlyPhe: 4.662 ± 0.303
1.332GlyGly: 1.332 ± 0.407
0.999GlyHis: 0.999 ± 0.025
3.33GlyIle: 3.33 ± 1.016
1.998GlyLys: 1.998 ± 1.07
4.662GlyLeu: 4.662 ± 0.303
1.332GlyMet: 1.332 ± 0.153
1.665GlyAsn: 1.665 ± 0.332
0.666GlyPro: 0.666 ± 0.763
0.999GlyGln: 0.999 ± 0.535
2.664GlyArg: 2.664 ± 0.253
3.996GlySer: 3.996 ± 0.1
4.329GlyThr: 4.329 ± 2.161
4.995GlyVal: 4.995 ± 0.685
0.0GlyTrp: 0.0 ± 0.0
1.998GlyTyr: 1.998 ± 0.61
0.0GlyXaa: 0.0 ± 0.0
His
1.332HisAla: 1.332 ± 0.407
0.333HisCys: 0.333 ± 0.178
2.331HisAsp: 2.331 ± 0.689
0.0HisGlu: 0.0 ± 0.0
0.333HisPhe: 0.333 ± 0.382
2.664HisGly: 2.664 ± 0.307
0.0HisHis: 0.0 ± 0.0
0.0HisIle: 0.0 ± 0.0
0.666HisLys: 0.666 ± 0.357
1.332HisLeu: 1.332 ± 0.153
0.666HisMet: 0.666 ± 0.357
0.0HisAsn: 0.0 ± 0.0
1.332HisPro: 1.332 ± 0.714
2.997HisGln: 2.997 ± 1.045
0.333HisArg: 0.333 ± 0.178
0.999HisSer: 0.999 ± 0.535
0.333HisThr: 0.333 ± 0.382
3.663HisVal: 3.663 ± 1.402
0.333HisTrp: 0.333 ± 0.178
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.662IleAla: 4.662 ± 0.863
1.998IleCys: 1.998 ± 0.51
1.332IleAsp: 1.332 ± 0.407
4.662IleGlu: 4.662 ± 0.303
3.33IlePhe: 3.33 ± 1.224
2.664IleGly: 2.664 ± 0.253
0.999IleHis: 0.999 ± 0.535
4.995IleIle: 4.995 ± 0.996
3.33IleLys: 3.33 ± 0.104
2.664IleLeu: 2.664 ± 0.307
0.999IleMet: 0.999 ± 0.535
1.665IleAsn: 1.665 ± 0.228
2.997IlePro: 2.997 ± 0.635
1.998IleGln: 1.998 ± 1.07
2.997IleArg: 2.997 ± 1.045
6.66IleSer: 6.66 ± 2.033
5.328IleThr: 5.328 ± 0.506
5.328IleVal: 5.328 ± 0.506
0.666IleTrp: 0.666 ± 0.357
1.332IleTyr: 1.332 ± 0.407
0.0IleXaa: 0.0 ± 0.0
Lys
3.996LysAla: 3.996 ± 1.021
0.333LysCys: 0.333 ± 0.178
4.329LysAsp: 4.329 ± 0.639
2.331LysGlu: 2.331 ± 0.689
1.665LysPhe: 1.665 ± 0.332
2.664LysGly: 2.664 ± 0.813
1.332LysHis: 1.332 ± 0.153
3.996LysIle: 3.996 ± 1.021
1.332LysLys: 1.332 ± 0.714
2.664LysLeu: 2.664 ± 0.813
0.666LysMet: 0.666 ± 0.203
4.662LysAsn: 4.662 ± 0.257
2.997LysPro: 2.997 ± 1.045
0.999LysGln: 0.999 ± 0.535
2.331LysArg: 2.331 ± 1.249
4.329LysSer: 4.329 ± 1.199
2.664LysThr: 2.664 ± 0.307
6.327LysVal: 6.327 ± 2.269
0.333LysTrp: 0.333 ± 0.382
0.666LysTyr: 0.666 ± 0.357
0.0LysXaa: 0.0 ± 0.0
Leu
6.327LeuAla: 6.327 ± 1.651
2.331LeuCys: 2.331 ± 0.689
4.662LeuAsp: 4.662 ± 0.863
1.665LeuGlu: 1.665 ± 0.892
3.663LeuPhe: 3.663 ± 0.278
3.663LeuGly: 3.663 ± 0.842
1.665LeuHis: 1.665 ± 0.892
3.996LeuIle: 3.996 ± 0.66
4.329LeuLys: 4.329 ± 0.639
6.66LeuLeu: 6.66 ± 0.767
2.997LeuMet: 2.997 ± 0.969
6.327LeuAsn: 6.327 ± 0.589
5.328LeuPro: 5.328 ± 1.066
2.997LeuGln: 2.997 ± 1.755
3.996LeuArg: 3.996 ± 1.22
9.657LeuSer: 9.657 ± 1.548
3.663LeuThr: 3.663 ± 0.278
5.994LeuVal: 5.994 ± 0.709
0.666LeuTrp: 0.666 ± 0.763
2.997LeuTyr: 2.997 ± 0.635
0.0LeuXaa: 0.0 ± 0.0
Met
1.665MetAla: 1.665 ± 0.332
0.999MetCys: 0.999 ± 0.535
0.666MetAsp: 0.666 ± 0.203
0.666MetGlu: 0.666 ± 0.357
0.999MetPhe: 0.999 ± 0.025
0.666MetGly: 0.666 ± 0.203
0.999MetHis: 0.999 ± 0.025
0.999MetIle: 0.999 ± 0.025
0.666MetLys: 0.666 ± 0.357
2.331MetLeu: 2.331 ± 0.129
0.0MetMet: 0.0 ± 0.0
1.332MetAsn: 1.332 ± 0.967
0.999MetPro: 0.999 ± 0.535
0.666MetGln: 0.666 ± 0.357
1.665MetArg: 1.665 ± 0.788
2.664MetSer: 2.664 ± 1.427
0.666MetThr: 0.666 ± 0.203
1.665MetVal: 1.665 ± 0.892
0.333MetTrp: 0.333 ± 0.178
1.665MetTyr: 1.665 ± 0.228
0.0MetXaa: 0.0 ± 0.0
Asn
3.33AsnAla: 3.33 ± 0.104
0.999AsnCys: 0.999 ± 0.535
1.332AsnAsp: 1.332 ± 0.407
3.33AsnGlu: 3.33 ± 0.664
2.664AsnPhe: 2.664 ± 1.427
3.996AsnGly: 3.996 ± 0.46
0.333AsnHis: 0.333 ± 0.178
2.664AsnIle: 2.664 ± 0.307
2.331AsnLys: 2.331 ± 0.129
4.329AsnLeu: 4.329 ± 2.161
1.332AsnMet: 1.332 ± 0.714
2.331AsnAsn: 2.331 ± 0.129
3.996AsnPro: 3.996 ± 0.1
1.998AsnGln: 1.998 ± 0.51
2.331AsnArg: 2.331 ± 0.689
4.995AsnSer: 4.995 ± 0.124
1.332AsnThr: 1.332 ± 0.967
4.995AsnVal: 4.995 ± 0.685
0.999AsnTrp: 0.999 ± 0.025
1.998AsnTyr: 1.998 ± 0.05
0.0AsnXaa: 0.0 ± 0.0
Pro
2.664ProAla: 2.664 ± 0.813
0.0ProCys: 0.0 ± 0.0
3.33ProAsp: 3.33 ± 0.456
1.998ProGlu: 1.998 ± 0.05
2.331ProPhe: 2.331 ± 1.552
2.997ProGly: 2.997 ± 0.635
0.999ProHis: 0.999 ± 0.535
2.997ProIle: 2.997 ± 1.195
2.997ProLys: 2.997 ± 1.045
3.33ProLeu: 3.33 ± 1.016
0.666ProMet: 0.666 ± 0.357
3.663ProAsn: 3.663 ± 0.278
1.998ProPro: 1.998 ± 0.05
2.664ProGln: 2.664 ± 0.253
2.331ProArg: 2.331 ± 0.129
6.66ProSer: 6.66 ± 0.913
2.997ProThr: 2.997 ± 1.195
3.996ProVal: 3.996 ± 1.78
0.333ProTrp: 0.333 ± 0.382
2.664ProTyr: 2.664 ± 0.307
0.0ProXaa: 0.0 ± 0.0
Gln
1.665GlnAla: 1.665 ± 1.348
0.999GlnCys: 0.999 ± 0.025
3.663GlnAsp: 3.663 ± 0.842
1.332GlnGlu: 1.332 ± 0.714
1.332GlnPhe: 1.332 ± 0.153
3.996GlnGly: 3.996 ± 0.66
0.666GlnHis: 0.666 ± 0.357
1.665GlnIle: 1.665 ± 0.332
0.999GlnLys: 0.999 ± 0.535
2.997GlnLeu: 2.997 ± 0.075
0.999GlnMet: 0.999 ± 0.535
1.998GlnAsn: 1.998 ± 0.51
1.332GlnPro: 1.332 ± 0.967
0.999GlnGln: 0.999 ± 0.025
2.331GlnArg: 2.331 ± 0.129
1.665GlnSer: 1.665 ± 0.228
1.998GlnThr: 1.998 ± 0.51
2.331GlnVal: 2.331 ± 0.431
0.0GlnTrp: 0.0 ± 0.0
1.665GlnTyr: 1.665 ± 0.788
0.0GlnXaa: 0.0 ± 0.0
Arg
2.664ArgAla: 2.664 ± 0.253
1.332ArgCys: 1.332 ± 0.714
0.999ArgAsp: 0.999 ± 0.585
0.999ArgGlu: 0.999 ± 0.535
1.332ArgPhe: 1.332 ± 0.407
1.665ArgGly: 1.665 ± 0.228
0.999ArgHis: 0.999 ± 0.535
2.664ArgIle: 2.664 ± 0.867
3.996ArgLys: 3.996 ± 1.581
4.662ArgLeu: 4.662 ± 0.257
1.332ArgMet: 1.332 ± 0.153
1.998ArgAsn: 1.998 ± 0.61
1.665ArgPro: 1.665 ± 0.228
2.331ArgGln: 2.331 ± 0.689
2.997ArgArg: 2.997 ± 0.485
5.328ArgSer: 5.328 ± 0.506
1.665ArgThr: 1.665 ± 0.228
5.661ArgVal: 5.661 ± 0.232
0.0ArgTrp: 0.0 ± 0.0
1.665ArgTyr: 1.665 ± 0.332
0.0ArgXaa: 0.0 ± 0.0
Ser
6.993SerAla: 6.993 ± 0.174
1.665SerCys: 1.665 ± 0.892
4.329SerAsp: 4.329 ± 0.481
5.661SerGlu: 5.661 ± 1.448
3.996SerPhe: 3.996 ± 0.1
4.995SerGly: 4.995 ± 0.124
3.33SerHis: 3.33 ± 1.784
4.995SerIle: 4.995 ± 0.124
3.996SerLys: 3.996 ± 0.1
10.656SerLeu: 10.656 ± 1.572
0.999SerMet: 0.999 ± 0.025
3.663SerAsn: 3.663 ± 0.282
5.661SerPro: 5.661 ± 0.888
3.663SerGln: 3.663 ± 0.838
5.328SerArg: 5.328 ± 0.506
9.324SerSer: 9.324 ± 2.286
3.996SerThr: 3.996 ± 0.46
8.658SerVal: 8.658 ± 0.402
1.665SerTrp: 1.665 ± 0.788
4.329SerTyr: 4.329 ± 1.041
0.0SerXaa: 0.0 ± 0.0
Thr
2.664ThrAla: 2.664 ± 0.813
0.666ThrCys: 0.666 ± 0.203
3.996ThrAsp: 3.996 ± 0.1
1.332ThrGlu: 1.332 ± 0.153
2.997ThrPhe: 2.997 ± 0.485
2.331ThrGly: 2.331 ± 0.431
1.665ThrHis: 1.665 ± 0.788
3.663ThrIle: 3.663 ± 0.278
3.663ThrLys: 3.663 ± 0.838
6.993ThrLeu: 6.993 ± 3.535
0.999ThrMet: 0.999 ± 0.585
1.665ThrAsn: 1.665 ± 0.788
1.665ThrPro: 1.665 ± 0.788
2.331ThrGln: 2.331 ± 0.129
2.664ThrArg: 2.664 ± 1.427
4.662ThrSer: 4.662 ± 1.423
3.663ThrThr: 3.663 ± 0.278
4.995ThrVal: 4.995 ± 1.805
0.666ThrTrp: 0.666 ± 0.203
1.332ThrTyr: 1.332 ± 0.967
0.0ThrXaa: 0.0 ± 0.0
Val
6.993ValAla: 6.993 ± 0.734
2.997ValCys: 2.997 ± 1.606
7.659ValAsp: 7.659 ± 0.743
4.995ValGlu: 4.995 ± 0.996
3.33ValPhe: 3.33 ± 1.784
4.329ValGly: 4.329 ± 0.079
1.665ValHis: 1.665 ± 0.892
4.662ValIle: 4.662 ± 0.257
4.662ValLys: 4.662 ± 1.937
6.327ValLeu: 6.327 ± 3.331
0.666ValMet: 0.666 ± 0.417
3.996ValAsn: 3.996 ± 0.46
4.662ValPro: 4.662 ± 0.303
1.998ValGln: 1.998 ± 1.73
4.329ValArg: 4.329 ± 0.639
6.993ValSer: 6.993 ± 2.975
4.329ValThr: 4.329 ± 1.601
3.996ValVal: 3.996 ± 1.021
0.333ValTrp: 0.333 ± 0.178
3.33ValTyr: 3.33 ± 0.664
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.999TrpAsp: 0.999 ± 0.535
0.333TrpGlu: 0.333 ± 0.178
0.666TrpPhe: 0.666 ± 0.203
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.666TrpIle: 0.666 ± 0.357
0.333TrpLys: 0.333 ± 0.382
2.664TrpLeu: 2.664 ± 0.867
0.333TrpMet: 0.333 ± 0.382
0.333TrpAsn: 0.333 ± 0.382
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.333TrpArg: 0.333 ± 0.382
0.666TrpSer: 0.666 ± 0.357
0.999TrpThr: 0.999 ± 0.025
0.999TrpVal: 0.999 ± 0.585
0.333TrpTrp: 0.333 ± 0.382
0.333TrpTyr: 0.333 ± 0.178
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.999TyrAla: 0.999 ± 0.535
0.666TyrCys: 0.666 ± 0.203
2.997TyrAsp: 2.997 ± 0.485
2.664TyrGlu: 2.664 ± 0.307
1.332TyrPhe: 1.332 ± 0.153
2.997TyrGly: 2.997 ± 1.755
0.333TyrHis: 0.333 ± 0.382
0.999TyrIle: 0.999 ± 0.535
0.999TyrLys: 0.999 ± 0.585
3.663TyrLeu: 3.663 ± 0.842
0.999TyrMet: 0.999 ± 0.025
0.666TyrAsn: 0.666 ± 0.203
3.33TyrPro: 3.33 ± 1.577
1.332TyrGln: 1.332 ± 0.153
1.665TyrArg: 1.665 ± 0.788
4.329TyrSer: 4.329 ± 1.601
2.331TyrThr: 2.331 ± 0.992
1.665TyrVal: 1.665 ± 0.332
0.333TyrTrp: 0.333 ± 0.178
1.665TyrTyr: 1.665 ± 0.892
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (3004 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski