Bacteroides sp. CAG:633

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3004 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R6FPN9|R6FPN9_9BACE Rhamnulokinase OS=Bacteroides sp. CAG:633 OX=1262744 GN=BN744_02636 PE=4 SV=1
MM1 pKa = 6.94NTRR4 pKa = 11.84NVNIPDD10 pKa = 3.85IDD12 pKa = 4.8DD13 pKa = 4.79LDD15 pKa = 4.22ALCRR19 pKa = 11.84AIDD22 pKa = 3.41WTQYY26 pKa = 11.24QSMLEE31 pKa = 3.75QSLANEE37 pKa = 4.26KK38 pKa = 8.45TWEE41 pKa = 4.29FGCMDD46 pKa = 4.92EE47 pKa = 5.12YY48 pKa = 11.62NPHH51 pKa = 6.56TDD53 pKa = 3.15NIAQIEE59 pKa = 4.36EE60 pKa = 4.19EE61 pKa = 4.78LNFLSAGEE69 pKa = 4.12YY70 pKa = 8.51EE71 pKa = 5.1AIVRR75 pKa = 11.84MHH77 pKa = 6.86DD78 pKa = 2.96AEE80 pKa = 4.3YY81 pKa = 10.45FQDD84 pKa = 4.73FVV86 pKa = 3.82

Molecular weight: 10.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R6FBJ2|R6FBJ2_9BACE Transporter gate domain protein OS=Bacteroides sp. CAG:633 OX=1262744 GN=BN744_00813 PE=4 SV=1
MM1 pKa = 7.37EE2 pKa = 6.44PIRR5 pKa = 11.84NFDD8 pKa = 3.46QLTAHH13 pKa = 7.46LKK15 pKa = 8.81TLNKK19 pKa = 9.33RR20 pKa = 11.84KK21 pKa = 10.05RR22 pKa = 11.84IAVVCANDD30 pKa = 3.83PNTEE34 pKa = 4.08YY35 pKa = 10.81AISRR39 pKa = 11.84ALEE42 pKa = 3.65EE43 pKa = 5.14GIAEE47 pKa = 4.11FLMIGDD53 pKa = 3.91SAILEE58 pKa = 4.56KK59 pKa = 11.12YY60 pKa = 9.74PSLKK64 pKa = 10.53NYY66 pKa = 9.05PDD68 pKa = 3.84YY69 pKa = 11.69VHH71 pKa = 6.7TLHH74 pKa = 7.86VEE76 pKa = 4.41DD77 pKa = 5.01PDD79 pKa = 3.57EE80 pKa = 4.43AARR83 pKa = 11.84EE84 pKa = 3.88AVRR87 pKa = 11.84IVRR90 pKa = 11.84EE91 pKa = 4.18GGADD95 pKa = 2.97ILMKK99 pKa = 10.91GIINTDD105 pKa = 3.45NLLHH109 pKa = 7.4AILDD113 pKa = 4.01KK114 pKa = 11.34EE115 pKa = 4.46KK116 pKa = 11.14GLLPKK121 pKa = 10.77GKK123 pKa = 9.52ILTHH127 pKa = 6.22LAVMQIPTYY136 pKa = 10.94DD137 pKa = 3.29KK138 pKa = 11.43LLFFSDD144 pKa = 3.25AAVIPRR150 pKa = 11.84PTLQQRR156 pKa = 11.84IEE158 pKa = 4.28MIWYY162 pKa = 8.73AIRR165 pKa = 11.84ACRR168 pKa = 11.84HH169 pKa = 5.61FGIEE173 pKa = 3.72QPRR176 pKa = 11.84XLRR179 pKa = 11.84HH180 pKa = 5.6RR181 pKa = 11.84AAAHH185 pKa = 6.65RR186 pKa = 11.84PDD188 pKa = 3.37TLYY191 pKa = 11.36GEE193 pKa = 5.32GEE195 pKa = 4.08RR196 pKa = 11.84QVPPFAGLCEE206 pKa = 3.93HH207 pKa = 6.88RR208 pKa = 11.84RR209 pKa = 11.84TGRR212 pKa = 11.84SRR214 pKa = 11.84RR215 pKa = 11.84IRR217 pKa = 11.84QRR219 pKa = 11.84HH220 pKa = 4.44HH221 pKa = 6.34RR222 pKa = 11.84RR223 pKa = 11.84SAGRR227 pKa = 11.84EE228 pKa = 3.62NLVRR232 pKa = 11.84EE233 pKa = 4.41DD234 pKa = 3.31QRR236 pKa = 11.84RR237 pKa = 11.84HH238 pKa = 3.75QRR240 pKa = 11.84HH241 pKa = 5.48RR242 pKa = 11.84FAHH245 pKa = 4.46QRR247 pKa = 11.84RR248 pKa = 11.84GRR250 pKa = 11.84RR251 pKa = 11.84THH253 pKa = 7.03LPQHH257 pKa = 6.17RR258 pKa = 11.84VGQRR262 pKa = 11.84FLQSRR267 pKa = 11.84LPVLARR273 pKa = 11.84RR274 pKa = 11.84HH275 pKa = 4.76GRR277 pKa = 11.84IAARR281 pKa = 11.84PHH283 pKa = 6.09LSGGAALAQRR293 pKa = 11.84QRR295 pKa = 11.84TVEE298 pKa = 4.2VLQHH302 pKa = 5.59RR303 pKa = 11.84HH304 pKa = 5.51GLPDD308 pKa = 3.43EE309 pKa = 4.03QRR311 pKa = 11.84TGHH314 pKa = 5.76EE315 pKa = 4.33RR316 pKa = 11.84IKK318 pKa = 10.86QEE320 pKa = 3.63ASRR323 pKa = 11.84LTIHH327 pKa = 6.52HH328 pKa = 7.16LSFIIHH334 pKa = 6.76HH335 pKa = 5.44FHH337 pKa = 7.29EE338 pKa = 6.1DD339 pKa = 2.89ISHH342 pKa = 5.46QPRR345 pKa = 11.84LYY347 pKa = 10.54FDD349 pKa = 3.49EE350 pKa = 4.66DD351 pKa = 3.34CRR353 pKa = 11.84LRR355 pKa = 11.84RR356 pKa = 3.75

Molecular weight: 41.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3004

0

3004

1032115

29

1910

343.6

38.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.514 ± 0.047

1.342 ± 0.017

5.622 ± 0.03

6.516 ± 0.043

4.447 ± 0.027

6.898 ± 0.04

1.989 ± 0.022

6.347 ± 0.053

6.021 ± 0.042

9.377 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.76 ± 0.02

4.771 ± 0.042

3.811 ± 0.027

3.718 ± 0.029

5.008 ± 0.038

5.875 ± 0.037

5.597 ± 0.033

6.674 ± 0.044

1.294 ± 0.019

4.415 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski