Colletotrichum salicis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum acutatum species complex

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13783 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A135UHI2|A0A135UHI2_9PEZI Uncharacterized protein OS=Colletotrichum salicis OX=1209931 GN=CSAL01_05449 PE=4 SV=1
MM1 pKa = 7.98DD2 pKa = 5.15GSNTNSSYY10 pKa = 11.34LLSEE14 pKa = 4.09LNEE17 pKa = 4.37EE18 pKa = 4.14KK19 pKa = 10.6RR20 pKa = 11.84QTLRR24 pKa = 11.84TLANLSEE31 pKa = 4.23ADD33 pKa = 3.55FRR35 pKa = 11.84RR36 pKa = 11.84ATFLATLHH44 pKa = 6.01MISRR48 pKa = 11.84GPHH51 pKa = 4.06VTSTPLRR58 pKa = 11.84EE59 pKa = 4.11WQPPSTTTAGPSDD72 pKa = 3.77NLDD75 pKa = 3.64TEE77 pKa = 4.57DD78 pKa = 4.28LPGRR82 pKa = 11.84SDD84 pKa = 3.73FCNDD88 pKa = 3.07ASCPCKK94 pKa = 10.58SINSPADD101 pKa = 3.35PSNNTAPQNAARR113 pKa = 11.84GLFFGNDD120 pKa = 3.25TMSTLDD126 pKa = 5.0DD127 pKa = 4.42EE128 pKa = 5.31LCEE131 pKa = 4.17DD132 pKa = 4.13HH133 pKa = 7.66ARR135 pKa = 11.84MCGGEE140 pKa = 3.94YY141 pKa = 10.04CYY143 pKa = 10.62EE144 pKa = 3.91SSEE147 pKa = 4.3YY148 pKa = 10.55SDD150 pKa = 4.09SSEE153 pKa = 4.23SSGDD157 pKa = 3.56YY158 pKa = 11.19SEE160 pKa = 6.05MEE162 pKa = 4.63DD163 pKa = 4.58LDD165 pKa = 4.77DD166 pKa = 4.51FGKK169 pKa = 10.6ISVDD173 pKa = 2.93VDD175 pKa = 3.65DD176 pKa = 5.38YY177 pKa = 12.04VYY179 pKa = 11.43LDD181 pKa = 3.67ADD183 pKa = 3.89GNEE186 pKa = 4.57LDD188 pKa = 4.31SEE190 pKa = 4.95GPGLSDD196 pKa = 4.09LSYY199 pKa = 11.04DD200 pKa = 3.96FEE202 pKa = 6.08SMVCSNEE209 pKa = 3.76DD210 pKa = 4.07DD211 pKa = 4.1EE212 pKa = 5.53NKK214 pKa = 10.29EE215 pKa = 3.92

Molecular weight: 23.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A135S5S6|A0A135S5S6_9PEZI CFEM domain-containing protein OS=Colletotrichum salicis OX=1209931 GN=CSAL01_02869 PE=3 SV=1
MM1 pKa = 7.89RR2 pKa = 11.84LPLRR6 pKa = 11.84SATSTPLTRR15 pKa = 11.84TRR17 pKa = 11.84LRR19 pKa = 11.84SVMSTLSTSMRR30 pKa = 11.84PLPP33 pKa = 4.12

Molecular weight: 3.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13783

0

13783

6540505

15

8731

474.5

52.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.058 ± 0.02

1.224 ± 0.009

5.716 ± 0.017

6.026 ± 0.024

3.763 ± 0.013

7.15 ± 0.021

2.316 ± 0.009

4.778 ± 0.015

4.817 ± 0.021

8.664 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.211 ± 0.01

3.672 ± 0.011

6.127 ± 0.027

3.877 ± 0.014

5.904 ± 0.025

8.078 ± 0.023

6.121 ± 0.029

6.255 ± 0.017

1.515 ± 0.009

2.713 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski