Sugarcane bacilliform Guadeloupe D virus
Average proteome isoelectric point is 7.02
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|D0QEI9|D0QEI9_9VIRU Reverse transcriptase OS=Sugarcane bacilliform Guadeloupe D virus OX=1960253 PE=4 SV=1
MM1 pKa = 6.88 STRR4 pKa = 11.84 GRR6 pKa = 11.84 VTGTSSQTVTEE17 pKa = 4.45 PGQPLVEE24 pKa = 4.16 DD25 pKa = 3.59 QIRR28 pKa = 11.84 DD29 pKa = 3.36 YY30 pKa = 11.29 RR31 pKa = 11.84 RR32 pKa = 11.84 AQRR35 pKa = 11.84 ARR37 pKa = 11.84 HH38 pKa = 4.62 EE39 pKa = 4.24 AARR42 pKa = 11.84 VARR45 pKa = 11.84 NIGNIGRR52 pKa = 11.84 TIVGRR57 pKa = 11.84 QPRR60 pKa = 11.84 EE61 pKa = 3.69 HH62 pKa = 6.28 TLALLMNPEE71 pKa = 4.25 VEE73 pKa = 4.71 LQRR76 pKa = 11.84 SMQEE80 pKa = 3.73 RR81 pKa = 11.84 ARR83 pKa = 11.84 TVPAEE88 pKa = 3.97 VLYY91 pKa = 7.38 MTRR94 pKa = 11.84 RR95 pKa = 11.84 DD96 pKa = 4.35 DD97 pKa = 3.07 IHH99 pKa = 7.69 HH100 pKa = 6.53 RR101 pKa = 11.84 VYY103 pKa = 10.47 HH104 pKa = 5.76 HH105 pKa = 6.93 RR106 pKa = 11.84 SEE108 pKa = 4.07 EE109 pKa = 3.91 RR110 pKa = 11.84 MLVLRR115 pKa = 11.84 NDD117 pKa = 3.34 QQDD120 pKa = 3.11 RR121 pKa = 11.84 TFIQQEE127 pKa = 4.39 SYY129 pKa = 10.75 EE130 pKa = 4.22 ALAQAGLEE138 pKa = 4.19 YY139 pKa = 10.41 IHH141 pKa = 7.16 LGVLQVRR148 pKa = 11.84 FQILHH153 pKa = 5.83 RR154 pKa = 11.84 RR155 pKa = 11.84 YY156 pKa = 9.61 AGTVAFLVFRR166 pKa = 11.84 DD167 pKa = 4.07 TRR169 pKa = 11.84 WNEE172 pKa = 3.67 DD173 pKa = 3.24 DD174 pKa = 4.12 RR175 pKa = 11.84 SIIAAMEE182 pKa = 3.72 VDD184 pKa = 3.89 LAEE187 pKa = 4.59 GNQLVYY193 pKa = 10.29 VIPDD197 pKa = 2.71 IMMTIKK203 pKa = 10.62 DD204 pKa = 4.68 FYY206 pKa = 11.08 RR207 pKa = 11.84 HH208 pKa = 5.19 IQISIKK214 pKa = 9.77 TKK216 pKa = 10.6 GYY218 pKa = 7.52 DD219 pKa = 2.86 TWEE222 pKa = 4.28 GGEE225 pKa = 4.15 ANLLITRR232 pKa = 11.84 SITSRR237 pKa = 11.84 LSNTPNVGFAYY248 pKa = 9.75 KK249 pKa = 9.83 IEE251 pKa = 4.15 RR252 pKa = 11.84 VAEE255 pKa = 3.93 YY256 pKa = 10.53 LRR258 pKa = 11.84 SKK260 pKa = 10.21 GVKK263 pKa = 9.74 AINATKK269 pKa = 10.39 HH270 pKa = 5.05 SAKK273 pKa = 9.96 QFQGGEE279 pKa = 4.0 WTLKK283 pKa = 8.7 PSRR286 pKa = 11.84 VVVPMQPSSMNTSTKK301 pKa = 9.63 YY302 pKa = 10.5 DD303 pKa = 3.35 GSISIRR309 pKa = 11.84 FGDD312 pKa = 4.1 YY313 pKa = 9.18 EE314 pKa = 4.67 ASTSSRR320 pKa = 11.84 PPKK323 pKa = 10.78 YY324 pKa = 9.37 NTADD328 pKa = 3.73 DD329 pKa = 5.34 EE330 pKa = 4.5 IDD332 pKa = 3.34 SDD334 pKa = 4.26 EE335 pKa = 4.2 EE336 pKa = 3.84 HH337 pKa = 6.97 TIAMITEE344 pKa = 5.17 EE345 pKa = 3.98 IDD347 pKa = 2.78 EE348 pKa = 4.18 WLILAEE354 pKa = 4.01 EE355 pKa = 4.44 LGYY358 pKa = 11.01 DD359 pKa = 3.44 LTEE362 pKa = 4.28 EE363 pKa = 4.41 VEE365 pKa = 4.61 DD366 pKa = 4.15 VPPEE370 pKa = 3.78 QSSRR374 pKa = 11.84 SMVGEE379 pKa = 4.06 EE380 pKa = 4.44 KK381 pKa = 10.28 IISQFLEE388 pKa = 3.9 KK389 pKa = 11.0 LEE391 pKa = 4.5 LEE393 pKa = 4.41 EE394 pKa = 4.78 EE395 pKa = 4.47 TTSMASLNIAMMSEE409 pKa = 3.99 YY410 pKa = 10.29 PEE412 pKa = 4.12 LKK414 pKa = 10.31 KK415 pKa = 10.72 ISEE418 pKa = 4.42 LVNASSEE425 pKa = 4.47 VTSSYY430 pKa = 10.66 RR431 pKa = 11.84 PPEE434 pKa = 3.98 IDD436 pKa = 2.91 MTGPAGYY443 pKa = 10.57 APATSQQGWASSHH456 pKa = 6.72 PPTSGRR462 pKa = 11.84 NFRR465 pKa = 11.84 YY466 pKa = 9.48 KK467 pKa = 10.82 DD468 pKa = 3.26 PSGYY472 pKa = 9.89 FALPSAQQQNGSILLLSPTYY492 pKa = 9.0 DD493 pKa = 2.97 TKK495 pKa = 10.95 IFEE498 pKa = 4.42 RR499 pKa = 11.84 WEE501 pKa = 4.31 STTLNHH507 pKa = 6.57 MADD510 pKa = 3.38 KK511 pKa = 11.03 SFATAEE517 pKa = 4.07 DD518 pKa = 3.41 KK519 pKa = 11.1 LIYY522 pKa = 10.42 LEE524 pKa = 4.22 NLLGEE529 pKa = 4.34 MEE531 pKa = 4.6 KK532 pKa = 9.37 KK533 pKa = 8.84 TFQTWRR539 pKa = 11.84 MAFPTEE545 pKa = 3.96 FEE547 pKa = 4.21 LMKK550 pKa = 10.11 TQALGANGTQNSISQIRR567 pKa = 11.84 RR568 pKa = 11.84 IFYY571 pKa = 10.94 LEE573 pKa = 4.05 DD574 pKa = 4.21 PKK576 pKa = 11.1 TGSTTSQDD584 pKa = 3.24 AAYY587 pKa = 9.43 KK588 pKa = 10.04 AIKK591 pKa = 10.47 SLVCTDD597 pKa = 3.3 MSGIAIKK604 pKa = 10.23 RR605 pKa = 11.84 YY606 pKa = 7.58 MNSYY610 pKa = 9.21 MDD612 pKa = 4.52 LAATSGRR619 pKa = 11.84 MWVSAEE625 pKa = 3.91 LSDD628 pKa = 4.82 EE629 pKa = 4.55 FFTKK633 pKa = 10.55 LPNGLGDD640 pKa = 3.77 RR641 pKa = 11.84 VAKK644 pKa = 10.33 AFKK647 pKa = 9.78 EE648 pKa = 3.94 KK649 pKa = 10.82 HH650 pKa = 5.95 PGNTVGVPARR660 pKa = 11.84 VTFTQNYY667 pKa = 8.52 LEE669 pKa = 4.37 EE670 pKa = 4.39 VCRR673 pKa = 11.84 EE674 pKa = 3.74 AAYY677 pKa = 10.17 QRR679 pKa = 11.84 SLKK682 pKa = 10.78 NLDD685 pKa = 3.33 FCKK688 pKa = 10.21 EE689 pKa = 4.03 FPVPGYY695 pKa = 9.53 YY696 pKa = 10.12 KK697 pKa = 10.67 KK698 pKa = 10.3 PGYY701 pKa = 10.16 KK702 pKa = 9.29 YY703 pKa = 10.71 GRR705 pKa = 11.84 RR706 pKa = 11.84 KK707 pKa = 6.15 TTTYY711 pKa = 10.08 KK712 pKa = 10.68 GKK714 pKa = 8.62 PHH716 pKa = 6.26 KK717 pKa = 9.39 THH719 pKa = 5.8 VRR721 pKa = 11.84 IDD723 pKa = 3.39 KK724 pKa = 10.57 RR725 pKa = 11.84 KK726 pKa = 8.03 HH727 pKa = 4.78 LKK729 pKa = 9.21 NRR731 pKa = 11.84 KK732 pKa = 8.03 CKK734 pKa = 10.32 CYY736 pKa = 9.31 ACGEE740 pKa = 4.23 EE741 pKa = 3.83 GHH743 pKa = 6.28 YY744 pKa = 10.9 ASEE747 pKa = 4.29 CRR749 pKa = 11.84 NKK751 pKa = 10.17 KK752 pKa = 10.22 QYY754 pKa = 9.0 TDD756 pKa = 2.92 RR757 pKa = 11.84 VNIIEE762 pKa = 4.47 NIALKK767 pKa = 10.14 EE768 pKa = 3.99 DD769 pKa = 3.8 EE770 pKa = 5.09 EE771 pKa = 4.48 IVSVGEE777 pKa = 4.69 DD778 pKa = 3.51 EE779 pKa = 6.5 DD780 pKa = 4.15 EE781 pKa = 5.25 VSDD784 pKa = 3.35 IWSLSEE790 pKa = 4.61 GEE792 pKa = 4.54 DD793 pKa = 3.33 GHH795 pKa = 8.22 GEE797 pKa = 4.11 EE798 pKa = 5.01 EE799 pKa = 4.07 VAAMVFALEE808 pKa = 4.83 DD809 pKa = 3.82 EE810 pKa = 4.85 EE811 pKa = 4.91 EE812 pKa = 4.17 DD813 pKa = 3.89 TLIGKK818 pKa = 8.91 PGTWRR823 pKa = 11.84 SQVRR827 pKa = 11.84 VTRR830 pKa = 11.84 KK831 pKa = 9.52 EE832 pKa = 3.89 YY833 pKa = 10.9 EE834 pKa = 4.72 CIHH837 pKa = 6.28 LWDD840 pKa = 4.96 FNSEE844 pKa = 4.13 GYY846 pKa = 9.01 EE847 pKa = 3.8 KK848 pKa = 10.84 CKK850 pKa = 10.55 ACRR853 pKa = 11.84 LEE855 pKa = 4.1 ARR857 pKa = 11.84 ANEE860 pKa = 3.85 RR861 pKa = 11.84 MKK863 pKa = 10.95 CKK865 pKa = 9.09 EE866 pKa = 4.23 CKK868 pKa = 9.45 MVICCLCSNYY878 pKa = 9.96 CFDD881 pKa = 3.01 ITIPRR886 pKa = 11.84 EE887 pKa = 3.75 RR888 pKa = 11.84 SFSSQHH894 pKa = 6.56 HH895 pKa = 4.88 EE896 pKa = 4.32 PKK898 pKa = 9.72 WKK900 pKa = 10.42 EE901 pKa = 3.26 IATALGEE908 pKa = 4.17 INAKK912 pKa = 10.31 LEE914 pKa = 4.06 QEE916 pKa = 4.07 KK917 pKa = 10.65 KK918 pKa = 10.99 ALIEE922 pKa = 3.97 EE923 pKa = 4.56 LNRR926 pKa = 11.84 ALEE929 pKa = 3.91 QIKK932 pKa = 10.31 DD933 pKa = 3.91 YY934 pKa = 10.2 KK935 pKa = 10.89 QKK937 pKa = 10.84 GLPTAIIQEE946 pKa = 4.03 VDD948 pKa = 3.06 EE949 pKa = 4.92 SKK951 pKa = 9.83 TEE953 pKa = 3.79 EE954 pKa = 4.2 LEE956 pKa = 4.73 RR957 pKa = 11.84 EE958 pKa = 4.08 NEE960 pKa = 3.96 LLNAVLEE967 pKa = 4.57 KK968 pKa = 10.1 KK969 pKa = 10.53 DD970 pKa = 5.16 KK971 pKa = 10.46 EE972 pKa = 4.2 IKK974 pKa = 9.93 DD975 pKa = 3.68 LKK977 pKa = 10.97 EE978 pKa = 3.61 RR979 pKa = 11.84 LQWLSQEE986 pKa = 4.11 KK987 pKa = 9.62 VQMLTEE993 pKa = 4.15 EE994 pKa = 4.26 DD995 pKa = 3.66 EE996 pKa = 4.86 KK997 pKa = 11.56 VFSASGRR1004 pKa = 11.84 SGPRR1008 pKa = 11.84 YY1009 pKa = 9.19 NGLYY1013 pKa = 8.66 NVKK1016 pKa = 10.44 VGIEE1020 pKa = 3.85 VEE1022 pKa = 4.4 KK1023 pKa = 10.53 EE1024 pKa = 3.57 IKK1026 pKa = 9.72 YY1027 pKa = 10.84 LNAIVDD1033 pKa = 4.21 TGATTCVVRR1042 pKa = 11.84 EE1043 pKa = 3.96 ARR1045 pKa = 11.84 LTEE1048 pKa = 4.01 KK1049 pKa = 10.07 MLEE1052 pKa = 3.98 EE1053 pKa = 4.36 SPVNVTLRR1061 pKa = 11.84 GMNSISRR1068 pKa = 11.84 ASKK1071 pKa = 9.77 VVKK1074 pKa = 9.96 QGKK1077 pKa = 8.45 IWIGEE1082 pKa = 4.1 QYY1084 pKa = 10.51 FRR1086 pKa = 11.84 TPRR1089 pKa = 11.84 TFALDD1094 pKa = 3.17 ISLSGGIDD1102 pKa = 3.39 MILGCNFIRR1111 pKa = 11.84 SLEE1114 pKa = 4.15 GGVRR1118 pKa = 11.84 IEE1120 pKa = 4.52 GNDD1123 pKa = 2.85 ITFYY1127 pKa = 11.5 KK1128 pKa = 10.53 LVTSVRR1134 pKa = 11.84 TQRR1137 pKa = 11.84 EE1138 pKa = 3.89 AHH1140 pKa = 5.23 QVAAIEE1146 pKa = 4.03 EE1147 pKa = 4.42 LDD1149 pKa = 3.94 LNEE1152 pKa = 5.18 DD1153 pKa = 3.65 EE1154 pKa = 5.35 YY1155 pKa = 11.94 YY1156 pKa = 10.8 DD1157 pKa = 4.18 IAISDD1162 pKa = 3.63 QEE1164 pKa = 3.72 KK1165 pKa = 10.57 AYY1167 pKa = 9.9 INKK1170 pKa = 9.84 EE1171 pKa = 3.93 IVDD1174 pKa = 3.57 SSIFRR1179 pKa = 11.84 RR1180 pKa = 11.84 LKK1182 pKa = 8.11 EE1183 pKa = 3.5 LGYY1186 pKa = 10.36 IGEE1189 pKa = 4.63 EE1190 pKa = 4.08 PLKK1193 pKa = 10.3 HH1194 pKa = 5.13 WRR1196 pKa = 11.84 KK1197 pKa = 8.81 NQVKK1201 pKa = 10.19 CSLEE1205 pKa = 3.75 IKK1207 pKa = 10.11 NPDD1210 pKa = 3.64 MIIEE1214 pKa = 4.37 DD1215 pKa = 4.08 RR1216 pKa = 11.84 PLKK1219 pKa = 10.64 HH1220 pKa = 5.73 VTPKK1224 pKa = 10.15 MKK1226 pKa = 10.33 EE1227 pKa = 3.79 QMKK1230 pKa = 10.34 KK1231 pKa = 9.86 HH1232 pKa = 5.2 VDD1234 pKa = 3.03 KK1235 pKa = 11.19 LLEE1238 pKa = 4.31 LKK1240 pKa = 10.44 VIRR1243 pKa = 11.84 PSTSKK1248 pKa = 10.43 HH1249 pKa = 4.49 RR1250 pKa = 11.84 TTAMIVEE1257 pKa = 4.87 SGTEE1261 pKa = 3.74 IDD1263 pKa = 4.11 PKK1265 pKa = 10.31 TGQEE1269 pKa = 3.86 KK1270 pKa = 10.19 RR1271 pKa = 11.84 GKK1273 pKa = 9.41 EE1274 pKa = 3.56 RR1275 pKa = 11.84 LVFNYY1280 pKa = 9.57 KK1281 pKa = 10.11 RR1282 pKa = 11.84 LNDD1285 pKa = 3.67 NTEE1288 pKa = 3.67 KK1289 pKa = 10.83 DD1290 pKa = 3.75 QYY1292 pKa = 10.96 SLPGINTIIQRR1303 pKa = 11.84 IGRR1306 pKa = 11.84 SKK1308 pKa = 10.3 IYY1310 pKa = 10.79 SKK1312 pKa = 11.19 FDD1314 pKa = 3.64 LKK1316 pKa = 11.29 SGFHH1320 pKa = 4.69 QVAMEE1325 pKa = 4.05 EE1326 pKa = 4.58 ASIPWTAFWAIDD1338 pKa = 3.73 GLYY1341 pKa = 9.3 EE1342 pKa = 4.03 WLVMPFGLKK1351 pKa = 9.49 NAPAVFQRR1359 pKa = 11.84 KK1360 pKa = 7.76 MDD1362 pKa = 3.33 NCFRR1366 pKa = 11.84 GTEE1369 pKa = 4.0 EE1370 pKa = 4.68 FIAVYY1375 pKa = 10.1 IDD1377 pKa = 5.0 DD1378 pKa = 3.98 ILIFSEE1384 pKa = 4.85 SPQQHH1389 pKa = 4.79 VQHH1392 pKa = 6.71 LKK1394 pKa = 10.72 KK1395 pKa = 10.8 FMEE1398 pKa = 4.39 ICEE1401 pKa = 4.26 KK1402 pKa = 10.85 NGLVLSPTKK1411 pKa = 10.28 MKK1413 pKa = 10.45 IGVSQVDD1420 pKa = 3.7 FLGATIGQSKK1430 pKa = 9.85 IRR1432 pKa = 11.84 LQPHH1436 pKa = 7.05 IIKK1439 pKa = 10.42 KK1440 pKa = 9.9 IADD1443 pKa = 3.73 FEE1445 pKa = 4.45 DD1446 pKa = 3.66 EE1447 pKa = 4.51 KK1448 pKa = 11.53 LKK1450 pKa = 9.25 EE1451 pKa = 4.52 TKK1453 pKa = 10.19 GLRR1456 pKa = 11.84 SWLGILNYY1464 pKa = 9.98 ARR1466 pKa = 11.84 NYY1468 pKa = 9.59 IPNLGKK1474 pKa = 8.46 TLGPLYY1480 pKa = 10.78 SKK1482 pKa = 10.79 VSPTGEE1488 pKa = 3.41 KK1489 pKa = 10.48 RR1490 pKa = 11.84 MNHH1493 pKa = 5.45 QDD1495 pKa = 2.56 WVLINKK1501 pKa = 7.77 VKK1503 pKa = 10.62 RR1504 pKa = 11.84 QVKK1507 pKa = 9.19 EE1508 pKa = 4.04 LEE1510 pKa = 4.29 DD1511 pKa = 3.63 MEE1513 pKa = 4.82 LPPVEE1518 pKa = 4.05 ACIVLEE1524 pKa = 4.21 TDD1526 pKa = 3.02 GCMEE1530 pKa = 4.24 GWGGVCKK1537 pKa = 10.22 WKK1539 pKa = 10.95 LPGQNKK1545 pKa = 9.81 ASEE1548 pKa = 4.63 KK1549 pKa = 8.71 ICAYY1553 pKa = 10.49 ASGKK1557 pKa = 9.95 FSPIKK1562 pKa = 9.74 STIDD1566 pKa = 3.27 AEE1568 pKa = 4.13 IQAVINSLDD1577 pKa = 3.29 KK1578 pKa = 11.18 FKK1580 pKa = 10.59 IYY1582 pKa = 10.97 YY1583 pKa = 9.71 LDD1585 pKa = 3.39 KK1586 pKa = 10.74 KK1587 pKa = 10.6 KK1588 pKa = 10.72 IIIRR1592 pKa = 11.84 TDD1594 pKa = 3.14 CQAIVAFYY1602 pKa = 11.31 SKK1604 pKa = 10.26 IAQNKK1609 pKa = 7.19 PSRR1612 pKa = 11.84 VRR1614 pKa = 11.84 WLTFSDD1620 pKa = 5.19 FISGLGVQVSFEE1632 pKa = 4.78 HH1633 pKa = 7.58 IDD1635 pKa = 3.66 GKK1637 pKa = 10.96 DD1638 pKa = 3.12 NTIANTLSRR1647 pKa = 11.84 LVHH1650 pKa = 6.65 ILIKK1654 pKa = 10.92 EE1655 pKa = 3.99 EE1656 pKa = 3.91 DD1657 pKa = 3.39 QEE1659 pKa = 4.7 LINKK1663 pKa = 8.98 IMVLWEE1669 pKa = 4.26 KK1670 pKa = 9.91 KK1671 pKa = 9.06 TEE1673 pKa = 4.07 DD1674 pKa = 3.68 VMHH1677 pKa = 6.91 INDD1680 pKa = 4.66 NPLLVCGCGIPAVQRR1695 pKa = 11.84 EE1696 pKa = 4.55 SRR1698 pKa = 11.84 TSRR1701 pKa = 11.84 NPNRR1705 pKa = 11.84 KK1706 pKa = 8.56 FVTCRR1711 pKa = 11.84 DD1712 pKa = 3.37 NRR1714 pKa = 11.84 CRR1716 pKa = 11.84 CWWWSDD1722 pKa = 3.73 NIDD1725 pKa = 3.63 DD1726 pKa = 4.04 YY1727 pKa = 10.2 TRR1729 pKa = 11.84 RR1730 pKa = 11.84 MIDD1733 pKa = 3.64 LAQEE1737 pKa = 3.71 EE1738 pKa = 4.43 ADD1740 pKa = 3.35 YY1741 pKa = 11.51 DD1742 pKa = 3.72 EE1743 pKa = 5.12 AMRR1746 pKa = 11.84 RR1747 pKa = 11.84 YY1748 pKa = 9.89 HH1749 pKa = 7.53 EE1750 pKa = 4.28 EE1751 pKa = 3.91 LQEE1754 pKa = 4.2 KK1755 pKa = 10.28 KK1756 pKa = 10.61 LDD1758 pKa = 3.51 LMQINEE1764 pKa = 4.27 ALEE1767 pKa = 3.98 AAEE1770 pKa = 4.27 DD1771 pKa = 3.51 QDD1773 pKa = 3.53 RR1774 pKa = 11.84 RR1775 pKa = 11.84 EE1776 pKa = 4.25 GVISDD1781 pKa = 4.32 ADD1783 pKa = 3.59 FEE1785 pKa = 5.44 PNVIRR1790 pKa = 11.84 DD1791 pKa = 3.79 DD1792 pKa = 3.67
Molecular weight: 205.79 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.777
IPC2_protein 5.804
IPC_protein 5.83
Toseland 6.109
ProMoST 6.109
Dawson 6.033
Bjellqvist 6.071
Wikipedia 6.02
Rodwell 6.02
Grimsley 6.211
Solomon 6.033
Lehninger 6.02
Nozaki 6.287
DTASelect 6.453
Thurlkill 6.44
EMBOSS 6.402
Sillero 6.376
Patrickios 4.342
IPC_peptide 6.046
IPC2_peptide 6.338
IPC2.peptide.svr19 6.404
Protein with the highest isoelectric point:
>tr|D0QEI9|D0QEI9_9VIRU Reverse transcriptase OS=Sugarcane bacilliform Guadeloupe D virus OX=1960253 PE=4 SV=1
MM1 pKa = 7.58 SIANTRR7 pKa = 11.84 ASVAYY12 pKa = 10.04 QEE14 pKa = 5.15 ALAATKK20 pKa = 8.36 TLWEE24 pKa = 4.94 DD25 pKa = 3.0 NSTGLIEE32 pKa = 5.56 KK33 pKa = 10.4 SDD35 pKa = 3.69 GANNTNSARR44 pKa = 11.84 QGNTIVFLLVRR55 pKa = 11.84 IDD57 pKa = 3.68 AKK59 pKa = 10.86 LAEE62 pKa = 4.65 LSEE65 pKa = 4.45 KK66 pKa = 9.12 VTQLEE71 pKa = 4.04 VRR73 pKa = 11.84 IKK75 pKa = 10.65 NIEE78 pKa = 4.16 KK79 pKa = 10.42 AKK81 pKa = 10.78 QPTQDD86 pKa = 2.87 FKK88 pKa = 11.35 TNLEE92 pKa = 4.42 EE93 pKa = 3.97 ITKK96 pKa = 10.25 KK97 pKa = 10.68 ISDD100 pKa = 4.28 LKK102 pKa = 10.98 ISDD105 pKa = 3.67 KK106 pKa = 10.97 PKK108 pKa = 10.71 EE109 pKa = 3.91 KK110 pKa = 10.73 GGNLKK115 pKa = 9.89 VLRR118 pKa = 11.84 NPYY121 pKa = 10.32 DD122 pKa = 3.16 ILKK125 pKa = 10.33 SIKK128 pKa = 10.04 NN129 pKa = 3.59
Molecular weight: 14.37 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.669
IPC2_protein 8.712
IPC_protein 8.639
Toseland 9.765
ProMoST 9.238
Dawson 9.867
Bjellqvist 9.428
Wikipedia 9.955
Rodwell 10.599
Grimsley 9.897
Solomon 9.911
Lehninger 9.911
Nozaki 9.706
DTASelect 9.428
Thurlkill 9.75
EMBOSS 10.131
Sillero 9.78
Patrickios 10.379
IPC_peptide 9.926
IPC2_peptide 7.732
IPC2.peptide.svr19 7.726
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2097
129
1792
699.0
80.12
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.342 ± 0.787
1.526 ± 0.605
5.436 ± 0.493
9.967 ± 0.745
2.861 ± 0.363
5.246 ± 0.653
1.86 ± 0.531
7.392 ± 0.312
8.441 ± 1.727
8.059 ± 1.754
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.384 ± 0.862
4.387 ± 1.157
3.338 ± 0.872
4.483 ± 1.32
6.199 ± 0.831
6.39 ± 0.242
5.484 ± 0.912
5.579 ± 0.415
1.478 ± 0.184
3.147 ± 1.271
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here