Capim virus
Average proteome isoelectric point is 7.17
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A142K3K3|A0A142K3K3_9VIRU Nucleocapsid protein OS=Capim virus OX=35312 PE=3 SV=1
MM1 pKa = 7.31 AHH3 pKa = 8.05 LIRR6 pKa = 11.84 EE7 pKa = 4.51 LVRR10 pKa = 11.84 QYY12 pKa = 10.64 RR13 pKa = 11.84 ARR15 pKa = 11.84 IRR17 pKa = 11.84 ACTQPEE23 pKa = 4.4 LGRR26 pKa = 11.84 DD27 pKa = 3.14 ILTEE31 pKa = 3.69 ITVARR36 pKa = 11.84 HH37 pKa = 5.5 NYY39 pKa = 8.06 FAQEE43 pKa = 4.12 FCEE46 pKa = 4.42 STNIPYY52 pKa = 10.66 RR53 pKa = 11.84 NDD55 pKa = 2.99 VPALEE60 pKa = 4.45 IVQAIRR66 pKa = 11.84 PDD68 pKa = 4.06 FDD70 pKa = 3.78 PMTRR74 pKa = 11.84 RR75 pKa = 11.84 IPDD78 pKa = 3.98 LTPDD82 pKa = 2.99 NYY84 pKa = 11.3 YY85 pKa = 10.06 IDD87 pKa = 4.11 GEE89 pKa = 4.2 KK90 pKa = 9.87 MYY92 pKa = 10.55 IIDD95 pKa = 4.13 FKK97 pKa = 11.61 VSVSDD102 pKa = 3.43 EE103 pKa = 4.49 SSIHH107 pKa = 4.86 TYY109 pKa = 10.07 RR110 pKa = 11.84 RR111 pKa = 11.84 YY112 pKa = 8.91 TEE114 pKa = 3.9 LLGDD118 pKa = 3.35 IFEE121 pKa = 5.1 FIGVEE126 pKa = 3.92 MEE128 pKa = 4.18 VVIIRR133 pKa = 11.84 MDD135 pKa = 3.89 PSNMQLHH142 pKa = 6.55 ISSDD146 pKa = 3.21 NFLQLFPNIILNLDD160 pKa = 3.74 FNWYY164 pKa = 8.98 FQLKK168 pKa = 9.64 EE169 pKa = 3.79 EE170 pKa = 4.11 LFEE173 pKa = 4.26 RR174 pKa = 11.84 FRR176 pKa = 11.84 DD177 pKa = 3.69 NEE179 pKa = 4.05 DD180 pKa = 3.14 FMEE183 pKa = 4.44 LVAHH187 pKa = 6.85 GEE189 pKa = 4.21 FTPTIPWTNEE199 pKa = 3.22 EE200 pKa = 4.11 TPEE203 pKa = 4.11 LFEE206 pKa = 4.8 HH207 pKa = 6.09 PVFRR211 pKa = 11.84 EE212 pKa = 3.97 FLNSMPEE219 pKa = 3.72 RR220 pKa = 11.84 EE221 pKa = 3.86 RR222 pKa = 11.84 ANFQRR227 pKa = 11.84 ALNNNAFQSDD237 pKa = 3.3 KK238 pKa = 11.09 WNDD241 pKa = 3.6 LLHH244 pKa = 5.94 TMMRR248 pKa = 11.84 EE249 pKa = 3.68 YY250 pKa = 11.12 GDD252 pKa = 3.37 NYY254 pKa = 9.8 KK255 pKa = 9.42 TFIKK259 pKa = 10.71 DD260 pKa = 2.89 MAKK263 pKa = 9.88 RR264 pKa = 11.84 VFIADD269 pKa = 3.41 EE270 pKa = 4.52 NYY272 pKa = 10.33 NKK274 pKa = 10.05 PSRR277 pKa = 11.84 SEE279 pKa = 3.72 IQKK282 pKa = 9.73 GWNEE286 pKa = 3.85 MISRR290 pKa = 11.84 VRR292 pKa = 11.84 EE293 pKa = 4.1 SRR295 pKa = 11.84 EE296 pKa = 3.74 MTCDD300 pKa = 2.99 VHH302 pKa = 7.02 KK303 pKa = 10.36 QKK305 pKa = 10.85 PSIHH309 pKa = 6.56 FIWSPHH315 pKa = 5.09 NPEE318 pKa = 3.61 ITNEE322 pKa = 3.84 NTAKK326 pKa = 10.5 ILRR329 pKa = 11.84 LSKK332 pKa = 10.45 GLQQIKK338 pKa = 10.22 EE339 pKa = 4.16 RR340 pKa = 11.84 DD341 pKa = 3.67 NMSLAFKK348 pKa = 10.83 SLGKK352 pKa = 10.9 LMDD355 pKa = 4.34 FSSDD359 pKa = 3.01 VRR361 pKa = 11.84 GYY363 pKa = 11.14 EE364 pKa = 4.01 RR365 pKa = 11.84 FCNKK369 pKa = 9.63 LKK371 pKa = 10.49 QDD373 pKa = 3.51 ARR375 pKa = 11.84 STPKK379 pKa = 10.57 KK380 pKa = 8.59 KK381 pKa = 7.58 TQKK384 pKa = 10.0 IEE386 pKa = 3.79 PLVIDD391 pKa = 4.46 DD392 pKa = 5.17 CTILWEE398 pKa = 4.34 QQFKK402 pKa = 10.5 MDD404 pKa = 3.96 TNVIQKK410 pKa = 10.1 DD411 pKa = 3.19 IRR413 pKa = 11.84 LKK415 pKa = 10.46 FLKK418 pKa = 9.57 EE419 pKa = 3.48 FCGIGNHH426 pKa = 5.57 KK427 pKa = 9.16 QFKK430 pKa = 10.71 DD431 pKa = 3.78 RR432 pKa = 11.84 MLDD435 pKa = 3.91 DD436 pKa = 5.71 LDD438 pKa = 4.59 LNKK441 pKa = 9.12 PTILDD446 pKa = 3.83 FSNIEE451 pKa = 4.08 IQRR454 pKa = 11.84 HH455 pKa = 4.99 ANLMFQDD462 pKa = 4.1 TKK464 pKa = 11.58 SLLSKK469 pKa = 10.72 QSGLSKK475 pKa = 10.48 VGNIMDD481 pKa = 3.89 EE482 pKa = 4.42 FEE484 pKa = 4.45 EE485 pKa = 5.51 KK486 pKa = 8.94 ITNANKK492 pKa = 8.84 DD493 pKa = 2.99 TWEE496 pKa = 4.41 TIEE499 pKa = 4.79 SVAKK503 pKa = 9.48 TRR505 pKa = 11.84 FWQAINDD512 pKa = 3.56 FSVIIKK518 pKa = 10.46 NILSVSQYY526 pKa = 10.08 NRR528 pKa = 11.84 HH529 pKa = 3.79 NTFRR533 pKa = 11.84 VVCSANNQFFGIVYY547 pKa = 8.82 PSASIQSRR555 pKa = 11.84 KK556 pKa = 6.91 STIVFSTIAFHH567 pKa = 7.86 DD568 pKa = 3.83 EE569 pKa = 3.94 AKK571 pKa = 10.65 DD572 pKa = 3.67 VLKK575 pKa = 10.85 CGSLFRR581 pKa = 11.84 TYY583 pKa = 10.49 KK584 pKa = 9.13 IDD586 pKa = 3.26 KK587 pKa = 9.8 GFVSISKK594 pKa = 10.45 AIRR597 pKa = 11.84 LDD599 pKa = 3.32 KK600 pKa = 10.58 EE601 pKa = 3.76 RR602 pKa = 11.84 CQRR605 pKa = 11.84 LVTSPGIFLLTTLLFKK621 pKa = 10.97 GQTDD625 pKa = 3.09 IDD627 pKa = 4.39 LNEE630 pKa = 3.64 IMAFAFFTSLSITKK644 pKa = 10.46 SMLSLTEE651 pKa = 3.7 PSRR654 pKa = 11.84 YY655 pKa = 9.4 MIMNSLAVSSHH666 pKa = 3.46 VRR668 pKa = 11.84 EE669 pKa = 4.35 YY670 pKa = 10.44 IAEE673 pKa = 4.21 KK674 pKa = 10.13 FSPYY678 pKa = 9.91 TKK680 pKa = 9.97 TLFSVYY686 pKa = 7.18 MTEE689 pKa = 5.43 LIRR692 pKa = 11.84 KK693 pKa = 9.03 GCMSANNQRR702 pKa = 11.84 TKK704 pKa = 10.82 ISVKK708 pKa = 10.49 DD709 pKa = 3.54 VFLNEE714 pKa = 3.9 YY715 pKa = 10.15 EE716 pKa = 4.1 ITQKK720 pKa = 10.81 GVSDD724 pKa = 3.66 ARR726 pKa = 11.84 DD727 pKa = 3.46 LEE729 pKa = 5.13 SIWFPGHH736 pKa = 6.28 VNLKK740 pKa = 10.19 EE741 pKa = 4.21 YY742 pKa = 10.48 INQIYY747 pKa = 10.44 LPFYY751 pKa = 10.14 FNAKK755 pKa = 9.15 GLHH758 pKa = 5.86 NKK760 pKa = 8.93 HH761 pKa = 6.15 HH762 pKa = 6.48 VIIDD766 pKa = 3.66 LAKK769 pKa = 8.51 TVLEE773 pKa = 4.24 IEE775 pKa = 4.25 LEE777 pKa = 4.13 QRR779 pKa = 11.84 EE780 pKa = 4.37 QLPNPWGSEE789 pKa = 3.94 FKK791 pKa = 10.55 KK792 pKa = 10.78 QSVNLDD798 pKa = 3.11 ILIYY802 pKa = 10.5 AISKK806 pKa = 7.98 MLKK809 pKa = 9.98 NDD811 pKa = 3.62 TSKK814 pKa = 11.04 HH815 pKa = 3.61 NHH817 pKa = 4.92 LRR819 pKa = 11.84 SRR821 pKa = 11.84 VEE823 pKa = 3.39 NRR825 pKa = 11.84 NNFKK829 pKa = 10.7 RR830 pKa = 11.84 SLASISTFTSSKK842 pKa = 9.92 SCIKK846 pKa = 10.37 IGDD849 pKa = 3.9 FSEE852 pKa = 4.32 HH853 pKa = 6.74 KK854 pKa = 10.32 SDD856 pKa = 3.34 IVKK859 pKa = 10.34 RR860 pKa = 11.84 MKK862 pKa = 10.43 KK863 pKa = 9.21 IQNKK867 pKa = 5.43 EE868 pKa = 3.73 AKK870 pKa = 8.09 RR871 pKa = 11.84 TRR873 pKa = 11.84 IANTEE878 pKa = 3.94 FVADD882 pKa = 4.28 DD883 pKa = 3.92 EE884 pKa = 4.96 RR885 pKa = 11.84 DD886 pKa = 3.55 LEE888 pKa = 4.58 ISHH891 pKa = 6.02 STYY894 pKa = 11.22 LDD896 pKa = 3.62 LLKK899 pKa = 10.76 SIPNYY904 pKa = 9.39 TDD906 pKa = 3.6 YY907 pKa = 11.3 ISTKK911 pKa = 10.13 VFDD914 pKa = 4.41 RR915 pKa = 11.84 LYY917 pKa = 10.64 EE918 pKa = 3.83 MFKK921 pKa = 10.2 IGEE924 pKa = 4.11 YY925 pKa = 10.24 DD926 pKa = 3.42 DD927 pKa = 5.11 RR928 pKa = 11.84 PAVEE932 pKa = 5.17 IIMEE936 pKa = 4.07 VMKK939 pKa = 10.59 NHH941 pKa = 7.18 KK942 pKa = 9.84 DD943 pKa = 3.52 FKK945 pKa = 11.13 FCFFNKK951 pKa = 9.28 GQKK954 pKa = 6.26 TAKK957 pKa = 10.03 DD958 pKa = 3.32 RR959 pKa = 11.84 EE960 pKa = 4.35 IFVGEE965 pKa = 4.51 LEE967 pKa = 4.95 AKK969 pKa = 10.02 LCLYY973 pKa = 10.22 CVEE976 pKa = 5.0 RR977 pKa = 11.84 ISKK980 pKa = 8.54 EE981 pKa = 3.8 RR982 pKa = 11.84 CKK984 pKa = 10.83 LNPEE988 pKa = 4.09 EE989 pKa = 4.85 MISEE993 pKa = 4.51 PGDD996 pKa = 3.55 GKK998 pKa = 10.93 LKK1000 pKa = 10.5 KK1001 pKa = 10.6 LEE1003 pKa = 4.22 INSEE1007 pKa = 4.05 SEE1009 pKa = 3.69 LRR1011 pKa = 11.84 YY1012 pKa = 9.82 LIEE1015 pKa = 3.63 MTRR1018 pKa = 11.84 RR1019 pKa = 11.84 EE1020 pKa = 4.16 LSKK1023 pKa = 10.6 EE1024 pKa = 3.97 DD1025 pKa = 3.54 KK1026 pKa = 10.78 FLGEE1030 pKa = 4.36 LTSEE1034 pKa = 4.11 PKK1036 pKa = 10.49 GIKK1039 pKa = 9.56 IEE1041 pKa = 4.28 INADD1045 pKa = 3.24 MSKK1048 pKa = 10.21 WSAQDD1053 pKa = 3.37 VFFKK1057 pKa = 10.47 YY1058 pKa = 10.17 FWLIALDD1065 pKa = 4.42 PILYY1069 pKa = 9.59 PNEE1072 pKa = 4.02 KK1073 pKa = 9.94 QRR1075 pKa = 11.84 ILYY1078 pKa = 7.29 FFCNYY1083 pKa = 8.29 MDD1085 pKa = 5.11 KK1086 pKa = 11.07 EE1087 pKa = 4.48 LILPDD1092 pKa = 4.12 EE1093 pKa = 4.76 LMCSLLDD1100 pKa = 3.62 QKK1102 pKa = 11.31 AEE1104 pKa = 3.99 RR1105 pKa = 11.84 EE1106 pKa = 3.81 NDD1108 pKa = 3.62 IIRR1111 pKa = 11.84 QMTNNFHH1118 pKa = 6.63 TNTVNIRR1125 pKa = 11.84 RR1126 pKa = 11.84 NWLQGNLNYY1135 pKa = 9.69 TSSYY1139 pKa = 9.82 IHH1141 pKa = 6.58 SCSMMVFRR1149 pKa = 11.84 DD1150 pKa = 3.61 IVKK1153 pKa = 9.84 EE1154 pKa = 3.95 CSDD1157 pKa = 4.22 LLEE1160 pKa = 4.8 GNCNVNSMVHH1170 pKa = 6.67 SDD1172 pKa = 3.89 DD1173 pKa = 3.91 NQTSVIMIQDD1183 pKa = 3.81 KK1184 pKa = 10.6 LHH1186 pKa = 6.63 NDD1188 pKa = 3.93 CILNYY1193 pKa = 9.74 ICSLFEE1199 pKa = 4.14 ACCLTFGNQANMKK1212 pKa = 8.37 KK1213 pKa = 8.88 TYY1215 pKa = 8.06 ITNNIKK1221 pKa = 10.69 EE1222 pKa = 4.33 FVSLFNIYY1230 pKa = 10.55 GEE1232 pKa = 4.16 PFSVYY1237 pKa = 10.58 GRR1239 pKa = 11.84 FLLPAVGDD1247 pKa = 3.79 CAYY1250 pKa = 9.78 IGPYY1254 pKa = 10.2 EE1255 pKa = 4.5 DD1256 pKa = 3.13 MASRR1260 pKa = 11.84 LSATQTAIKK1269 pKa = 9.76 HH1270 pKa = 5.3 GCPPSLAWVSIALNHH1285 pKa = 7.22 WITFSTYY1292 pKa = 11.21 NMLPGQTNDD1301 pKa = 3.1 PTKK1304 pKa = 10.96 VFDD1307 pKa = 4.45 CARR1310 pKa = 11.84 SDD1312 pKa = 5.09 LPIEE1316 pKa = 4.18 LCGLLKK1322 pKa = 10.59 ADD1324 pKa = 4.88 LSTIALVGLEE1334 pKa = 4.1 SGNISFLTNLLRR1346 pKa = 11.84 KK1347 pKa = 8.84 MSPPQLIKK1355 pKa = 10.84 EE1356 pKa = 4.59 GVQSQCNNIQNWDD1369 pKa = 3.64 LTKK1372 pKa = 9.89 LTNMEE1377 pKa = 4.05 VLKK1380 pKa = 10.89 LKK1382 pKa = 9.91 ILRR1385 pKa = 11.84 YY1386 pKa = 9.38 IVLDD1390 pKa = 3.57 TDD1392 pKa = 3.31 ITDD1395 pKa = 4.1 DD1396 pKa = 3.47 NTMGEE1401 pKa = 4.18 TSEE1404 pKa = 4.12 MKK1406 pKa = 10.05 SRR1408 pKa = 11.84 SIITPRR1414 pKa = 11.84 KK1415 pKa = 7.72 FTTLSSLTKK1424 pKa = 9.85 LVSYY1428 pKa = 11.14 NDD1430 pKa = 3.64 YY1431 pKa = 11.4 QNVVSNANLLDD1442 pKa = 3.89 EE1443 pKa = 5.3 LLEE1446 pKa = 4.35 NMLEE1450 pKa = 4.1 NQEE1453 pKa = 4.36 LLVTKK1458 pKa = 10.6 GEE1460 pKa = 4.12 SSEE1463 pKa = 4.49 DD1464 pKa = 3.38 FRR1466 pKa = 11.84 NTILFRR1472 pKa = 11.84 YY1473 pKa = 8.76 NSKK1476 pKa = 10.45 KK1477 pKa = 10.48 FKK1479 pKa = 10.28 EE1480 pKa = 4.29 SLSIQSPTQLFVEE1493 pKa = 4.8 QILFSNKK1500 pKa = 9.72 PIIDD1504 pKa = 3.5 YY1505 pKa = 11.05 SGIRR1509 pKa = 11.84 EE1510 pKa = 4.26 KK1511 pKa = 11.27 YY1512 pKa = 9.41 VGLVDD1517 pKa = 4.34 IPNNQEE1523 pKa = 3.81 DD1524 pKa = 4.04 EE1525 pKa = 4.74 GIMGKK1530 pKa = 8.21 KK1531 pKa = 8.65 TIPEE1535 pKa = 3.84 ALEE1538 pKa = 3.63 ILRR1541 pKa = 11.84 NDD1543 pKa = 4.35 LNRR1546 pKa = 11.84 MILTLDD1552 pKa = 4.43 DD1553 pKa = 3.65 IKK1555 pKa = 11.01 LVYY1558 pKa = 10.25 SFCILNDD1565 pKa = 3.93 PLNTTACNAILLSQIQSLMDD1585 pKa = 3.77 RR1586 pKa = 11.84 TSMSAVTMPEE1596 pKa = 3.81 FRR1598 pKa = 11.84 NMRR1601 pKa = 11.84 LIKK1604 pKa = 10.28 YY1605 pKa = 10.06 SPALVLRR1612 pKa = 11.84 AYY1614 pKa = 10.67 LHH1616 pKa = 6.82 GDD1618 pKa = 3.16 MSIGGAVEE1626 pKa = 3.52 EE1627 pKa = 4.47 DD1628 pKa = 3.35 MRR1630 pKa = 11.84 RR1631 pKa = 11.84 DD1632 pKa = 3.54 LYY1634 pKa = 11.19 HH1635 pKa = 8.31 LEE1637 pKa = 3.97 EE1638 pKa = 5.69 FINQTGILRR1647 pKa = 11.84 KK1648 pKa = 10.02 VEE1650 pKa = 3.98 ARR1652 pKa = 11.84 IQAHH1656 pKa = 5.14 QIEE1659 pKa = 4.68 NGARR1663 pKa = 11.84 DD1664 pKa = 3.7 MLFEE1668 pKa = 4.17 IRR1670 pKa = 11.84 EE1671 pKa = 4.17 RR1672 pKa = 11.84 TKK1674 pKa = 10.69 FLQTCYY1680 pKa = 10.84 DD1681 pKa = 3.97 YY1682 pKa = 11.19 IKK1684 pKa = 10.01 STEE1687 pKa = 3.85 HH1688 pKa = 5.74 RR1689 pKa = 11.84 VKK1691 pKa = 11.05 VFILPCKK1698 pKa = 10.22 AYY1700 pKa = 9.13 TAFDD1704 pKa = 3.99 FCATIHH1710 pKa = 6.54 GNLIKK1715 pKa = 10.85 DD1716 pKa = 3.53 KK1717 pKa = 9.99 GWYY1720 pKa = 8.34 SVHH1723 pKa = 5.97 YY1724 pKa = 9.18 LKK1726 pKa = 10.86 QIISGTAKK1734 pKa = 10.6 AIVNQSPASEE1744 pKa = 4.2 QINMDD1749 pKa = 3.13 EE1750 pKa = 4.45 CFRR1753 pKa = 11.84 LVSHH1757 pKa = 7.27 FADD1760 pKa = 3.73 TFIEE1764 pKa = 4.57 PSSRR1768 pKa = 11.84 LYY1770 pKa = 10.69 FADD1773 pKa = 5.2 KK1774 pKa = 10.19 IIKK1777 pKa = 9.46 NYY1779 pKa = 9.63 RR1780 pKa = 11.84 YY1781 pKa = 10.63 KK1782 pKa = 10.8 NIPVIDD1788 pKa = 5.34 LYY1790 pKa = 11.58 NQLKK1794 pKa = 10.13 RR1795 pKa = 11.84 DD1796 pKa = 3.6 ANKK1799 pKa = 9.79 RR1800 pKa = 11.84 QHH1802 pKa = 7.22 FIPLLYY1808 pKa = 10.62 YY1809 pKa = 10.05 MKK1811 pKa = 10.23 EE1812 pKa = 4.04 LKK1814 pKa = 10.45 QSDD1817 pKa = 4.34 LDD1819 pKa = 3.91 RR1820 pKa = 11.84 FDD1822 pKa = 4.95 ANKK1825 pKa = 9.92 TYY1827 pKa = 11.07 EE1828 pKa = 4.16 KK1829 pKa = 10.83 VSWNNWQVNRR1839 pKa = 11.84 DD1840 pKa = 3.67 MSTGTIDD1847 pKa = 4.26 LTIKK1851 pKa = 10.07 GANRR1855 pKa = 11.84 SIRR1858 pKa = 11.84 ILGEE1862 pKa = 4.01 DD1863 pKa = 3.87 DD1864 pKa = 3.37 QLKK1867 pKa = 9.12 IAEE1870 pKa = 4.19 MQLIEE1875 pKa = 4.4 GDD1877 pKa = 3.63 NTSVEE1882 pKa = 4.04 SHH1884 pKa = 6.36 ARR1886 pKa = 11.84 RR1887 pKa = 11.84 LLNARR1892 pKa = 11.84 HH1893 pKa = 5.76 NLQFEE1898 pKa = 4.18 KK1899 pKa = 10.2 MKK1901 pKa = 10.26 EE1902 pKa = 3.96 YY1903 pKa = 10.3 TYY1905 pKa = 10.79 LEE1907 pKa = 4.0 PGMYY1911 pKa = 9.47 YY1912 pKa = 9.72 ICWQKK1917 pKa = 10.95 KK1918 pKa = 7.89 SKK1920 pKa = 9.32 FTFNYY1925 pKa = 10.06 QMLLCEE1931 pKa = 4.86 IIEE1934 pKa = 4.22 NRR1936 pKa = 11.84 NKK1938 pKa = 10.17 QPATLLASRR1947 pKa = 11.84 INLLHH1952 pKa = 6.09 PVCPAIVSRR1961 pKa = 11.84 IPSPEE1966 pKa = 4.11 KK1967 pKa = 10.47 IRR1969 pKa = 11.84 ITALKK1974 pKa = 10.0 YY1975 pKa = 10.66 LNQEE1979 pKa = 4.34 CEE1981 pKa = 3.97 LSRR1984 pKa = 11.84 LQLLKK1989 pKa = 11.2 NEE1991 pKa = 4.22 FATTRR1996 pKa = 11.84 RR1997 pKa = 11.84 CHH1999 pKa = 5.43 FSKK2002 pKa = 8.15 MTHH2005 pKa = 5.25 FAGVEE2010 pKa = 4.08 FVVGNIDD2017 pKa = 3.31 VNRR2020 pKa = 11.84 LMGTPSLLSVNYY2032 pKa = 9.24 PSLSQTPLITISQIFRR2048 pKa = 11.84 CNGVEE2053 pKa = 4.09 TEE2055 pKa = 3.78 VDD2057 pKa = 3.25 EE2058 pKa = 6.32 FEE2060 pKa = 4.39 FLSDD2064 pKa = 5.13 EE2065 pKa = 4.15 ILEE2068 pKa = 4.74 DD2069 pKa = 3.66 TDD2071 pKa = 3.87 TAPVNAIPFFHH2082 pKa = 6.61 VSYY2085 pKa = 9.31 STKK2088 pKa = 10.31 SKK2090 pKa = 10.56 QGYY2093 pKa = 5.97 TYY2095 pKa = 10.77 KK2096 pKa = 10.38 QALQHH2101 pKa = 6.19 ALRR2104 pKa = 11.84 MGLEE2108 pKa = 3.88 EE2109 pKa = 4.63 MEE2111 pKa = 4.57 NEE2113 pKa = 4.9 FDD2115 pKa = 4.33 FTGQNLGFFSPKK2127 pKa = 10.08 NIGIISFLVGLVNRR2141 pKa = 11.84 LNTNEE2146 pKa = 3.9 WSTVMLKK2153 pKa = 10.2 CIHH2156 pKa = 6.19 MSFFNNHH2163 pKa = 5.52 KK2164 pKa = 10.86 DD2165 pKa = 3.65 RR2166 pKa = 11.84 MFHH2169 pKa = 5.47 MFKK2172 pKa = 10.02 IPKK2175 pKa = 9.64 IFIQDD2180 pKa = 4.12 PIGEE2184 pKa = 4.41 KK2185 pKa = 10.48 INWVKK2190 pKa = 10.85 AKK2192 pKa = 10.33 EE2193 pKa = 3.97 FLNGVMPKK2201 pKa = 10.76 DD2202 pKa = 4.1 EE2203 pKa = 4.27 MNHH2206 pKa = 5.38 WGQMFMHH2213 pKa = 7.22 FKK2215 pKa = 10.29 RR2216 pKa = 11.84 KK2217 pKa = 9.46 CFEE2220 pKa = 5.06 AIDD2223 pKa = 4.9 LEE2225 pKa = 4.44 MKK2227 pKa = 10.14 MEE2229 pKa = 4.52 GSSWGEE2235 pKa = 3.79 MLDD2238 pKa = 3.81 MLDD2241 pKa = 4.15 DD2242 pKa = 4.26 YY2243 pKa = 11.27 KK2244 pKa = 11.52 DD2245 pKa = 3.17 EE2246 pKa = 4.49 GMFSFGG2252 pKa = 4.12
Molecular weight: 262.28 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.059
IPC2_protein 6.084
IPC_protein 6.135
Toseland 6.389
ProMoST 6.532
Dawson 6.453
Bjellqvist 6.465
Wikipedia 6.453
Rodwell 6.44
Grimsley 6.504
Solomon 6.453
Lehninger 6.44
Nozaki 6.737
DTASelect 6.898
Thurlkill 6.912
EMBOSS 6.883
Sillero 6.839
Patrickios 4.279
IPC_peptide 6.465
IPC2_peptide 6.678
IPC2.peptide.svr19 6.707
Protein with the highest isoelectric point:
>tr|A0A142K3K3|A0A142K3K3_9VIRU Nucleocapsid protein OS=Capim virus OX=35312 PE=3 SV=1
MM1 pKa = 7.45 GEE3 pKa = 3.82 VANFEE8 pKa = 4.05 FGEE11 pKa = 4.09 RR12 pKa = 11.84 LIAEE16 pKa = 4.29 GRR18 pKa = 11.84 NPFVPDD24 pKa = 2.9 VAYY27 pKa = 10.5 ARR29 pKa = 11.84 FIRR32 pKa = 11.84 EE33 pKa = 4.4 HH34 pKa = 8.39 APMLTPGNIRR44 pKa = 11.84 IFFLRR49 pKa = 11.84 AYY51 pKa = 9.62 DD52 pKa = 3.82 AKK54 pKa = 10.87 QKK56 pKa = 11.04 LKK58 pKa = 8.61 TTTARR63 pKa = 11.84 TANLKK68 pKa = 10.59 FGTATFTVKK77 pKa = 10.56 NNHH80 pKa = 5.79 NEE82 pKa = 3.64 RR83 pKa = 11.84 NANIEE88 pKa = 4.03 VEE90 pKa = 4.77 AEE92 pKa = 3.82 DD93 pKa = 3.9 LTLHH97 pKa = 7.0 RR98 pKa = 11.84 ISGFLAKK105 pKa = 10.08 FVRR108 pKa = 11.84 EE109 pKa = 4.29 SIVDD113 pKa = 3.55 EE114 pKa = 4.52 TASKK118 pKa = 9.93 MIRR121 pKa = 11.84 DD122 pKa = 4.3 TIVNPIAEE130 pKa = 4.44 SLGITWEE137 pKa = 4.27 NGDD140 pKa = 4.11 DD141 pKa = 3.83 VYY143 pKa = 11.88 LSFFPGAEE151 pKa = 3.86 MFLDD155 pKa = 4.25 TFHH158 pKa = 7.02 MLPLAIGIYY167 pKa = 9.84 RR168 pKa = 11.84 VQQKK172 pKa = 7.52 QMKK175 pKa = 10.28 AEE177 pKa = 3.92 FLKK180 pKa = 10.78 KK181 pKa = 9.7 HH182 pKa = 6.03 LRR184 pKa = 11.84 QQYY187 pKa = 9.9 GGLAASQWMSEE198 pKa = 3.84 RR199 pKa = 11.84 KK200 pKa = 9.6 EE201 pKa = 4.03 DD202 pKa = 3.72 VKK204 pKa = 11.22 LALTLISRR212 pKa = 11.84 LPWGKK217 pKa = 10.53 AGLSAAARR225 pKa = 11.84 NFLADD230 pKa = 4.21 FGITFF235 pKa = 4.61
Molecular weight: 26.61 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.565
IPC2_protein 8.404
IPC_protein 8.448
Toseland 9.224
ProMoST 8.887
Dawson 9.443
Bjellqvist 9.063
Wikipedia 9.589
Rodwell 9.721
Grimsley 9.502
Solomon 9.545
Lehninger 9.516
Nozaki 9.136
DTASelect 9.092
Thurlkill 9.268
EMBOSS 9.604
Sillero 9.341
Patrickios 5.308
IPC_peptide 9.545
IPC2_peptide 7.585
IPC2.peptide.svr19 7.644
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
3917
235
2252
1305.7
150.14
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
4.902 ± 0.927
2.987 ± 1.087
5.31 ± 0.506
6.944 ± 0.341
5.361 ± 0.485
4.391 ± 0.685
2.221 ± 0.013
8.655 ± 0.501
7.812 ± 0.529
9.089 ± 0.291
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.293 ± 0.258
5.974 ± 0.62
3.37 ± 0.034
3.217 ± 0.477
4.442 ± 0.852
7.046 ± 0.42
5.897 ± 0.445
4.366 ± 0.054
0.868 ± 0.19
3.855 ± 0.447
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here