Klebsiella phage 1513

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Webervirus; Klebsiella virus 1513

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 72 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5AN96|A0A0C5AN96_9CAUD Uncharacterized protein OS=Klebsiella phage 1513 OX=1610829 GN=PK_045 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 10.31LYY4 pKa = 10.06PDD6 pKa = 4.02QNDD9 pKa = 3.27PAAPMRR15 pKa = 11.84LGDD18 pKa = 3.8TPIDD22 pKa = 3.8EE23 pKa = 4.66QEE25 pKa = 4.3VIAAIARR32 pKa = 11.84ASDD35 pKa = 3.91DD36 pKa = 3.93EE37 pKa = 4.61NPTALEE43 pKa = 4.32CVTADD48 pKa = 3.91LLLMSFLPEE57 pKa = 3.89SEE59 pKa = 5.54SYY61 pKa = 9.71IQHH64 pKa = 5.29ITEE67 pKa = 4.44TGQAVTKK74 pKa = 10.2PEE76 pKa = 4.41FIGASNVLAMMADD89 pKa = 3.38EE90 pKa = 4.69SDD92 pKa = 4.05NIISLDD98 pKa = 3.69YY99 pKa = 10.39PQQ101 pKa = 5.29

Molecular weight: 11.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5ACP6|A0A0C5ACP6_9CAUD Uncharacterized protein OS=Klebsiella phage 1513 OX=1610829 GN=PK_071 PE=4 SV=1
MM1 pKa = 7.15EE2 pKa = 4.35QMAKK6 pKa = 9.16IDD8 pKa = 3.69KK9 pKa = 8.67RR10 pKa = 11.84TLNGNNGTSRR20 pKa = 11.84GKK22 pKa = 10.13DD23 pKa = 2.76KK24 pKa = 10.96KK25 pKa = 10.14KK26 pKa = 10.08RR27 pKa = 11.84KK28 pKa = 9.64RR29 pKa = 11.84PTGYY33 pKa = 10.29YY34 pKa = 8.98VLKK37 pKa = 10.82DD38 pKa = 3.64EE39 pKa = 4.64VRR41 pKa = 11.84AGLTARR47 pKa = 11.84MEE49 pKa = 4.17LVIDD53 pKa = 4.09AFGGIAGTAKK63 pKa = 10.28EE64 pKa = 4.69LGVSIQVVQQWRR76 pKa = 11.84KK77 pKa = 10.07RR78 pKa = 11.84GMISADD84 pKa = 3.02GAYY87 pKa = 9.93LVHH90 pKa = 7.28KK91 pKa = 9.81SYY93 pKa = 10.98RR94 pKa = 11.84RR95 pKa = 11.84NNCKK99 pKa = 9.96GFRR102 pKa = 11.84ASFCRR107 pKa = 11.84PDD109 pKa = 4.47LRR111 pKa = 11.84FDD113 pKa = 4.29SNGKK117 pKa = 8.82PVTRR121 pKa = 11.84RR122 pKa = 11.84CDD124 pKa = 3.19RR125 pKa = 11.84RR126 pKa = 11.84EE127 pKa = 3.64MLRR130 pKa = 11.84VVRR133 pKa = 5.17

Molecular weight: 15.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

72

0

72

13581

50

989

188.6

21.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.865 ± 0.414

1.451 ± 0.159

6.288 ± 0.23

6.421 ± 0.305

4.219 ± 0.152

7.812 ± 0.229

1.87 ± 0.196

6.222 ± 0.187

6.708 ± 0.317

6.693 ± 0.212

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.137 ± 0.146

4.492 ± 0.2

3.49 ± 0.229

3.696 ± 0.282

5.294 ± 0.254

6.045 ± 0.251

5.287 ± 0.236

7.054 ± 0.345

1.465 ± 0.118

3.49 ± 0.188
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski