Amino acid dipepetide frequency for Wenzhou picorna-like virus 27

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.503AlaAla: 6.503 ± 0.0
0.765AlaCys: 0.765 ± 0.0
2.295AlaAsp: 2.295 ± 0.0
2.295AlaGlu: 2.295 ± 0.0
3.826AlaPhe: 3.826 ± 0.0
6.121AlaGly: 6.121 ± 0.0
1.53AlaHis: 1.53 ± 0.0
2.678AlaIle: 2.678 ± 0.0
5.738AlaLys: 5.738 ± 0.0
5.356AlaLeu: 5.356 ± 0.0
4.973AlaMet: 4.973 ± 0.0
2.678AlaAsn: 2.678 ± 0.0
3.443AlaPro: 3.443 ± 0.0
6.886AlaGln: 6.886 ± 0.0
3.443AlaArg: 3.443 ± 0.0
6.886AlaSer: 6.886 ± 0.0
4.208AlaThr: 4.208 ± 0.0
5.738AlaVal: 5.738 ± 0.0
1.53AlaTrp: 1.53 ± 0.0
0.765AlaTyr: 0.765 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
2.295CysAla: 2.295 ± 0.0
0.765CysCys: 0.765 ± 0.0
2.295CysAsp: 2.295 ± 0.0
1.148CysGlu: 1.148 ± 0.0
0.383CysPhe: 0.383 ± 0.0
1.913CysGly: 1.913 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.383CysIle: 0.383 ± 0.0
0.765CysLys: 0.765 ± 0.0
0.383CysLeu: 0.383 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.383CysAsn: 0.383 ± 0.0
1.148CysPro: 1.148 ± 0.0
0.383CysGln: 0.383 ± 0.0
1.148CysArg: 1.148 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.765CysThr: 0.765 ± 0.0
1.148CysVal: 1.148 ± 0.0
0.383CysTrp: 0.383 ± 0.0
0.765CysTyr: 0.765 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.678AspAla: 2.678 ± 0.0
0.765AspCys: 0.765 ± 0.0
2.678AspAsp: 2.678 ± 0.0
5.356AspGlu: 5.356 ± 0.0
0.765AspPhe: 0.765 ± 0.0
5.356AspGly: 5.356 ± 0.0
2.295AspHis: 2.295 ± 0.0
2.678AspIle: 2.678 ± 0.0
3.06AspLys: 3.06 ± 0.0
4.591AspLeu: 4.591 ± 0.0
2.295AspMet: 2.295 ± 0.0
3.443AspAsn: 3.443 ± 0.0
3.06AspPro: 3.06 ± 0.0
1.913AspGln: 1.913 ± 0.0
0.383AspArg: 0.383 ± 0.0
4.591AspSer: 4.591 ± 0.0
4.208AspThr: 4.208 ± 0.0
4.208AspVal: 4.208 ± 0.0
1.148AspTrp: 1.148 ± 0.0
0.0AspTyr: 0.0 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
6.503GluAla: 6.503 ± 0.0
1.148GluCys: 1.148 ± 0.0
2.295GluAsp: 2.295 ± 0.0
5.356GluGlu: 5.356 ± 0.0
2.295GluPhe: 2.295 ± 0.0
4.591GluGly: 4.591 ± 0.0
0.765GluHis: 0.765 ± 0.0
3.06GluIle: 3.06 ± 0.0
2.295GluLys: 2.295 ± 0.0
5.356GluLeu: 5.356 ± 0.0
2.295GluMet: 2.295 ± 0.0
3.443GluAsn: 3.443 ± 0.0
1.53GluPro: 1.53 ± 0.0
2.295GluGln: 2.295 ± 0.0
1.913GluArg: 1.913 ± 0.0
4.208GluSer: 4.208 ± 0.0
3.826GluThr: 3.826 ± 0.0
4.591GluVal: 4.591 ± 0.0
1.913GluTrp: 1.913 ± 0.0
0.765GluTyr: 0.765 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.678PheAla: 2.678 ± 0.0
0.0PheCys: 0.0 ± 0.0
2.678PheAsp: 2.678 ± 0.0
3.06PheGlu: 3.06 ± 0.0
0.765PhePhe: 0.765 ± 0.0
3.06PheGly: 3.06 ± 0.0
1.53PheHis: 1.53 ± 0.0
1.53PheIle: 1.53 ± 0.0
0.0PheLys: 0.0 ± 0.0
4.591PheLeu: 4.591 ± 0.0
0.383PheMet: 0.383 ± 0.0
2.295PheAsn: 2.295 ± 0.0
2.295PhePro: 2.295 ± 0.0
3.443PheGln: 3.443 ± 0.0
3.06PheArg: 3.06 ± 0.0
2.295PheSer: 2.295 ± 0.0
1.53PheThr: 1.53 ± 0.0
1.53PheVal: 1.53 ± 0.0
1.53PheTrp: 1.53 ± 0.0
0.383PheTyr: 0.383 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.678GlyAla: 2.678 ± 0.0
0.383GlyCys: 0.383 ± 0.0
5.356GlyAsp: 5.356 ± 0.0
3.443GlyGlu: 3.443 ± 0.0
1.148GlyPhe: 1.148 ± 0.0
3.826GlyGly: 3.826 ± 0.0
1.913GlyHis: 1.913 ± 0.0
3.06GlyIle: 3.06 ± 0.0
6.121GlyLys: 6.121 ± 0.0
6.886GlyLeu: 6.886 ± 0.0
1.913GlyMet: 1.913 ± 0.0
2.678GlyAsn: 2.678 ± 0.0
3.826GlyPro: 3.826 ± 0.0
3.06GlyGln: 3.06 ± 0.0
3.443GlyArg: 3.443 ± 0.0
5.738GlySer: 5.738 ± 0.0
2.678GlyThr: 2.678 ± 0.0
6.503GlyVal: 6.503 ± 0.0
2.295GlyTrp: 2.295 ± 0.0
1.53GlyTyr: 1.53 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
3.06HisAla: 3.06 ± 0.0
0.383HisCys: 0.383 ± 0.0
0.383HisAsp: 0.383 ± 0.0
0.765HisGlu: 0.765 ± 0.0
1.53HisPhe: 1.53 ± 0.0
1.53HisGly: 1.53 ± 0.0
0.383HisHis: 0.383 ± 0.0
2.295HisIle: 2.295 ± 0.0
1.53HisLys: 1.53 ± 0.0
0.383HisLeu: 0.383 ± 0.0
0.765HisMet: 0.765 ± 0.0
0.0HisAsn: 0.0 ± 0.0
0.383HisPro: 0.383 ± 0.0
1.913HisGln: 1.913 ± 0.0
1.53HisArg: 1.53 ± 0.0
1.913HisSer: 1.913 ± 0.0
0.765HisThr: 0.765 ± 0.0
2.295HisVal: 2.295 ± 0.0
1.148HisTrp: 1.148 ± 0.0
0.765HisTyr: 0.765 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
5.356IleAla: 5.356 ± 0.0
1.148IleCys: 1.148 ± 0.0
4.591IleAsp: 4.591 ± 0.0
3.443IleGlu: 3.443 ± 0.0
1.913IlePhe: 1.913 ± 0.0
3.826IleGly: 3.826 ± 0.0
0.765IleHis: 0.765 ± 0.0
1.913IleIle: 1.913 ± 0.0
4.208IleLys: 4.208 ± 0.0
4.208IleLeu: 4.208 ± 0.0
1.53IleMet: 1.53 ± 0.0
1.53IleAsn: 1.53 ± 0.0
1.913IlePro: 1.913 ± 0.0
1.913IleGln: 1.913 ± 0.0
1.53IleArg: 1.53 ± 0.0
4.973IleSer: 4.973 ± 0.0
3.443IleThr: 3.443 ± 0.0
1.913IleVal: 1.913 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.53IleTyr: 1.53 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.678LysAla: 2.678 ± 0.0
0.765LysCys: 0.765 ± 0.0
4.208LysAsp: 4.208 ± 0.0
2.295LysGlu: 2.295 ± 0.0
1.53LysPhe: 1.53 ± 0.0
2.295LysGly: 2.295 ± 0.0
1.148LysHis: 1.148 ± 0.0
3.826LysIle: 3.826 ± 0.0
2.678LysLys: 2.678 ± 0.0
3.826LysLeu: 3.826 ± 0.0
3.06LysMet: 3.06 ± 0.0
1.53LysAsn: 1.53 ± 0.0
1.913LysPro: 1.913 ± 0.0
0.765LysGln: 0.765 ± 0.0
4.591LysArg: 4.591 ± 0.0
3.826LysSer: 3.826 ± 0.0
5.738LysThr: 5.738 ± 0.0
3.826LysVal: 3.826 ± 0.0
0.765LysTrp: 0.765 ± 0.0
2.295LysTyr: 2.295 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.503LeuAla: 6.503 ± 0.0
0.383LeuCys: 0.383 ± 0.0
4.591LeuAsp: 4.591 ± 0.0
6.121LeuGlu: 6.121 ± 0.0
1.148LeuPhe: 1.148 ± 0.0
4.973LeuGly: 4.973 ± 0.0
3.06LeuHis: 3.06 ± 0.0
2.678LeuIle: 2.678 ± 0.0
4.208LeuLys: 4.208 ± 0.0
6.121LeuLeu: 6.121 ± 0.0
2.295LeuMet: 2.295 ± 0.0
3.826LeuAsn: 3.826 ± 0.0
3.443LeuPro: 3.443 ± 0.0
3.06LeuGln: 3.06 ± 0.0
6.121LeuArg: 6.121 ± 0.0
5.356LeuSer: 5.356 ± 0.0
5.738LeuThr: 5.738 ± 0.0
6.886LeuVal: 6.886 ± 0.0
1.913LeuTrp: 1.913 ± 0.0
2.295LeuTyr: 2.295 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.826MetAla: 3.826 ± 0.0
1.53MetCys: 1.53 ± 0.0
2.678MetAsp: 2.678 ± 0.0
1.913MetGlu: 1.913 ± 0.0
0.765MetPhe: 0.765 ± 0.0
1.53MetGly: 1.53 ± 0.0
0.383MetHis: 0.383 ± 0.0
1.53MetIle: 1.53 ± 0.0
1.53MetLys: 1.53 ± 0.0
2.678MetLeu: 2.678 ± 0.0
1.913MetMet: 1.913 ± 0.0
1.53MetAsn: 1.53 ± 0.0
0.765MetPro: 0.765 ± 0.0
0.765MetGln: 0.765 ± 0.0
1.148MetArg: 1.148 ± 0.0
1.913MetSer: 1.913 ± 0.0
1.53MetThr: 1.53 ± 0.0
2.295MetVal: 2.295 ± 0.0
1.148MetTrp: 1.148 ± 0.0
0.765MetTyr: 0.765 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.06AsnAla: 3.06 ± 0.0
1.148AsnCys: 1.148 ± 0.0
0.383AsnAsp: 0.383 ± 0.0
3.443AsnGlu: 3.443 ± 0.0
2.678AsnPhe: 2.678 ± 0.0
1.53AsnGly: 1.53 ± 0.0
1.148AsnHis: 1.148 ± 0.0
3.06AsnIle: 3.06 ± 0.0
1.148AsnLys: 1.148 ± 0.0
2.678AsnLeu: 2.678 ± 0.0
1.148AsnMet: 1.148 ± 0.0
3.443AsnAsn: 3.443 ± 0.0
4.208AsnPro: 4.208 ± 0.0
1.53AsnGln: 1.53 ± 0.0
2.678AsnArg: 2.678 ± 0.0
3.443AsnSer: 3.443 ± 0.0
3.06AsnThr: 3.06 ± 0.0
3.443AsnVal: 3.443 ± 0.0
1.148AsnTrp: 1.148 ± 0.0
1.913AsnTyr: 1.913 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.208ProAla: 4.208 ± 0.0
0.765ProCys: 0.765 ± 0.0
2.678ProAsp: 2.678 ± 0.0
3.06ProGlu: 3.06 ± 0.0
1.148ProPhe: 1.148 ± 0.0
1.148ProGly: 1.148 ± 0.0
0.765ProHis: 0.765 ± 0.0
3.06ProIle: 3.06 ± 0.0
2.295ProLys: 2.295 ± 0.0
5.738ProLeu: 5.738 ± 0.0
2.678ProMet: 2.678 ± 0.0
3.443ProAsn: 3.443 ± 0.0
1.148ProPro: 1.148 ± 0.0
1.913ProGln: 1.913 ± 0.0
0.765ProArg: 0.765 ± 0.0
3.826ProSer: 3.826 ± 0.0
2.678ProThr: 2.678 ± 0.0
3.826ProVal: 3.826 ± 0.0
1.53ProTrp: 1.53 ± 0.0
3.443ProTyr: 3.443 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
4.208GlnAla: 4.208 ± 0.0
0.383GlnCys: 0.383 ± 0.0
2.295GlnAsp: 2.295 ± 0.0
2.295GlnGlu: 2.295 ± 0.0
2.678GlnPhe: 2.678 ± 0.0
3.826GlnGly: 3.826 ± 0.0
0.765GlnHis: 0.765 ± 0.0
3.06GlnIle: 3.06 ± 0.0
2.295GlnLys: 2.295 ± 0.0
4.208GlnLeu: 4.208 ± 0.0
1.913GlnMet: 1.913 ± 0.0
1.148GlnAsn: 1.148 ± 0.0
3.06GlnPro: 3.06 ± 0.0
2.295GlnGln: 2.295 ± 0.0
1.148GlnArg: 1.148 ± 0.0
1.913GlnSer: 1.913 ± 0.0
1.53GlnThr: 1.53 ± 0.0
3.826GlnVal: 3.826 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.973ArgAla: 4.973 ± 0.0
0.383ArgCys: 0.383 ± 0.0
3.443ArgAsp: 3.443 ± 0.0
1.148ArgGlu: 1.148 ± 0.0
2.295ArgPhe: 2.295 ± 0.0
3.443ArgGly: 3.443 ± 0.0
0.383ArgHis: 0.383 ± 0.0
2.678ArgIle: 2.678 ± 0.0
2.678ArgLys: 2.678 ± 0.0
4.208ArgLeu: 4.208 ± 0.0
0.383ArgMet: 0.383 ± 0.0
3.06ArgAsn: 3.06 ± 0.0
1.148ArgPro: 1.148 ± 0.0
1.53ArgGln: 1.53 ± 0.0
4.208ArgArg: 4.208 ± 0.0
1.53ArgSer: 1.53 ± 0.0
3.443ArgThr: 3.443 ± 0.0
5.738ArgVal: 5.738 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
1.148ArgTyr: 1.148 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.208SerAla: 4.208 ± 0.0
1.913SerCys: 1.913 ± 0.0
4.208SerAsp: 4.208 ± 0.0
3.443SerGlu: 3.443 ± 0.0
3.06SerPhe: 3.06 ± 0.0
6.886SerGly: 6.886 ± 0.0
1.148SerHis: 1.148 ± 0.0
3.443SerIle: 3.443 ± 0.0
3.826SerLys: 3.826 ± 0.0
8.034SerLeu: 8.034 ± 0.0
1.148SerMet: 1.148 ± 0.0
2.678SerAsn: 2.678 ± 0.0
4.973SerPro: 4.973 ± 0.0
3.06SerGln: 3.06 ± 0.0
1.53SerArg: 1.53 ± 0.0
6.503SerSer: 6.503 ± 0.0
4.591SerThr: 4.591 ± 0.0
4.591SerVal: 4.591 ± 0.0
1.53SerTrp: 1.53 ± 0.0
1.913SerTyr: 1.913 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.443ThrAla: 3.443 ± 0.0
1.913ThrCys: 1.913 ± 0.0
2.678ThrAsp: 2.678 ± 0.0
3.826ThrGlu: 3.826 ± 0.0
3.443ThrPhe: 3.443 ± 0.0
6.121ThrGly: 6.121 ± 0.0
1.53ThrHis: 1.53 ± 0.0
3.06ThrIle: 3.06 ± 0.0
3.06ThrLys: 3.06 ± 0.0
4.973ThrLeu: 4.973 ± 0.0
0.383ThrMet: 0.383 ± 0.0
3.443ThrAsn: 3.443 ± 0.0
3.826ThrPro: 3.826 ± 0.0
2.295ThrGln: 2.295 ± 0.0
1.913ThrArg: 1.913 ± 0.0
4.591ThrSer: 4.591 ± 0.0
3.826ThrThr: 3.826 ± 0.0
4.208ThrVal: 4.208 ± 0.0
0.765ThrTrp: 0.765 ± 0.0
1.913ThrTyr: 1.913 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.121ValAla: 6.121 ± 0.0
0.765ValCys: 0.765 ± 0.0
4.208ValAsp: 4.208 ± 0.0
6.121ValGlu: 6.121 ± 0.0
5.356ValPhe: 5.356 ± 0.0
3.826ValGly: 3.826 ± 0.0
1.53ValHis: 1.53 ± 0.0
5.356ValIle: 5.356 ± 0.0
2.678ValLys: 2.678 ± 0.0
4.208ValLeu: 4.208 ± 0.0
0.765ValMet: 0.765 ± 0.0
3.443ValAsn: 3.443 ± 0.0
6.121ValPro: 6.121 ± 0.0
2.678ValGln: 2.678 ± 0.0
3.06ValArg: 3.06 ± 0.0
4.973ValSer: 4.973 ± 0.0
3.826ValThr: 3.826 ± 0.0
6.503ValVal: 6.503 ± 0.0
0.383ValTrp: 0.383 ± 0.0
2.295ValTyr: 2.295 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.383TrpAla: 0.383 ± 0.0
0.765TrpCys: 0.765 ± 0.0
0.765TrpAsp: 0.765 ± 0.0
0.765TrpGlu: 0.765 ± 0.0
0.383TrpPhe: 0.383 ± 0.0
0.383TrpGly: 0.383 ± 0.0
0.383TrpHis: 0.383 ± 0.0
1.913TrpIle: 1.913 ± 0.0
1.913TrpLys: 1.913 ± 0.0
1.148TrpLeu: 1.148 ± 0.0
0.765TrpMet: 0.765 ± 0.0
1.148TrpAsn: 1.148 ± 0.0
0.383TrpPro: 0.383 ± 0.0
0.765TrpGln: 0.765 ± 0.0
1.53TrpArg: 1.53 ± 0.0
2.295TrpSer: 2.295 ± 0.0
2.295TrpThr: 2.295 ± 0.0
0.765TrpVal: 0.765 ± 0.0
0.383TrpTrp: 0.383 ± 0.0
0.765TrpTyr: 0.765 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.678TyrAla: 2.678 ± 0.0
0.383TyrCys: 0.383 ± 0.0
0.765TyrAsp: 0.765 ± 0.0
1.148TyrGlu: 1.148 ± 0.0
1.53TyrPhe: 1.53 ± 0.0
2.295TyrGly: 2.295 ± 0.0
2.295TyrHis: 2.295 ± 0.0
0.383TyrIle: 0.383 ± 0.0
1.53TyrLys: 1.53 ± 0.0
1.148TyrLeu: 1.148 ± 0.0
1.148TyrMet: 1.148 ± 0.0
1.148TyrAsn: 1.148 ± 0.0
1.53TyrPro: 1.53 ± 0.0
0.383TyrGln: 0.383 ± 0.0
2.678TyrArg: 2.678 ± 0.0
1.913TyrSer: 1.913 ± 0.0
1.53TyrThr: 1.53 ± 0.0
0.383TyrVal: 0.383 ± 0.0
0.383TyrTrp: 0.383 ± 0.0
0.765TyrTyr: 0.765 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2615 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski