Adoxophyes orana granulovirus (AoGV)

Taxonomy: Viruses; Naldaviricetes; Lefavirales; Baculoviridae; Betabaculovirus

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 119 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q7T9Y1|Q7T9Y1_GVAO ADOR34 OS=Adoxophyes orana granulovirus OX=170617 GN=ORF_34 PE=4 SV=1
MM1 pKa = 7.72IPVLDD6 pKa = 4.3FNYY9 pKa = 10.08VPADD13 pKa = 4.4DD14 pKa = 5.85IMDD17 pKa = 3.92ISNNTVSGDD26 pKa = 3.55NEE28 pKa = 4.36INLEE32 pKa = 4.18DD33 pKa = 4.83ADD35 pKa = 3.71IQKK38 pKa = 10.88FIDD41 pKa = 3.08QTRR44 pKa = 11.84NVNSYY49 pKa = 9.83CANSKK54 pKa = 10.2HH55 pKa = 6.11FNLFVDD61 pKa = 6.62FILNDD66 pKa = 3.73NITYY70 pKa = 10.86SNFFII75 pKa = 5.63

Molecular weight: 8.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q7T9U9|Q7T9U9_GVAO ORF_66 OS=Adoxophyes orana granulovirus OX=170617 GN=ORF_66 PE=4 SV=1
MM1 pKa = 7.41VYY3 pKa = 10.06RR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84PGRR9 pKa = 11.84PRR11 pKa = 11.84SRR13 pKa = 11.84SRR15 pKa = 11.84SRR17 pKa = 11.84SRR19 pKa = 11.84SRR21 pKa = 11.84SRR23 pKa = 11.84SRR25 pKa = 11.84SYY27 pKa = 11.14SRR29 pKa = 11.84QQTHH33 pKa = 5.05ARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84SRR39 pKa = 11.84SRR41 pKa = 11.84SPYY44 pKa = 8.71RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84SRR49 pKa = 11.84HH50 pKa = 4.39INQYY54 pKa = 8.27VV55 pKa = 2.79

Molecular weight: 6.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

118

1

119

30941

48

1138

260.0

30.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.652 ± 0.12

2.611 ± 0.154

6.477 ± 0.223

5.553 ± 0.256

4.667 ± 0.169

3.022 ± 0.187

2.098 ± 0.081

7.889 ± 0.143

7.734 ± 0.319

9.476 ± 0.203

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.553 ± 0.113

9.45 ± 0.18

3.032 ± 0.234

3.436 ± 0.157

3.949 ± 0.164

6.183 ± 0.154

5.543 ± 0.213

6.593 ± 0.193

0.84 ± 0.066

5.242 ± 0.151
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski