Jeotgalibaca sp. PTS2502

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Jeotgalibaca; unclassified Jeotgalibaca

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2116 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1U7EES4|A0A1U7EES4_9LACT Ion-translocating oxidoreductase complex subunit C OS=Jeotgalibaca sp. PTS2502 OX=1903686 GN=rnfC PE=3 SV=1
MM1 pKa = 7.46LVLLLIFFMTLGSVGTVALANYY23 pKa = 8.37TNVLVEE29 pKa = 3.88ASVVNVRR36 pKa = 11.84LGPGLSYY43 pKa = 11.05DD44 pKa = 4.59IMTQVQGGSSVNVLSEE60 pKa = 3.85RR61 pKa = 11.84NEE63 pKa = 4.02WYY65 pKa = 10.1KK66 pKa = 10.94VRR68 pKa = 11.84LDD70 pKa = 3.77DD71 pKa = 6.27GRR73 pKa = 11.84IGWIASWLIDD83 pKa = 3.64NTEE86 pKa = 3.91VAASQNLMATVAASSVNVRR105 pKa = 11.84EE106 pKa = 4.36EE107 pKa = 4.15NNSDD111 pKa = 3.58SEE113 pKa = 4.67IIGTASSGEE122 pKa = 4.1QFNLLYY128 pKa = 10.57EE129 pKa = 4.33EE130 pKa = 5.07NGWSQIAFNNRR141 pKa = 11.84VGWILSEE148 pKa = 4.46LVDD151 pKa = 3.62ITPGTIEE158 pKa = 3.74IEE160 pKa = 4.48EE161 pKa = 4.52IVTEE165 pKa = 4.55TPSEE169 pKa = 4.41TTDD172 pKa = 3.17STVTITSEE180 pKa = 4.04RR181 pKa = 11.84VNLRR185 pKa = 11.84IGPSLNDD192 pKa = 3.4DD193 pKa = 3.84VVYY196 pKa = 9.08TASQGEE202 pKa = 4.63SFTFSRR208 pKa = 11.84SVGDD212 pKa = 3.63FYY214 pKa = 11.37EE215 pKa = 5.54IILTDD220 pKa = 3.97GSQAYY225 pKa = 8.17VANWLVDD232 pKa = 3.87LSGEE236 pKa = 4.22SSQAEE241 pKa = 4.04APVITTTLSEE251 pKa = 4.1ATIVIDD257 pKa = 4.27PGHH260 pKa = 6.57GGSDD264 pKa = 3.33PGALGSYY271 pKa = 9.96VYY273 pKa = 10.46EE274 pKa = 5.08KK275 pKa = 10.9DD276 pKa = 3.39VTMSTAEE283 pKa = 3.77QLAEE287 pKa = 4.0KK288 pKa = 10.67LEE290 pKa = 4.27AVGANVILTRR300 pKa = 11.84TTDD303 pKa = 3.09ASVSLDD309 pKa = 3.25EE310 pKa = 5.16RR311 pKa = 11.84VWISNSYY318 pKa = 10.19RR319 pKa = 11.84ADD321 pKa = 3.54LFISLHH327 pKa = 5.86YY328 pKa = 10.75DD329 pKa = 3.19STPEE333 pKa = 3.84GMSASGFTTYY343 pKa = 10.93YY344 pKa = 10.6YY345 pKa = 11.06DD346 pKa = 3.47NTDD349 pKa = 3.0SYY351 pKa = 11.76LADD354 pKa = 3.69LVNSKK359 pKa = 9.98LAQNLPLPNNGVAFGDD375 pKa = 3.73YY376 pKa = 10.73LVLRR380 pKa = 11.84EE381 pKa = 4.11NTQPALLLEE390 pKa = 4.75LGYY393 pKa = 10.41MNNDD397 pKa = 2.24SDD399 pKa = 5.54AAVFDD404 pKa = 3.89NNYY407 pKa = 9.95YY408 pKa = 10.22RR409 pKa = 11.84DD410 pKa = 3.84LVSTSILQALTEE422 pKa = 4.22YY423 pKa = 10.55FQQ425 pKa = 5.29

Molecular weight: 46.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1U7EDA8|A0A1U7EDA8_9LACT Uncharacterized protein OS=Jeotgalibaca sp. PTS2502 OX=1903686 GN=BW721_08190 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.6RR3 pKa = 11.84TFQPKK8 pKa = 8.32KK9 pKa = 9.49RR10 pKa = 11.84KK11 pKa = 8.83RR12 pKa = 11.84QTVHH16 pKa = 6.23GFRR19 pKa = 11.84KK20 pKa = 10.06RR21 pKa = 11.84MSTKK25 pKa = 10.02NGRR28 pKa = 11.84NVLASRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.73GRR39 pKa = 11.84KK40 pKa = 8.76VLSAA44 pKa = 4.05

Molecular weight: 5.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2116

0

2116

637522

29

2446

301.3

33.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.192 ± 0.059

0.559 ± 0.013

5.886 ± 0.045

7.519 ± 0.066

4.435 ± 0.045

6.364 ± 0.052

2.015 ± 0.025

7.744 ± 0.045

6.35 ± 0.051

9.739 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.751 ± 0.024

4.57 ± 0.035

3.261 ± 0.028

4.119 ± 0.043

4.104 ± 0.039

6.173 ± 0.043

5.664 ± 0.034

6.903 ± 0.041

0.85 ± 0.017

3.804 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski