Dracaena mottle virus
Average proteome isoelectric point is 8.11
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q1KLD4|Q1KLD4_9VIRU Uncharacterized protein OS=Dracaena mottle virus OX=380669 PE=4 SV=1
MM1 pKa = 7.55 ASYY4 pKa = 10.37 RR5 pKa = 11.84 RR6 pKa = 11.84 PAVHH10 pKa = 6.49 NNEE13 pKa = 4.47 ASTSTVPNQEE23 pKa = 3.88 DD24 pKa = 3.39 QIRR27 pKa = 11.84 DD28 pKa = 3.35 YY29 pKa = 10.89 RR30 pKa = 11.84 ANARR34 pKa = 11.84 LRR36 pKa = 11.84 HH37 pKa = 5.55 DD38 pKa = 4.06 AQRR41 pKa = 11.84 QLQRR45 pKa = 11.84 VRR47 pKa = 11.84 RR48 pKa = 11.84 TLTGRR53 pKa = 11.84 QGYY56 pKa = 9.37 RR57 pKa = 11.84 RR58 pKa = 11.84 TLEE61 pKa = 3.62 QHH63 pKa = 6.5 IDD65 pKa = 3.58 PNEE68 pKa = 3.78 QLQLSQKK75 pKa = 9.48 KK76 pKa = 9.33 KK77 pKa = 9.55 AAIVPAEE84 pKa = 3.96 VLYY87 pKa = 11.04 DD88 pKa = 4.31 DD89 pKa = 5.03 GWHH92 pKa = 5.36 STVHH96 pKa = 6.38 KK97 pKa = 10.52 VYY99 pKa = 10.58 QHH101 pKa = 6.21 YY102 pKa = 10.56 DD103 pKa = 3.33 EE104 pKa = 4.79 QRR106 pKa = 11.84 VLVLEE111 pKa = 4.59 GQQVEE116 pKa = 4.37 LPFINEE122 pKa = 3.35 QSYY125 pKa = 9.88 RR126 pKa = 11.84 QLLSSGFQHH135 pKa = 6.09 IHH137 pKa = 6.17 VGMVLVRR144 pKa = 11.84 VHH146 pKa = 6.79 ALHH149 pKa = 6.45 SRR151 pKa = 11.84 HH152 pKa = 6.38 AGTMALLCLRR162 pKa = 11.84 DD163 pKa = 3.99 TRR165 pKa = 11.84 WKK167 pKa = 9.89 SSRR170 pKa = 11.84 GIIGSMEE177 pKa = 3.88 VDD179 pKa = 4.03 LTAGSQLVYY188 pKa = 10.26 VVPDD192 pKa = 3.36 ILLSVQDD199 pKa = 4.6 FYY201 pKa = 12.32 NHH203 pKa = 6.38 IEE205 pKa = 4.33 VVVMTHH211 pKa = 7.13 GYY213 pKa = 9.21 QDD215 pKa = 3.35 WVDD218 pKa = 3.79 GEE220 pKa = 4.72 SNLLITKK227 pKa = 10.18 ALVGRR232 pKa = 11.84 LTNTSYY238 pKa = 11.73 AHH240 pKa = 6.29 FKK242 pKa = 10.84 YY243 pKa = 10.31 NVEE246 pKa = 4.03 GVADD250 pKa = 3.81 YY251 pKa = 10.48 LASNGIVALAGQRR264 pKa = 11.84 HH265 pKa = 5.39 TTTEE269 pKa = 4.02 LQGLDD274 pKa = 3.17 WNLKK278 pKa = 8.65 PKK280 pKa = 10.59 QSTAPVQPQEE290 pKa = 3.74 VTYY293 pKa = 11.11 NNRR296 pKa = 11.84 LDD298 pKa = 3.77 GSVTLRR304 pKa = 11.84 FTGYY308 pKa = 10.54 AATRR312 pKa = 11.84 RR313 pKa = 11.84 PTLVEE318 pKa = 4.03 VNEE321 pKa = 4.65 DD322 pKa = 3.74 DD323 pKa = 4.85 LEE325 pKa = 4.41 EE326 pKa = 4.08 FAGMVNFYY334 pKa = 10.96 DD335 pKa = 4.18 DD336 pKa = 4.98 SSPLLCTEE344 pKa = 3.9 ILEE347 pKa = 4.64 EE348 pKa = 5.18 EE349 pKa = 4.44 DD350 pKa = 6.53 DD351 pKa = 3.78 EE352 pKa = 5.24 DD353 pKa = 3.64 LWVPVPPTCRR363 pKa = 11.84 ASPYY367 pKa = 10.5 SDD369 pKa = 3.76 AEE371 pKa = 4.24 EE372 pKa = 4.6 EE373 pKa = 4.07 FLQNLFSAGFTPATEE388 pKa = 4.31 EE389 pKa = 3.56 QDD391 pKa = 3.0 MEE393 pKa = 4.73 YY394 pKa = 9.93 PVSIPIPLSPIYY406 pKa = 9.21 DD407 pKa = 4.22 TYY409 pKa = 11.36 PEE411 pKa = 4.61 DD412 pKa = 4.66 VVHH415 pKa = 6.75 TDD417 pKa = 2.96 HH418 pKa = 7.4 GVLLSDD424 pKa = 3.81 HH425 pKa = 6.26 EE426 pKa = 4.73 VWVPPSHH433 pKa = 6.65 PAEE436 pKa = 4.73 AGGEE440 pKa = 4.12 PCPSTFCEE448 pKa = 3.73 YY449 pKa = 10.94 DD450 pKa = 3.72 SNIEE454 pKa = 4.0 EE455 pKa = 4.05 QFLYY459 pKa = 10.76 DD460 pKa = 5.97 LEE462 pKa = 4.37 CLYY465 pKa = 10.9 NAEE468 pKa = 4.12 QSDD471 pKa = 4.1 LASEE475 pKa = 4.39 EE476 pKa = 4.16 EE477 pKa = 4.25 PATVAVGDD485 pKa = 4.26 DD486 pKa = 3.78 ACVLSPSQSEE496 pKa = 4.46 SKK498 pKa = 10.37 SGRR501 pKa = 11.84 EE502 pKa = 3.66 LVFMEE507 pKa = 5.46 LEE509 pKa = 4.15 ALPYY513 pKa = 7.4 PTLARR518 pKa = 11.84 MEE520 pKa = 4.4 KK521 pKa = 9.26 EE522 pKa = 4.1 SARR525 pKa = 11.84 SSVTSPYY532 pKa = 10.1 TPPTDD537 pKa = 3.44 SGMAPPGYY545 pKa = 9.37 PPASAGGAASSSQMPILGAPFTAADD570 pKa = 3.39 VRR572 pKa = 11.84 ANLKK576 pKa = 9.52 NLRR579 pKa = 11.84 GSRR582 pKa = 11.84 SNAGMFQLPSAQQLRR597 pKa = 11.84 GALLVLPEE605 pKa = 5.74 DD606 pKa = 3.09 IGLYY610 pKa = 9.89 QDD612 pKa = 4.5 VISRR616 pKa = 11.84 WEE618 pKa = 4.17 TITLNVLADD627 pKa = 3.96 KK628 pKa = 10.94 VFSDD632 pKa = 3.65 NRR634 pKa = 11.84 SKK636 pKa = 11.36 LMYY639 pKa = 10.26 VEE641 pKa = 4.44 NLLGEE646 pKa = 4.49 DD647 pKa = 4.16 EE648 pKa = 4.28 KK649 pKa = 11.33 KK650 pKa = 10.85 AWIQWRR656 pKa = 11.84 MAFEE660 pKa = 3.94 QEE662 pKa = 4.33 YY663 pKa = 10.4 EE664 pKa = 4.24 SLIAVADD671 pKa = 4.17 DD672 pKa = 3.6 SQAIISQVRR681 pKa = 11.84 RR682 pKa = 11.84 IITLEE687 pKa = 4.28 DD688 pKa = 3.67 PSQGSTEE695 pKa = 4.19 EE696 pKa = 3.62 QDD698 pKa = 3.13 RR699 pKa = 11.84 AYY701 pKa = 10.25 MDD703 pKa = 4.55 LGRR706 pKa = 11.84 LSCTNMKK713 pKa = 10.58 DD714 pKa = 3.64 LLDD717 pKa = 3.71 YY718 pKa = 10.97 MNDD721 pKa = 3.58 YY722 pKa = 8.37 KK723 pKa = 10.95 TLAAKK728 pKa = 9.9 SGRR731 pKa = 11.84 MYY733 pKa = 11.13 VNHH736 pKa = 6.57 EE737 pKa = 4.16 LSDD740 pKa = 3.61 KK741 pKa = 10.87 FFDD744 pKa = 5.12 KK745 pKa = 10.33 MPQIIGPDD753 pKa = 3.25 MKK755 pKa = 10.73 KK756 pKa = 10.48 AFSEE760 pKa = 4.57 KK761 pKa = 10.71 YY762 pKa = 9.1 PGAQMGVLPRR772 pKa = 11.84 ITFAYY777 pKa = 9.46 KK778 pKa = 10.29 YY779 pKa = 10.59 LSDD782 pKa = 3.43 ICKK785 pKa = 9.74 QAAVQKK791 pKa = 10.15 GVKK794 pKa = 9.96 DD795 pKa = 3.31 LAFCRR800 pKa = 11.84 RR801 pKa = 11.84 IPLPGYY807 pKa = 10.43 YY808 pKa = 9.53 KK809 pKa = 10.68 DD810 pKa = 3.94 GPKK813 pKa = 10.32 KK814 pKa = 10.61 KK815 pKa = 10.5 LGLRR819 pKa = 11.84 KK820 pKa = 9.74 AKK822 pKa = 10.19 NYY824 pKa = 9.75 RR825 pKa = 11.84 GKK827 pKa = 9.65 PHH829 pKa = 6.81 DD830 pKa = 3.35 THH832 pKa = 7.84 VRR834 pKa = 11.84 LVKK837 pKa = 10.88 NKK839 pKa = 10.62 DD840 pKa = 2.81 KK841 pKa = 11.28 GRR843 pKa = 11.84 TTKK846 pKa = 10.08 CRR848 pKa = 11.84 CYY850 pKa = 9.7 ICGQEE855 pKa = 3.67 GHH857 pKa = 6.44 FARR860 pKa = 11.84 EE861 pKa = 4.12 CRR863 pKa = 11.84 NGRR866 pKa = 11.84 GNIARR871 pKa = 11.84 AAIIKK876 pKa = 10.46 DD877 pKa = 3.52 LDD879 pKa = 3.83 LPSDD883 pKa = 4.19 FDD885 pKa = 4.24 VLSVDD890 pKa = 4.19 NNDD893 pKa = 3.63 PMSDD897 pKa = 4.17 AICSFSEE904 pKa = 4.63 GEE906 pKa = 4.1 AGGSQTIKK914 pKa = 9.83 TALSDD919 pKa = 3.83 LPFLEE924 pKa = 4.87 GSFMLKK930 pKa = 8.67 EE931 pKa = 4.31 TVSWRR936 pKa = 11.84 PTVSLPANQANCQHH950 pKa = 6.13 LWEE953 pKa = 5.93 DD954 pKa = 3.71 NSQSTGHH961 pKa = 5.96 SWCTYY966 pKa = 8.81 CKK968 pKa = 10.59 APTSVLYY975 pKa = 8.6 RR976 pKa = 11.84 TKK978 pKa = 10.4 CTLCLLLCCPYY989 pKa = 10.38 CALHH993 pKa = 5.41 FHH995 pKa = 5.15 QHH997 pKa = 4.82 RR998 pKa = 11.84 VRR1000 pKa = 11.84 KK1001 pKa = 8.89 EE1002 pKa = 3.88 RR1003 pKa = 11.84 PPVEE1007 pKa = 4.68 APEE1010 pKa = 3.96 QLIQNLIGYY1019 pKa = 9.17 IDD1021 pKa = 4.03 SLLKK1025 pKa = 10.56 EE1026 pKa = 4.04 NEE1028 pKa = 3.98 RR1029 pKa = 11.84 LKK1031 pKa = 10.95 EE1032 pKa = 4.0 EE1033 pKa = 5.17 RR1034 pKa = 11.84 DD1035 pKa = 3.64 DD1036 pKa = 4.53 LQQKK1040 pKa = 7.5 LQRR1043 pKa = 11.84 TEE1045 pKa = 4.07 EE1046 pKa = 4.14 RR1047 pKa = 11.84 LQSLLGDD1054 pKa = 3.99 YY1055 pKa = 10.55 LHH1057 pKa = 6.92 EE1058 pKa = 4.83 ASEE1061 pKa = 4.29 DD1062 pKa = 3.41 MAAEE1066 pKa = 4.01 AEE1068 pKa = 4.08 RR1069 pKa = 11.84 RR1070 pKa = 11.84 RR1071 pKa = 11.84 KK1072 pKa = 9.87 GKK1074 pKa = 10.18 ALATSVPRR1082 pKa = 11.84 ATTGGPVIRR1091 pKa = 11.84 EE1092 pKa = 3.95 PLEE1095 pKa = 4.32 GCVEE1099 pKa = 4.1 EE1100 pKa = 5.95 CSDD1103 pKa = 4.32 EE1104 pKa = 4.22 DD1105 pKa = 4.17 TEE1107 pKa = 4.34 EE1108 pKa = 4.06 AAALLAEE1115 pKa = 4.39 AAKK1118 pKa = 10.24 IGQQHH1123 pKa = 5.06 QKK1125 pKa = 11.09 KK1126 pKa = 10.33 LINRR1130 pKa = 11.84 LYY1132 pKa = 8.31 NTVVKK1137 pKa = 8.33 FTIPGAEE1144 pKa = 4.1 PFEE1147 pKa = 5.71 AIAIFDD1153 pKa = 3.91 TGATSCVLDD1162 pKa = 3.78 SKK1164 pKa = 10.82 IVPEE1168 pKa = 4.22 KK1169 pKa = 10.88 ALTALTYY1176 pKa = 10.19 NVQFSGVNSLDD1187 pKa = 3.45 TSRR1190 pKa = 11.84 QRR1192 pKa = 11.84 LKK1194 pKa = 10.4 EE1195 pKa = 3.68 GRR1197 pKa = 11.84 MTIGDD1202 pKa = 3.96 HH1203 pKa = 7.11 DD1204 pKa = 4.31 FPIPLVYY1211 pKa = 10.39 CFPLDD1216 pKa = 3.52 SSRR1219 pKa = 11.84 DD1220 pKa = 3.69 GVQMLIGCNFIRR1232 pKa = 11.84 SKK1234 pKa = 10.58 QGGVRR1239 pKa = 11.84 FEE1241 pKa = 4.24 GTTVTFYY1248 pKa = 11.15 KK1249 pKa = 10.59 QLTTVQTEE1257 pKa = 3.84 IEE1259 pKa = 4.55 AIKK1262 pKa = 10.33 SAQFDD1267 pKa = 3.9 EE1268 pKa = 5.04 PEE1270 pKa = 3.89 EE1271 pKa = 3.95 LMEE1274 pKa = 4.82 IICPQWHH1281 pKa = 6.76 IEE1283 pKa = 4.19 HH1284 pKa = 6.8 PTDD1287 pKa = 4.92 AIGVGLRR1294 pKa = 11.84 AQKK1297 pKa = 9.98 IVQRR1301 pKa = 11.84 LLQQNISDD1309 pKa = 4.55 DD1310 pKa = 4.03 PLKK1313 pKa = 10.6 FWAKK1317 pKa = 10.81 NKK1319 pKa = 7.32 VTCQLEE1325 pKa = 4.55 IINPDD1330 pKa = 3.4 LTIQDD1335 pKa = 4.13 KK1336 pKa = 9.88 PLKK1339 pKa = 10.27 HH1340 pKa = 5.43 VTPLMEE1346 pKa = 4.16 QQFKK1350 pKa = 10.7 RR1351 pKa = 11.84 HH1352 pKa = 5.38 VEE1354 pKa = 3.6 ALLQLKK1360 pKa = 8.9 VIRR1363 pKa = 11.84 PSKK1366 pKa = 9.57 SRR1368 pKa = 11.84 HH1369 pKa = 4.12 RR1370 pKa = 11.84 TMAMIGNSGTSVDD1383 pKa = 3.63 PTTGKK1388 pKa = 9.56 EE1389 pKa = 4.19 VKK1391 pKa = 10.1 GKK1393 pKa = 10.1 EE1394 pKa = 3.6 RR1395 pKa = 11.84 MVFNYY1400 pKa = 10.21 RR1401 pKa = 11.84 SLNDD1405 pKa = 3.48 NTHH1408 pKa = 6.55 KK1409 pKa = 10.74 DD1410 pKa = 3.55 QYY1412 pKa = 10.72 SLPGINTIIQKK1423 pKa = 10.02 IGRR1426 pKa = 11.84 ATVYY1430 pKa = 10.9 SKK1432 pKa = 11.29 FDD1434 pKa = 3.82 LKK1436 pKa = 11.28 SGFHH1440 pKa = 5.2 QVAMSPEE1447 pKa = 4.47 SIEE1450 pKa = 3.59 WTAFIVLGGLYY1461 pKa = 9.21 EE1462 pKa = 4.13 WLVMPFGLKK1471 pKa = 9.49 NAPAVFQRR1479 pKa = 11.84 KK1480 pKa = 7.88 MDD1482 pKa = 3.4 HH1483 pKa = 6.42 CFAGTEE1489 pKa = 4.07 KK1490 pKa = 10.7 FIAVYY1495 pKa = 10.16 IDD1497 pKa = 4.99 DD1498 pKa = 4.3 ILIFSANDD1506 pKa = 3.39 EE1507 pKa = 4.28 EE1508 pKa = 5.02 HH1509 pKa = 6.69 VEE1511 pKa = 4.03 HH1512 pKa = 6.92 LKK1514 pKa = 10.57 VFCAIVEE1521 pKa = 4.11 KK1522 pKa = 10.76 HH1523 pKa = 5.88 GLILSSNKK1531 pKa = 8.24 MQLGKK1536 pKa = 10.47 RR1537 pKa = 11.84 EE1538 pKa = 3.97 IDD1540 pKa = 3.46 FLGATLGNRR1549 pKa = 11.84 KK1550 pKa = 8.93 IKK1552 pKa = 10.43 LQAHH1556 pKa = 7.16 IIKK1559 pKa = 10.18 KK1560 pKa = 9.46 IAAFPEE1566 pKa = 4.01 AQLAEE1571 pKa = 4.39 KK1572 pKa = 10.35 KK1573 pKa = 10.63 GLRR1576 pKa = 11.84 SWLGILNYY1584 pKa = 9.85 ARR1586 pKa = 11.84 SYY1588 pKa = 10.48 IPRR1591 pKa = 11.84 LGILLGPLYY1600 pKa = 10.59 QKK1602 pKa = 9.43 TSPHH1606 pKa = 5.79 GDD1608 pKa = 2.91 KK1609 pKa = 10.73 RR1610 pKa = 11.84 MKK1612 pKa = 9.42 PHH1614 pKa = 6.81 DD1615 pKa = 4.2 WEE1617 pKa = 4.26 LVAQIKK1623 pKa = 10.46 QMVQSLPDD1631 pKa = 3.61 LEE1633 pKa = 5.19 VPPKK1637 pKa = 10.81 DD1638 pKa = 3.41 SFIVLEE1644 pKa = 4.41 TDD1646 pKa = 2.9 GCMEE1650 pKa = 4.32 GWGGICKK1657 pKa = 9.86 WKK1659 pKa = 9.82 QAKK1662 pKa = 9.53 KK1663 pKa = 10.5 DD1664 pKa = 3.48 PRR1666 pKa = 11.84 GKK1668 pKa = 10.49 EE1669 pKa = 3.52 KK1670 pKa = 10.63 VAAYY1674 pKa = 10.26 ASGRR1678 pKa = 11.84 FPVPKK1683 pKa = 9.52 STIDD1687 pKa = 3.39 AEE1689 pKa = 4.58 IYY1691 pKa = 10.71 ACTEE1695 pKa = 3.78 TLSALKK1701 pKa = 9.98 IHH1703 pKa = 6.01 YY1704 pKa = 9.68 LDD1706 pKa = 3.54 RR1707 pKa = 11.84 KK1708 pKa = 9.98 EE1709 pKa = 4.23 IILRR1713 pKa = 11.84 TDD1715 pKa = 3.26 CQAIISFYY1723 pKa = 11.17 NKK1725 pKa = 10.23 SSVNKK1730 pKa = 8.56 PSRR1733 pKa = 11.84 VRR1735 pKa = 11.84 WLAFTDD1741 pKa = 5.29 FITGLGIDD1749 pKa = 3.7 VQFEE1753 pKa = 4.52 HH1754 pKa = 7.24 IKK1756 pKa = 11.05 GEE1758 pKa = 4.26 QNVLADD1764 pKa = 3.7 TLSRR1768 pKa = 11.84 LTFVLLQVPDD1778 pKa = 4.42 PFSPPITEE1786 pKa = 4.38 LCQALKK1792 pKa = 10.29 EE1793 pKa = 4.11 IQATSTTPVGVWNRR1807 pKa = 11.84 FQTQICKK1814 pKa = 9.53 TYY1816 pKa = 11.32 ASMASSRR1823 pKa = 11.84 SSPTLDD1829 pKa = 4.46 DD1830 pKa = 5.82 DD1831 pKa = 4.87 LWCQEE1836 pKa = 4.01 QSKK1839 pKa = 10.1 KK1840 pKa = 11.0 APLSTHH1846 pKa = 5.88 CRR1848 pKa = 11.84 GTGEE1852 pKa = 4.49 HH1853 pKa = 5.9 STSLRR1858 pKa = 11.84 PTNGEE1863 pKa = 3.61 PCGPSSALQSSSRR1876 pKa = 11.84 NSRR1879 pKa = 11.84 WRR1881 pKa = 11.84 HH1882 pKa = 3.38 VTGSEE1887 pKa = 3.66 RR1888 pKa = 11.84 VIMHH1892 pKa = 7.21 GATHH1896 pKa = 7.13 TPTCGTSMNSSYY1908 pKa = 11.72 ASLDD1912 pKa = 3.42 NSKK1915 pKa = 10.82 SS1916 pKa = 3.39
Molecular weight: 215.02 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.744
IPC2_protein 5.715
IPC_protein 5.779
Toseland 6.122
ProMoST 6.122
Dawson 6.033
Bjellqvist 6.059
Wikipedia 6.033
Rodwell 6.02
Grimsley 6.249
Solomon 6.033
Lehninger 6.02
Nozaki 6.3
DTASelect 6.478
Thurlkill 6.491
EMBOSS 6.453
Sillero 6.402
Patrickios 4.126
IPC_peptide 6.046
IPC2_peptide 6.376
IPC2.peptide.svr19 6.345
Protein with the highest isoelectric point:
>tr|Q1KLD2|Q1KLD2_9VIRU Uncharacterized protein OS=Dracaena mottle virus OX=380669 PE=4 SV=1
MM1 pKa = 7.56 SFPGGKK7 pKa = 9.07 PSPSMSWQIRR17 pKa = 11.84 SSLTTAPNSCMWRR30 pKa = 11.84 TYY32 pKa = 10.0 LEE34 pKa = 3.79 KK35 pKa = 9.88 MRR37 pKa = 11.84 RR38 pKa = 11.84 KK39 pKa = 10.03 LGSNGGWHH47 pKa = 6.4 SSKK50 pKa = 11.22 SMRR53 pKa = 11.84 ASLQWRR59 pKa = 11.84 MIHH62 pKa = 5.92 KK63 pKa = 10.11 QSSPKK68 pKa = 10.28 CEE70 pKa = 3.64 EE71 pKa = 3.9 SSPLKK76 pKa = 10.22 IQARR80 pKa = 11.84 GQQKK84 pKa = 10.62 NKK86 pKa = 9.86 TEE88 pKa = 4.13 PTWTSEE94 pKa = 3.49 GSAAQTT100 pKa = 3.55
Molecular weight: 11.27 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.275
IPC2_protein 9.663
IPC_protein 9.926
Toseland 10.877
ProMoST 10.394
Dawson 10.935
Bjellqvist 10.555
Wikipedia 11.067
Rodwell 11.403
Grimsley 10.95
Solomon 11.023
Lehninger 11.008
Nozaki 10.862
DTASelect 10.54
Thurlkill 10.847
EMBOSS 11.257
Sillero 10.862
Patrickios 11.155
IPC_peptide 11.038
IPC2_peptide 9.37
IPC2.peptide.svr19 8.672
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
7
0
7
2638
100
1916
376.9
42.55
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.975 ± 0.505
1.895 ± 0.424
5.08 ± 1.061
6.823 ± 0.771
3.222 ± 0.698
5.193 ± 1.101
2.616 ± 0.266
5.231 ± 0.392
5.8 ± 0.862
10.008 ± 1.103
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.388 ± 0.57
3.374 ± 0.316
5.61 ± 0.531
5.231 ± 0.632
6.634 ± 1.625
8.074 ± 1.252
6.065 ± 0.46
5.61 ± 0.624
1.251 ± 0.277
2.919 ± 0.508
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here