Amino acid dipepetide frequency for Fusarium poae dsRNA virus 3

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
11.173AlaAla: 11.173 ± 0.989
0.0AlaCys: 0.0 ± 0.0
4.842AlaAsp: 4.842 ± 1.356
3.724AlaGlu: 3.724 ± 1.084
1.862AlaPhe: 1.862 ± 0.277
3.352AlaGly: 3.352 ± 0.286
2.235AlaHis: 2.235 ± 0.544
3.724AlaIle: 3.724 ± 0.506
2.98AlaLys: 2.98 ± 0.019
11.918AlaLeu: 11.918 ± 1.514
0.0AlaMet: 0.0 ± 0.0
4.097AlaAsn: 4.097 ± 0.821
7.449AlaPro: 7.449 ± 3.758
4.469AlaGln: 4.469 ± 2.679
7.821AlaArg: 7.821 ± 0.845
7.076AlaSer: 7.076 ± 0.84
5.214AlaThr: 5.214 ± 0.033
7.076AlaVal: 7.076 ± 2.34
1.49AlaTrp: 1.49 ± 0.009
4.469AlaTyr: 4.469 ± 1.032
0.0AlaXaa: 0.0 ± 0.0
Cys
1.49CysAla: 1.49 ± 0.521
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.745CysPhe: 0.745 ± 0.535
1.117CysGly: 1.117 ± 0.258
0.372CysHis: 0.372 ± 0.267
0.372CysIle: 0.372 ± 0.267
0.0CysLys: 0.0 ± 0.0
0.745CysLeu: 0.745 ± 0.005
0.372CysMet: 0.372 ± 0.263
0.0CysAsn: 0.0 ± 0.0
0.745CysPro: 0.745 ± 0.005
0.0CysGln: 0.0 ± 0.0
0.0CysArg: 0.0 ± 0.0
0.372CysSer: 0.372 ± 0.267
0.0CysThr: 0.0 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.587AspAla: 5.587 ± 0.76
0.745AspCys: 0.745 ± 0.535
1.862AspAsp: 1.862 ± 0.277
1.117AspGlu: 1.117 ± 0.788
2.98AspPhe: 2.98 ± 0.549
2.607AspGly: 2.607 ± 0.282
1.862AspHis: 1.862 ± 0.783
2.235AspIle: 2.235 ± 0.014
0.372AspLys: 0.372 ± 0.263
3.352AspLeu: 3.352 ± 0.774
0.372AspMet: 0.372 ± 0.186
1.862AspAsn: 1.862 ± 0.783
2.607AspPro: 2.607 ± 1.839
1.117AspGln: 1.117 ± 0.272
4.469AspArg: 4.469 ± 1.619
4.097AspSer: 4.097 ± 0.821
2.98AspThr: 2.98 ± 0.511
2.98AspVal: 2.98 ± 1.079
0.745AspTrp: 0.745 ± 0.525
2.607AspTyr: 2.607 ± 0.248
0.0AspXaa: 0.0 ± 0.0
Glu
4.469GluAla: 4.469 ± 0.558
0.0GluCys: 0.0 ± 0.0
1.117GluAsp: 1.117 ± 0.272
1.49GluGlu: 1.49 ± 0.009
2.607GluPhe: 2.607 ± 0.248
4.097GluGly: 4.097 ± 0.769
0.372GluHis: 0.372 ± 0.267
0.0GluIle: 0.0 ± 0.0
1.862GluLys: 1.862 ± 0.253
7.449GluLeu: 7.449 ± 0.047
0.745GluMet: 0.745 ± 0.005
0.745GluAsn: 0.745 ± 0.535
1.117GluPro: 1.117 ± 0.272
2.235GluGln: 2.235 ± 1.074
3.352GluArg: 3.352 ± 1.304
3.724GluSer: 3.724 ± 1.036
2.235GluThr: 2.235 ± 1.046
2.98GluVal: 2.98 ± 1.079
0.0GluTrp: 0.0 ± 0.0
1.862GluTyr: 1.862 ± 0.277
0.0GluXaa: 0.0 ± 0.0
Phe
4.097PheAla: 4.097 ± 1.881
0.372PheCys: 0.372 ± 0.267
2.98PheAsp: 2.98 ± 0.511
2.607PheGlu: 2.607 ± 0.248
2.98PhePhe: 2.98 ± 0.019
2.607PheGly: 2.607 ± 0.282
0.372PheHis: 0.372 ± 0.263
1.49PheIle: 1.49 ± 0.54
0.745PheLys: 0.745 ± 0.525
2.607PheLeu: 2.607 ± 0.248
1.117PheMet: 1.117 ± 0.788
2.607PheAsn: 2.607 ± 0.248
3.352PhePro: 3.352 ± 0.816
1.117PheGln: 1.117 ± 0.272
0.745PheArg: 0.745 ± 0.535
5.214PheSer: 5.214 ± 1.093
1.49PheThr: 1.49 ± 0.521
1.862PheVal: 1.862 ± 0.783
0.745PheTrp: 0.745 ± 0.005
0.372PheTyr: 0.372 ± 0.263
0.0PheXaa: 0.0 ± 0.0
Gly
6.331GlyAla: 6.331 ± 0.755
0.745GlyCys: 0.745 ± 0.525
1.862GlyAsp: 1.862 ± 1.313
2.235GlyGlu: 2.235 ± 1.576
3.352GlyPhe: 3.352 ± 0.774
3.352GlyGly: 3.352 ± 0.244
2.235GlyHis: 2.235 ± 0.014
2.235GlyIle: 2.235 ± 1.576
2.98GlyLys: 2.98 ± 1.571
5.959GlyLeu: 5.959 ± 0.568
1.117GlyMet: 1.117 ± 0.272
3.724GlyAsn: 3.724 ± 0.506
1.862GlyPro: 1.862 ± 0.807
2.235GlyGln: 2.235 ± 0.516
3.724GlyArg: 3.724 ± 0.554
3.724GlySer: 3.724 ± 0.554
4.097GlyThr: 4.097 ± 0.821
3.724GlyVal: 3.724 ± 0.506
0.0GlyTrp: 0.0 ± 0.0
2.235GlyTyr: 2.235 ± 0.516
0.0GlyXaa: 0.0 ± 0.0
His
1.117HisAla: 1.117 ± 0.272
0.372HisCys: 0.372 ± 0.263
2.235HisAsp: 2.235 ± 0.014
0.745HisGlu: 0.745 ± 0.005
1.117HisPhe: 1.117 ± 0.258
2.607HisGly: 2.607 ± 0.778
0.745HisHis: 0.745 ± 0.005
0.745HisIle: 0.745 ± 0.535
1.117HisLys: 1.117 ± 0.272
1.49HisLeu: 1.49 ± 0.521
0.0HisMet: 0.0 ± 0.0
1.117HisAsn: 1.117 ± 0.272
2.607HisPro: 2.607 ± 0.282
1.49HisGln: 1.49 ± 0.54
1.117HisArg: 1.117 ± 0.272
3.724HisSer: 3.724 ± 0.024
1.117HisThr: 1.117 ± 0.788
2.235HisVal: 2.235 ± 0.014
0.372HisTrp: 0.372 ± 0.263
1.862HisTyr: 1.862 ± 0.277
0.0HisXaa: 0.0 ± 0.0
Ile
1.862IleAla: 1.862 ± 0.807
0.372IleCys: 0.372 ± 0.263
2.98IleAsp: 2.98 ± 0.511
1.49IleGlu: 1.49 ± 0.54
0.372IlePhe: 0.372 ± 0.263
1.862IleGly: 1.862 ± 0.253
2.98IleHis: 2.98 ± 1.571
0.372IleIle: 0.372 ± 0.267
1.862IleLys: 1.862 ± 0.783
6.331IleLeu: 6.331 ± 0.225
1.117IleMet: 1.117 ± 0.788
2.235IleAsn: 2.235 ± 0.544
4.469IlePro: 4.469 ± 1.032
0.745IleGln: 0.745 ± 0.005
3.352IleArg: 3.352 ± 1.304
4.842IleSer: 4.842 ± 0.234
2.235IleThr: 2.235 ± 0.516
1.862IleVal: 1.862 ± 0.783
0.0IleTrp: 0.0 ± 0.0
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.98LysAla: 2.98 ± 1.571
0.0LysCys: 0.0 ± 0.0
0.0LysAsp: 0.0 ± 0.0
1.862LysGlu: 1.862 ± 0.253
0.745LysPhe: 0.745 ± 0.005
1.862LysGly: 1.862 ± 0.277
1.49LysHis: 1.49 ± 0.521
1.862LysIle: 1.862 ± 1.313
0.372LysLys: 0.372 ± 0.263
5.214LysLeu: 5.214 ± 2.087
0.0LysMet: 0.0 ± 0.0
1.862LysAsn: 1.862 ± 0.783
2.607LysPro: 2.607 ± 0.282
0.745LysGln: 0.745 ± 0.005
2.235LysArg: 2.235 ± 0.516
0.745LysSer: 0.745 ± 0.525
2.607LysThr: 2.607 ± 0.248
4.097LysVal: 4.097 ± 1.829
0.372LysTrp: 0.372 ± 0.267
1.117LysTyr: 1.117 ± 0.258
0.0LysXaa: 0.0 ± 0.0
Leu
13.035LeuAla: 13.035 ± 1.408
1.117LeuCys: 1.117 ± 0.788
5.214LeuAsp: 5.214 ± 1.557
4.097LeuGlu: 4.097 ± 1.829
3.724LeuPhe: 3.724 ± 0.024
4.842LeuGly: 4.842 ± 1.824
2.235LeuHis: 2.235 ± 1.046
5.587LeuIle: 5.587 ± 2.35
4.097LeuLys: 4.097 ± 1.299
11.546LeuLeu: 11.546 ± 3.372
2.98LeuMet: 2.98 ± 0.019
4.842LeuAsn: 4.842 ± 0.826
8.939LeuPro: 8.939 ± 0.587
4.842LeuGln: 4.842 ± 0.826
8.194LeuArg: 8.194 ± 0.478
8.566LeuSer: 8.566 ± 0.32
8.566LeuThr: 8.566 ± 2.331
4.097LeuVal: 4.097 ± 0.769
1.117LeuTrp: 1.117 ± 0.802
3.724LeuTyr: 3.724 ± 0.024
0.0LeuXaa: 0.0 ± 0.0
Met
2.235MetAla: 2.235 ± 0.014
0.0MetCys: 0.0 ± 0.0
0.372MetAsp: 0.372 ± 0.267
0.745MetGlu: 0.745 ± 0.005
0.372MetPhe: 0.372 ± 0.263
0.372MetGly: 0.372 ± 0.263
0.745MetHis: 0.745 ± 0.005
0.372MetIle: 0.372 ± 0.267
1.117MetLys: 1.117 ± 0.258
2.607MetLeu: 2.607 ± 0.282
0.0MetMet: 0.0 ± 0.0
0.372MetAsn: 0.372 ± 0.267
0.372MetPro: 0.372 ± 0.267
0.372MetGln: 0.372 ± 0.267
2.235MetArg: 2.235 ± 0.516
1.117MetSer: 1.117 ± 0.272
1.117MetThr: 1.117 ± 0.788
0.745MetVal: 0.745 ± 0.535
0.372MetTrp: 0.372 ± 0.263
0.372MetTyr: 0.372 ± 0.267
0.0MetXaa: 0.0 ± 0.0
Asn
4.842AsnAla: 4.842 ± 0.296
0.0AsnCys: 0.0 ± 0.0
3.352AsnAsp: 3.352 ± 0.244
1.49AsnGlu: 1.49 ± 0.54
1.862AsnPhe: 1.862 ± 0.253
1.117AsnGly: 1.117 ± 0.272
1.49AsnHis: 1.49 ± 0.009
1.862AsnIle: 1.862 ± 0.253
0.745AsnLys: 0.745 ± 0.005
5.587AsnLeu: 5.587 ± 1.29
1.862AsnMet: 1.862 ± 0.192
1.862AsnAsn: 1.862 ± 0.807
2.607AsnPro: 2.607 ± 0.812
1.862AsnGln: 1.862 ± 0.807
3.352AsnArg: 3.352 ± 0.286
2.607AsnSer: 2.607 ± 1.309
4.097AsnThr: 4.097 ± 0.291
4.469AsnVal: 4.469 ± 1.089
1.117AsnTrp: 1.117 ± 0.802
1.862AsnTyr: 1.862 ± 0.807
0.0AsnXaa: 0.0 ± 0.0
Pro
5.214ProAla: 5.214 ± 1.093
0.372ProCys: 0.372 ± 0.267
2.607ProAsp: 2.607 ± 0.812
3.724ProGlu: 3.724 ± 1.084
2.235ProPhe: 2.235 ± 1.074
5.587ProGly: 5.587 ± 1.29
0.372ProHis: 0.372 ± 0.263
4.842ProIle: 4.842 ± 0.234
1.49ProLys: 1.49 ± 0.009
5.587ProLeu: 5.587 ± 0.301
1.117ProMet: 1.117 ± 0.802
5.214ProAsn: 5.214 ± 0.033
6.331ProPro: 6.331 ± 0.305
4.097ProGln: 4.097 ± 0.291
3.352ProArg: 3.352 ± 1.346
6.331ProSer: 6.331 ± 0.225
5.214ProThr: 5.214 ± 1.623
2.607ProVal: 2.607 ± 1.342
0.0ProTrp: 0.0 ± 0.0
3.352ProTyr: 3.352 ± 0.286
0.0ProXaa: 0.0 ± 0.0
Gln
4.469GlnAla: 4.469 ± 2.679
0.0GlnCys: 0.0 ± 0.0
2.235GlnAsp: 2.235 ± 0.516
2.235GlnGlu: 2.235 ± 0.014
1.49GlnPhe: 1.49 ± 0.54
2.607GlnGly: 2.607 ± 0.282
0.372GlnHis: 0.372 ± 0.267
1.49GlnIle: 1.49 ± 1.07
1.862GlnLys: 1.862 ± 0.277
5.587GlnLeu: 5.587 ± 0.831
0.372GlnMet: 0.372 ± 0.267
2.607GlnAsn: 2.607 ± 1.342
1.862GlnPro: 1.862 ± 0.277
0.745GlnGln: 0.745 ± 0.535
2.235GlnArg: 2.235 ± 1.074
1.117GlnSer: 1.117 ± 0.258
2.98GlnThr: 2.98 ± 1.079
1.862GlnVal: 1.862 ± 0.277
0.372GlnTrp: 0.372 ± 0.263
1.49GlnTyr: 1.49 ± 0.521
0.0GlnXaa: 0.0 ± 0.0
Arg
7.076ArgAla: 7.076 ± 0.75
0.372ArgCys: 0.372 ± 0.267
3.352ArgAsp: 3.352 ± 0.774
2.98ArgGlu: 2.98 ± 0.549
1.117ArgPhe: 1.117 ± 0.272
3.724ArgGly: 3.724 ± 1.566
1.862ArgHis: 1.862 ± 1.337
4.469ArgIle: 4.469 ± 0.502
2.235ArgLys: 2.235 ± 1.576
5.959ArgLeu: 5.959 ± 0.568
0.372ArgMet: 0.372 ± 0.263
2.607ArgAsn: 2.607 ± 1.342
4.097ArgPro: 4.097 ± 0.239
2.98ArgGln: 2.98 ± 1.079
4.097ArgArg: 4.097 ± 0.291
7.449ArgSer: 7.449 ± 0.577
2.607ArgThr: 2.607 ± 0.282
4.842ArgVal: 4.842 ± 1.886
1.862ArgTrp: 1.862 ± 1.337
2.235ArgTyr: 2.235 ± 0.544
0.0ArgXaa: 0.0 ± 0.0
Ser
4.842SerAla: 4.842 ± 1.356
1.117SerCys: 1.117 ± 0.272
3.352SerAsp: 3.352 ± 0.286
2.98SerGlu: 2.98 ± 0.549
5.214SerPhe: 5.214 ± 1.093
7.076SerGly: 7.076 ± 1.28
2.98SerHis: 2.98 ± 1.079
3.352SerIle: 3.352 ± 0.774
1.862SerLys: 1.862 ± 0.253
9.311SerLeu: 9.311 ± 0.736
1.49SerMet: 1.49 ± 0.54
3.352SerAsn: 3.352 ± 0.774
5.587SerPro: 5.587 ± 1.891
1.49SerGln: 1.49 ± 1.07
3.352SerArg: 3.352 ± 0.286
9.683SerSer: 9.683 ± 0.468
5.587SerThr: 5.587 ± 0.301
4.469SerVal: 4.469 ± 0.502
1.862SerTrp: 1.862 ± 0.277
5.587SerTyr: 5.587 ± 1.29
0.0SerXaa: 0.0 ± 0.0
Thr
4.842ThrAla: 4.842 ± 0.826
0.745ThrCys: 0.745 ± 0.535
2.98ThrAsp: 2.98 ± 0.019
1.49ThrGlu: 1.49 ± 0.009
1.862ThrPhe: 1.862 ± 0.783
4.097ThrGly: 4.097 ± 0.239
2.235ThrHis: 2.235 ± 0.014
2.235ThrIle: 2.235 ± 1.046
1.49ThrLys: 1.49 ± 0.009
9.683ThrLeu: 9.683 ± 2.589
0.745ThrMet: 0.745 ± 0.525
2.607ThrAsn: 2.607 ± 0.248
4.842ThrPro: 4.842 ± 1.356
2.607ThrGln: 2.607 ± 0.248
4.097ThrArg: 4.097 ± 0.821
4.469ThrSer: 4.469 ± 1.089
3.352ThrThr: 3.352 ± 0.244
4.097ThrVal: 4.097 ± 0.291
1.117ThrTrp: 1.117 ± 0.788
2.607ThrTyr: 2.607 ± 0.812
0.0ThrXaa: 0.0 ± 0.0
Val
3.352ValAla: 3.352 ± 0.816
0.0ValCys: 0.0 ± 0.0
2.98ValAsp: 2.98 ± 0.549
2.607ValGlu: 2.607 ± 0.248
1.49ValPhe: 1.49 ± 0.521
2.98ValGly: 2.98 ± 0.549
1.49ValHis: 1.49 ± 0.521
2.607ValIle: 2.607 ± 1.309
3.724ValLys: 3.724 ± 1.566
5.214ValLeu: 5.214 ± 1.557
0.745ValMet: 0.745 ± 0.005
5.214ValAsn: 5.214 ± 0.563
4.842ValPro: 4.842 ± 0.826
2.98ValGln: 2.98 ± 0.019
5.214ValArg: 5.214 ± 0.033
4.842ValSer: 4.842 ± 0.296
3.352ValThr: 3.352 ± 0.816
5.587ValVal: 5.587 ± 0.831
1.117ValTrp: 1.117 ± 0.802
1.49ValTyr: 1.49 ± 0.521
0.0ValXaa: 0.0 ± 0.0
Trp
0.745TrpAla: 0.745 ± 0.005
0.0TrpCys: 0.0 ± 0.0
0.372TrpAsp: 0.372 ± 0.263
1.49TrpGlu: 1.49 ± 0.54
0.745TrpPhe: 0.745 ± 0.535
0.0TrpGly: 0.0 ± 0.0
0.372TrpHis: 0.372 ± 0.267
0.0TrpIle: 0.0 ± 0.0
0.372TrpLys: 0.372 ± 0.263
1.117TrpLeu: 1.117 ± 0.272
1.117TrpMet: 1.117 ± 0.802
0.372TrpAsn: 0.372 ± 0.267
0.372TrpPro: 0.372 ± 0.267
0.372TrpGln: 0.372 ± 0.263
1.117TrpArg: 1.117 ± 0.272
2.235TrpSer: 2.235 ± 0.544
0.745TrpThr: 0.745 ± 0.005
0.372TrpVal: 0.372 ± 0.263
0.745TrpTrp: 0.745 ± 0.535
0.745TrpTyr: 0.745 ± 0.525
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.214TyrAla: 5.214 ± 0.497
0.0TyrCys: 0.0 ± 0.0
2.235TyrAsp: 2.235 ± 0.014
3.352TyrGlu: 3.352 ± 0.244
2.607TyrPhe: 2.607 ± 0.248
1.862TyrGly: 1.862 ± 0.253
1.117TyrHis: 1.117 ± 0.802
1.49TyrIle: 1.49 ± 0.54
1.49TyrLys: 1.49 ± 1.051
4.097TyrLeu: 4.097 ± 0.769
0.0TyrMet: 0.0 ± 0.0
0.745TyrAsn: 0.745 ± 0.525
2.98TyrPro: 2.98 ± 1.041
1.49TyrGln: 1.49 ± 0.54
2.235TyrArg: 2.235 ± 0.544
2.607TyrSer: 2.607 ± 0.282
2.607TyrThr: 2.607 ± 0.812
1.862TyrVal: 1.862 ± 0.783
0.0TyrTrp: 0.0 ± 0.0
1.117TyrTyr: 1.117 ± 0.272
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2686 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski