Clohesyomyces aquaticus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Pleosporales; Lindgomycetaceae; Clohesyomyces

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 15806 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y1Y6W5|A0A1Y1Y6W5_9PLEO Uncharacterized protein OS=Clohesyomyces aquaticus OX=1231657 GN=BCR34DRAFT_235437 PE=4 SV=1
MM1 pKa = 6.66GTALASPASHH11 pKa = 7.19LYY13 pKa = 8.79SAKK16 pKa = 10.32RR17 pKa = 11.84QTATPDD23 pKa = 2.75IAGAITQWNLDD34 pKa = 3.68VQTVNTFLNHH44 pKa = 7.79AIGQSQMDD52 pKa = 4.19LLIAARR58 pKa = 11.84NALNFASDD66 pKa = 3.86EE67 pKa = 4.32PNEE70 pKa = 3.91LMILAMSQGLADD82 pKa = 3.83NALAAIQDD90 pKa = 3.76LMNVFGNVPTAIQSVIDD107 pKa = 4.34NPDD110 pKa = 3.31AGNVATQVGVINQVRR125 pKa = 11.84CCNVLPDD132 pKa = 5.65LNVLWTAAAADD143 pKa = 4.01AGVVGQVNLVVPLPNACNDD162 pKa = 3.39GSVVCPP168 pKa = 4.04

Molecular weight: 17.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y1ZIN8|A0A1Y1ZIN8_9PLEO RTA1 like protein-domain-containing protein OS=Clohesyomyces aquaticus OX=1231657 GN=BCR34DRAFT_540564 PE=4 SV=1
MM1 pKa = 7.1FPSMGPLLAKK11 pKa = 10.0FLRR14 pKa = 11.84PPVLGLLLTHH24 pKa = 7.12KK25 pKa = 10.18LLPLSLPPTPRR36 pKa = 11.84PRR38 pKa = 11.84RR39 pKa = 11.84NTRR42 pKa = 11.84RR43 pKa = 11.84QLHH46 pKa = 5.68NPHH49 pKa = 6.15VLSIQLQQITNLSPSPSSRR68 pKa = 11.84STTIPRR74 pKa = 11.84NSGVSSPAQLASSQTLSLARR94 pKa = 11.84LPPTT98 pKa = 3.93

Molecular weight: 10.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

15806

0

15806

6750781

49

12447

427.1

47.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.406 ± 0.018

1.392 ± 0.008

5.39 ± 0.014

6.015 ± 0.02

3.803 ± 0.013

6.978 ± 0.021

2.464 ± 0.009

4.953 ± 0.015

4.917 ± 0.019

8.889 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.2 ± 0.007

3.688 ± 0.011

6.234 ± 0.022

3.869 ± 0.014

6.151 ± 0.017

8.237 ± 0.02

6.019 ± 0.014

6.039 ± 0.013

1.562 ± 0.008

2.792 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski