Tannerella sp. CAG:51

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Tannerellaceae; Tannerella; environmental samples

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2586 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7DEX2|R7DEX2_9BACT Uncharacterized protein OS=Tannerella sp. CAG:51 OX=1262979 GN=BN686_01645 PE=4 SV=1
MM1 pKa = 7.26SQQDD5 pKa = 3.75DD6 pKa = 3.98LQYY9 pKa = 11.56DD10 pKa = 3.3EE11 pKa = 6.03DD12 pKa = 4.58DD13 pKa = 3.28AVKK16 pKa = 10.28FIRR19 pKa = 11.84NFLPGEE25 pKa = 4.2VASKK29 pKa = 10.75FSDD32 pKa = 3.57DD33 pKa = 4.69DD34 pKa = 3.68INYY37 pKa = 9.97VIDD40 pKa = 5.34LIYY43 pKa = 10.73EE44 pKa = 4.55FYY46 pKa = 10.6EE47 pKa = 4.12SKK49 pKa = 11.21GYY51 pKa = 9.33MDD53 pKa = 4.95EE54 pKa = 5.05NNDD57 pKa = 3.66SEE59 pKa = 4.4VDD61 pKa = 3.55IIEE64 pKa = 5.09DD65 pKa = 3.61EE66 pKa = 4.04LTEE69 pKa = 4.02YY70 pKa = 11.13VITNARR76 pKa = 11.84KK77 pKa = 9.58NGFTRR82 pKa = 11.84FDD84 pKa = 3.91ADD86 pKa = 3.72DD87 pKa = 3.53VSMVVQGEE95 pKa = 4.36LEE97 pKa = 4.22YY98 pKa = 10.95CDD100 pKa = 3.98SIGMFEE106 pKa = 3.94

Molecular weight: 12.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7DIN2|R7DIN2_9BACT 30S ribosomal protein S18 OS=Tannerella sp. CAG:51 OX=1262979 GN=rpsR PE=3 SV=1
MM1 pKa = 7.55KK2 pKa = 10.21RR3 pKa = 11.84RR4 pKa = 11.84TVLSIVLLSLVGWCGAYY21 pKa = 10.28AQVQVADD28 pKa = 3.82TSIVQSLEE36 pKa = 3.82RR37 pKa = 11.84VTGNARR43 pKa = 11.84VRR45 pKa = 11.84LFQDD49 pKa = 2.62ARR51 pKa = 11.84LTDD54 pKa = 3.59RR55 pKa = 11.84LARR58 pKa = 11.84RR59 pKa = 11.84TGNVALSGTSSRR71 pKa = 11.84DD72 pKa = 3.25MNYY75 pKa = 7.95VTVRR79 pKa = 11.84GYY81 pKa = 10.64RR82 pKa = 11.84IQVFSDD88 pKa = 2.83NNQRR92 pKa = 11.84RR93 pKa = 11.84SKK95 pKa = 11.29DD96 pKa = 3.15EE97 pKa = 4.5AYY99 pKa = 10.62QKK101 pKa = 11.61ASMIKK106 pKa = 10.45DD107 pKa = 3.44ADD109 pKa = 4.24PEE111 pKa = 4.19LSTYY115 pKa = 8.28VTFTSPFWRR124 pKa = 11.84LRR126 pKa = 11.84VGDD129 pKa = 3.71FRR131 pKa = 11.84SFEE134 pKa = 4.01EE135 pKa = 4.46ANLKK139 pKa = 10.54LIEE142 pKa = 4.67LKK144 pKa = 9.47NTFPQFRR151 pKa = 11.84EE152 pKa = 3.78MRR154 pKa = 11.84VVKK157 pKa = 10.61DD158 pKa = 3.56MIRR161 pKa = 11.84LTRR164 pKa = 11.84IVEE167 pKa = 4.01

Molecular weight: 19.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2586

0

2586

968938

29

2488

374.7

42.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.428 ± 0.047

1.187 ± 0.017

5.606 ± 0.037

6.348 ± 0.044

4.787 ± 0.034

6.766 ± 0.044

1.739 ± 0.019

7.923 ± 0.053

6.935 ± 0.038

8.926 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.533 ± 0.021

5.393 ± 0.044

3.822 ± 0.023

3.253 ± 0.027

4.415 ± 0.038

6.575 ± 0.033

5.456 ± 0.04

6.176 ± 0.046

1.225 ± 0.019

4.503 ± 0.035
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski