Ureibacillus thermophilus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Planococcaceae; Ureibacillus

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2797 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P6UUM2|A0A4P6UUM2_9BACL Uncharacterized protein OS=Ureibacillus thermophilus OX=367743 GN=DKZ56_14145 PE=4 SV=1
MM1 pKa = 7.45ALEE4 pKa = 4.01ILKK7 pKa = 10.38LAINASTTVATVPDD21 pKa = 3.85VKK23 pKa = 10.93KK24 pKa = 10.64FFYY27 pKa = 10.59LVNSTVTGEE36 pKa = 4.15DD37 pKa = 3.21TLTIYY42 pKa = 10.99AKK44 pKa = 10.9DD45 pKa = 3.75FMDD48 pKa = 3.87DD49 pKa = 3.21TGTVGVTLPEE59 pKa = 4.11LSANNSYY66 pKa = 8.97LTVYY70 pKa = 10.57VNGVQVMQDD79 pKa = 3.38LLTYY83 pKa = 10.9NPGEE87 pKa = 4.52DD88 pKa = 3.73EE89 pKa = 4.73NGLLTIAVPEE99 pKa = 4.01EE100 pKa = 4.11SEE102 pKa = 4.43IIQNSPVVLVVTNFAPTAQTTIEE125 pKa = 4.16TT126 pKa = 4.06

Molecular weight: 13.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P6URV4|A0A4P6URV4_9BACL AMP-binding protein OS=Ureibacillus thermophilus OX=367743 GN=DKZ56_09025 PE=4 SV=1
MM1 pKa = 8.0RR2 pKa = 11.84ILPPFVRR9 pKa = 11.84LLLQLVRR16 pKa = 11.84ILPPFVRR23 pKa = 11.84LLPQLVRR30 pKa = 11.84ILPPFVRR37 pKa = 11.84LLPHH41 pKa = 6.98LVRR44 pKa = 11.84ILPPFARR51 pKa = 11.84LLLHH55 pKa = 6.81LVQILSKK62 pKa = 9.7IKK64 pKa = 10.01KK65 pKa = 9.97VSFQKK70 pKa = 10.97YY71 pKa = 6.38FF72 pKa = 3.11

Molecular weight: 8.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2797

0

2797

810556

29

1492

289.8

32.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.991 ± 0.05

0.771 ± 0.014

4.811 ± 0.034

8.229 ± 0.057

4.54 ± 0.042

6.488 ± 0.047

2.076 ± 0.019

8.273 ± 0.048

7.427 ± 0.043

9.536 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.688 ± 0.021

4.447 ± 0.036

3.65 ± 0.031

3.689 ± 0.032

4.157 ± 0.034

5.497 ± 0.03

5.166 ± 0.033

6.988 ± 0.033

0.931 ± 0.015

3.646 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski