Magnaporthe grisea (Crabgrass-specific blast fungus) (Pyricularia grisea)
Average proteome isoelectric point is 6.73
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 12455 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A6P8B9F8|A0A6P8B9F8_MAGGR uncharacterized protein OS=Magnaporthe grisea OX=148305 GN=PgNI_02904 PE=3 SV=1
MM1 pKa = 7.58 PNKK4 pKa = 10.39 SQMLLVLAAALVPLAWGGSSSSILRR29 pKa = 11.84 PRR31 pKa = 11.84 QQGTQDD37 pKa = 3.22 MPRR40 pKa = 11.84 PTFGPVPWGEE50 pKa = 3.7 QLGRR54 pKa = 11.84 DD55 pKa = 4.1 DD56 pKa = 5.18 FPCARR61 pKa = 11.84 AGQIAFTFEE70 pKa = 5.2 DD71 pKa = 4.98 GPSPYY76 pKa = 9.79 TPSILNTLSQYY87 pKa = 11.39 NIIASFFMTGSFEE100 pKa = 5.25 DD101 pKa = 3.94 GGLAQPRR108 pKa = 11.84 YY109 pKa = 9.19 HH110 pKa = 6.41 GLARR114 pKa = 11.84 FMYY117 pKa = 9.86 NQGHH121 pKa = 6.88 LLGSHH126 pKa = 6.63 SYY128 pKa = 10.44 SHH130 pKa = 7.93 DD131 pKa = 3.47 DD132 pKa = 3.23 LRR134 pKa = 11.84 SFTEE138 pKa = 3.95 EE139 pKa = 3.66 EE140 pKa = 3.98 VRR142 pKa = 11.84 ADD144 pKa = 3.94 LLEE147 pKa = 4.84 LEE149 pKa = 4.41 ATFADD154 pKa = 3.91 VLGVVPTYY162 pKa = 10.36 FRR164 pKa = 11.84 APFTEE169 pKa = 4.84 CDD171 pKa = 3.49 VGDD174 pKa = 4.08 CLVNIRR180 pKa = 11.84 PLVYY184 pKa = 10.41 HH185 pKa = 6.51 IVDD188 pKa = 3.66 YY189 pKa = 11.47 NIDD192 pKa = 3.62 SFDD195 pKa = 3.86 SYY197 pKa = 11.64 EE198 pKa = 4.19 LADD201 pKa = 4.23 PADD204 pKa = 3.38 LVAFFRR210 pKa = 11.84 EE211 pKa = 4.25 TMEE214 pKa = 4.36 NADD217 pKa = 4.2 PAVASYY223 pKa = 10.44 IVRR226 pKa = 11.84 FHH228 pKa = 6.71 DD229 pKa = 3.83 TEE231 pKa = 4.19 EE232 pKa = 4.11 VTANGLLEE240 pKa = 4.16 EE241 pKa = 5.47 FILIAATRR249 pKa = 11.84 GFEE252 pKa = 3.95 FVTVGEE258 pKa = 4.74 CLGDD262 pKa = 3.77 DD263 pKa = 3.62 PGNFYY268 pKa = 10.97 RR269 pKa = 11.84 NPQTGNALGNGNEE282 pKa = 4.69 PPPSPDD288 pKa = 3.18 PSSSTEE294 pKa = 3.85 STAVSASTSVSSSSVDD310 pKa = 3.51 LTSSAIEE317 pKa = 4.02 TTGTPEE323 pKa = 3.41 ITGNPDD329 pKa = 2.92 SMVSDD334 pKa = 4.11 TQTSTATDD342 pKa = 3.4 QEE344 pKa = 4.52 VTITLDD350 pKa = 3.14 TLTQEE355 pKa = 4.53 TPSVASTTIDD365 pKa = 3.17 TAGSDD370 pKa = 3.9 DD371 pKa = 3.72 PTITEE376 pKa = 4.41 TQTITQTEE384 pKa = 4.5 TDD386 pKa = 3.37 TADD389 pKa = 3.46 FPGATTTPAVAGTSDD404 pKa = 3.58 MVTTSDD410 pKa = 3.47 STPTITEE417 pKa = 3.67 ISVSSVADD425 pKa = 3.45 VTSSEE430 pKa = 4.25 EE431 pKa = 4.23 TTSDD435 pKa = 3.08 ASQTALEE442 pKa = 4.38 SSLDD446 pKa = 3.67 ATSSLVTTEE455 pKa = 4.68 LASQTTAAATSEE467 pKa = 4.4 EE468 pKa = 4.28 PSASHH473 pKa = 6.7 SLITMSIISEE483 pKa = 4.37 TTSTGFDD490 pKa = 3.48 TPSSSVVDD498 pKa = 4.14 GQTTSGAPSDD508 pKa = 4.98 DD509 pKa = 4.81 GITTSTSTAPTSEE522 pKa = 4.3 VPTSEE527 pKa = 3.87 VTDD530 pKa = 3.5 TGFCTSTASFAGSLVPSDD548 pKa = 3.86 TVSDD552 pKa = 3.46 ISTPTATITTTCSTATCTTAATTSADD578 pKa = 3.27 EE579 pKa = 4.3 TAPSVTSTDD588 pKa = 3.19 SGSQSSAATNFPHH601 pKa = 7.53 SIITVVTKK609 pKa = 10.07 TLDD612 pKa = 3.3 STTQDD617 pKa = 2.9 AQTNSQNTPSPSSSISPSDD636 pKa = 3.63 VTPLPLSSSTEE647 pKa = 3.66 IRR649 pKa = 11.84 DD650 pKa = 3.3 SSTIEE655 pKa = 4.11 EE656 pKa = 4.48 DD657 pKa = 3.46 TSSATAMPNSASYY670 pKa = 7.92 TTFPHH675 pKa = 5.77 QFSSAEE681 pKa = 4.09 VQSTGAASTTINDD694 pKa = 3.13 QDD696 pKa = 3.96 TNEE699 pKa = 4.2 TANPATHH706 pKa = 5.42 THH708 pKa = 6.12 YY709 pKa = 10.95 GSSTTITHH717 pKa = 6.17 TAGATDD723 pKa = 4.61 CPTATAANDD732 pKa = 4.02 DD733 pKa = 4.26 AQQSPPTPTEE743 pKa = 3.92 TPQNGGGPGQEE754 pKa = 3.81 TSSRR758 pKa = 11.84 CGGCQDD764 pKa = 3.51 GVVGGEE770 pKa = 3.94 GSFGNWLTVTRR781 pKa = 11.84 SSAIGRR787 pKa = 11.84 DD788 pKa = 3.84 DD789 pKa = 3.92 LQSAGTSAGGISAGVGIQTYY809 pKa = 9.8 VISSAQPPSASVAGQGAGEE828 pKa = 4.34 LPSGAEE834 pKa = 3.89 TGGVGGSSAVPTRR847 pKa = 11.84 VVGAGGFAVGASGCAAVFAAVMAWMVLL874 pKa = 3.56
Molecular weight: 89.51 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.691
IPC2_protein 3.732
IPC_protein 3.757
Toseland 3.541
ProMoST 3.91
Dawson 3.745
Bjellqvist 3.897
Wikipedia 3.656
Rodwell 3.579
Grimsley 3.452
Solomon 3.745
Lehninger 3.694
Nozaki 3.846
DTASelect 4.075
Thurlkill 3.579
EMBOSS 3.668
Sillero 3.884
Patrickios 1.214
IPC_peptide 3.745
IPC2_peptide 3.859
IPC2.peptide.svr19 3.783
Protein with the highest isoelectric point:
>tr|A0A6P8BIR3|A0A6P8BIR3_MAGGR Mannosyltransferase OS=Magnaporthe grisea OX=148305 GN=PgNI_01330 PE=3 SV=1
MM1 pKa = 7.26 VFQSRR6 pKa = 11.84 LRR8 pKa = 11.84 FFPRR12 pKa = 11.84 PGSHH16 pKa = 6.49 KK17 pKa = 10.62 SFRR20 pKa = 11.84 TKK22 pKa = 10.45 QKK24 pKa = 9.84 LAKK27 pKa = 9.55 AQKK30 pKa = 8.59 QNRR33 pKa = 11.84 PIPQWIRR40 pKa = 11.84 LRR42 pKa = 11.84 TGNTIRR48 pKa = 11.84 YY49 pKa = 5.79 NAKK52 pKa = 8.89 RR53 pKa = 11.84 RR54 pKa = 11.84 HH55 pKa = 4.14 WRR57 pKa = 11.84 KK58 pKa = 7.41 TRR60 pKa = 11.84 LGII63 pKa = 4.46
Molecular weight: 7.75 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.45
IPC2_protein 11.169
IPC_protein 12.544
Toseland 12.705
ProMoST 13.203
Dawson 12.705
Bjellqvist 12.705
Wikipedia 13.188
Rodwell 12.427
Grimsley 12.749
Solomon 13.203
Lehninger 13.1
Nozaki 12.705
DTASelect 12.705
Thurlkill 12.705
EMBOSS 13.203
Sillero 12.705
Patrickios 12.149
IPC_peptide 13.203
IPC2_peptide 12.193
IPC2.peptide.svr19 9.074
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
12446
9
12455
5706119
31
6480
458.1
50.35
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
9.221 ± 0.027
1.252 ± 0.01
5.761 ± 0.019
5.886 ± 0.025
3.513 ± 0.013
7.322 ± 0.024
2.325 ± 0.011
4.502 ± 0.015
4.735 ± 0.022
8.595 ± 0.024
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.256 ± 0.008
3.6 ± 0.012
6.225 ± 0.026
4.059 ± 0.02
6.288 ± 0.019
8.225 ± 0.031
5.984 ± 0.022
6.289 ± 0.018
1.412 ± 0.009
2.547 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here