Lettuce big-vein associated virus (isolate Japan/Kagawa) (LBVaV)
Average proteome isoelectric point is 6.13
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q68Y30|VP3_LBVAV Protein 3 OS=Lettuce big-vein associated virus (isolate Japan/Kagawa) OX=652962 PE=4 SV=1
MM1 pKa = 8.0 DD2 pKa = 4.93 EE3 pKa = 4.31 EE4 pKa = 4.68 NVDD7 pKa = 3.24 ITEE10 pKa = 5.02 DD11 pKa = 3.76 EE12 pKa = 4.53 LSVISDD18 pKa = 4.63 LEE20 pKa = 4.22 LDD22 pKa = 3.79 SITRR26 pKa = 11.84 VVGTNEE32 pKa = 3.12 IKK34 pKa = 9.97 TYY36 pKa = 10.66 EE37 pKa = 4.1 DD38 pKa = 3.63 YY39 pKa = 11.17 KK40 pKa = 11.32 LEE42 pKa = 3.97 EE43 pKa = 4.13 ANYY46 pKa = 10.62 LKK48 pKa = 10.97 VLDD51 pKa = 4.76 IIKK54 pKa = 10.39 KK55 pKa = 10.09 FSTSDD60 pKa = 2.8 TCEE63 pKa = 4.15 CYY65 pKa = 10.18 RR66 pKa = 11.84 CEE68 pKa = 3.89 LFEE71 pKa = 6.5 RR72 pKa = 11.84 GDD74 pKa = 3.07 IGKK77 pKa = 9.31 FLTRR81 pKa = 11.84 SEE83 pKa = 4.11 FSKK86 pKa = 10.89 LAVLYY91 pKa = 9.24 WEE93 pKa = 4.26 RR94 pKa = 11.84 CGRR97 pKa = 11.84 PRR99 pKa = 11.84 NSEE102 pKa = 3.82 ALEE105 pKa = 4.02 AFIGRR110 pKa = 11.84 HH111 pKa = 3.92 ICIRR115 pKa = 11.84 CAASILLSHH124 pKa = 6.84 HH125 pKa = 6.36 PVIAMRR131 pKa = 11.84 ADD133 pKa = 2.98 MRR135 pKa = 11.84 LRR137 pKa = 11.84 EE138 pKa = 4.04 IYY140 pKa = 9.94 IEE142 pKa = 4.62 NGDD145 pKa = 4.06 KK146 pKa = 10.35 PASSSGTLFSAKK158 pKa = 10.25 GKK160 pKa = 10.32 GPRR163 pKa = 11.84 II164 pKa = 3.84
Molecular weight: 18.69 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.092
IPC2_protein 5.207
IPC_protein 5.092
Toseland 5.029
ProMoST 5.219
Dawson 5.067
Bjellqvist 5.207
Wikipedia 4.927
Rodwell 4.991
Grimsley 4.94
Solomon 5.067
Lehninger 5.029
Nozaki 5.194
DTASelect 5.308
Thurlkill 5.029
EMBOSS 4.965
Sillero 5.27
Patrickios 4.024
IPC_peptide 5.08
IPC2_peptide 5.258
IPC2.peptide.svr19 5.309
Protein with the highest isoelectric point:
>sp|Q91QN9|NCAP_LBVAV Nucleoprotein OS=Lettuce big-vein associated virus (isolate Japan/Kagawa) OX=652962 GN=N PE=3 SV=1
MM1 pKa = 7.34 SLASRR6 pKa = 11.84 MTSVGGADD14 pKa = 3.53 NYY16 pKa = 11.47 GEE18 pKa = 4.69 SDD20 pKa = 4.0 YY21 pKa = 11.73 GWDD24 pKa = 3.53 EE25 pKa = 4.14 TVLGDD30 pKa = 3.43 MHH32 pKa = 7.15 LNSAINLDD40 pKa = 3.74 LFKK43 pKa = 10.84 EE44 pKa = 4.37 FLHH47 pKa = 6.81 IDD49 pKa = 3.41 PPVYY53 pKa = 9.86 KK54 pKa = 10.57 VKK56 pKa = 10.4 EE57 pKa = 3.95 NHH59 pKa = 6.77 RR60 pKa = 11.84 LTEE63 pKa = 4.06 EE64 pKa = 3.86 LRR66 pKa = 11.84 EE67 pKa = 4.09 LQSLARR73 pKa = 11.84 KK74 pKa = 9.12 GSKK77 pKa = 9.68 IEE79 pKa = 3.89 IGFQRR84 pKa = 11.84 LFARR88 pKa = 11.84 MFPRR92 pKa = 11.84 DD93 pKa = 3.56 GNLIPMDD100 pKa = 3.57 STMTRR105 pKa = 11.84 MIMKK109 pKa = 9.93 IIRR112 pKa = 11.84 DD113 pKa = 3.49 SGTKK117 pKa = 9.73 YY118 pKa = 10.92 KK119 pKa = 10.87 LGIPLLGISEE129 pKa = 4.13 EE130 pKa = 4.27 MIKK133 pKa = 10.28 KK134 pKa = 10.11 GAMVPSNLVYY144 pKa = 10.86 SFNCFLNIIYY154 pKa = 10.03 GRR156 pKa = 11.84 SEE158 pKa = 4.19 WIRR161 pKa = 11.84 SEE163 pKa = 4.26 GIAIRR168 pKa = 11.84 FKK170 pKa = 10.04 MYY172 pKa = 9.64 EE173 pKa = 3.53 HH174 pKa = 6.66 GRR176 pKa = 11.84 FIRR179 pKa = 11.84 RR180 pKa = 11.84 DD181 pKa = 3.31 LTISEE186 pKa = 4.41 KK187 pKa = 10.47 EE188 pKa = 3.81 YY189 pKa = 10.93 NFIVGKK195 pKa = 9.54 EE196 pKa = 4.04 VVEE199 pKa = 4.2 IRR201 pKa = 11.84 ASRR204 pKa = 11.84 RR205 pKa = 11.84 KK206 pKa = 9.38 EE207 pKa = 3.85 RR208 pKa = 11.84 FIADD212 pKa = 3.76 YY213 pKa = 11.26 NSLLLLLDD221 pKa = 3.46 VAGQRR226 pKa = 11.84 ICAHH230 pKa = 6.84 LCSQLGEE237 pKa = 4.0 ISGVPGSLSRR247 pKa = 11.84 YY248 pKa = 9.26 HH249 pKa = 7.79 LEE251 pKa = 4.31 TLCTAGDD258 pKa = 3.76 RR259 pKa = 11.84 MIEE262 pKa = 3.95 RR263 pKa = 11.84 CGNKK267 pKa = 9.7 AYY269 pKa = 9.87 EE270 pKa = 4.01 VLGMYY275 pKa = 7.89 EE276 pKa = 4.09 ALCVGRR282 pKa = 11.84 LLEE285 pKa = 4.51 NNPDD289 pKa = 4.19 GITDD293 pKa = 3.71 HH294 pKa = 6.32 TQFSANCEE302 pKa = 4.03 EE303 pKa = 4.39 EE304 pKa = 4.22 LQEE307 pKa = 4.73 LIAGSVEE314 pKa = 3.87 PAFMKK319 pKa = 10.67 SQVDD323 pKa = 4.64 LIKK326 pKa = 8.86 TTLEE330 pKa = 3.65 KK331 pKa = 10.43 MKK333 pKa = 10.96 NQDD336 pKa = 2.66 ISNAFCLYY344 pKa = 10.05 RR345 pKa = 11.84 VWGHH349 pKa = 5.47 PTVDD353 pKa = 3.26 IYY355 pKa = 11.48 EE356 pKa = 4.35 GMKK359 pKa = 10.06 KK360 pKa = 9.12 VHH362 pKa = 6.67 TIGTKK367 pKa = 10.45 VKK369 pKa = 10.46 VIPPNLGTIMVCQFRR384 pKa = 11.84 KK385 pKa = 9.38 MFMSTFFKK393 pKa = 10.21 KK394 pKa = 9.3 HH395 pKa = 5.25 HH396 pKa = 7.34 RR397 pKa = 11.84 YY398 pKa = 8.89 PPITGTPGEE407 pKa = 4.11 YY408 pKa = 10.23 LEE410 pKa = 5.68 RR411 pKa = 11.84 CLKK414 pKa = 10.95 DD415 pKa = 3.29 NVAIRR420 pKa = 11.84 IEE422 pKa = 3.88 HH423 pKa = 6.65 LAYY426 pKa = 10.62 NLRR429 pKa = 11.84 DD430 pKa = 3.57 FEE432 pKa = 4.59 FIRR435 pKa = 11.84 IGEE438 pKa = 4.47 TYY440 pKa = 10.45 SVPDD444 pKa = 4.01 TFDD447 pKa = 3.0 MCHH450 pKa = 5.68 VLNDD454 pKa = 3.98 KK455 pKa = 10.63 AVSPDD460 pKa = 3.15 MSEE463 pKa = 3.92 LLEE466 pKa = 4.46 SIKK469 pKa = 10.77 NGKK472 pKa = 7.83 GTSCGAKK479 pKa = 9.4 RR480 pKa = 11.84 RR481 pKa = 11.84 GMLRR485 pKa = 11.84 WMEE488 pKa = 4.18 GDD490 pKa = 3.64 SLNCKK495 pKa = 10.23 SFLSDD500 pKa = 3.08 IDD502 pKa = 3.77 EE503 pKa = 4.82 KK504 pKa = 11.43 GLSEE508 pKa = 4.4 EE509 pKa = 4.39 DD510 pKa = 3.9 LLIGMYY516 pKa = 10.11 EE517 pKa = 3.98 KK518 pKa = 10.66 EE519 pKa = 4.13 RR520 pKa = 11.84 EE521 pKa = 4.11 IKK523 pKa = 10.1 VAARR527 pKa = 11.84 MYY529 pKa = 10.93 SLMTEE534 pKa = 4.03 RR535 pKa = 11.84 MRR537 pKa = 11.84 YY538 pKa = 9.63 YY539 pKa = 10.54 FVLTEE544 pKa = 4.47 GLIADD549 pKa = 4.79 YY550 pKa = 10.37 ILPHH554 pKa = 6.45 FPEE557 pKa = 3.86 ITMKK561 pKa = 11.02 DD562 pKa = 3.59 SLNVLLKK569 pKa = 10.96 KK570 pKa = 9.41 MWEE573 pKa = 4.19 SGGQRR578 pKa = 11.84 SIGSMDD584 pKa = 3.22 VNINIDD590 pKa = 3.59 FSKK593 pKa = 10.25 WNTNMRR599 pKa = 11.84 EE600 pKa = 4.27 GPTSDD605 pKa = 3.52 TFRR608 pKa = 11.84 EE609 pKa = 3.71 MDD611 pKa = 4.17 GIFGFKK617 pKa = 10.17 RR618 pKa = 11.84 LIARR622 pKa = 11.84 THH624 pKa = 6.37 EE625 pKa = 4.09 IFNASLVYY633 pKa = 10.15 SASGKK638 pKa = 9.35 YY639 pKa = 10.33 LPTIEE644 pKa = 5.35 DD645 pKa = 3.47 GRR647 pKa = 11.84 ILDD650 pKa = 4.96 DD651 pKa = 4.55 PPMCYY656 pKa = 9.14 RR657 pKa = 11.84 GHH659 pKa = 7.06 LGGFEE664 pKa = 4.4 GLRR667 pKa = 11.84 QKK669 pKa = 10.71 GWTVATVCLLAYY681 pKa = 10.49 LSEE684 pKa = 4.16 QNKK687 pKa = 9.39 IQMKK691 pKa = 10.65 LMGQGDD697 pKa = 3.82 NQIIRR702 pKa = 11.84 LRR704 pKa = 11.84 MPTSYY709 pKa = 10.14 WDD711 pKa = 3.55 SLRR714 pKa = 11.84 LTEE717 pKa = 4.48 EE718 pKa = 4.04 MKK720 pKa = 10.83 KK721 pKa = 10.22 KK722 pKa = 9.38 EE723 pKa = 4.04 ARR725 pKa = 11.84 ILSDD729 pKa = 3.39 KK730 pKa = 10.25 FVHH733 pKa = 6.12 EE734 pKa = 4.15 MDD736 pKa = 4.75 IIFTGVGLPIKK747 pKa = 10.62 VRR749 pKa = 11.84 EE750 pKa = 4.19 TWKK753 pKa = 8.81 STRR756 pKa = 11.84 LFMYY760 pKa = 9.57 GKK762 pKa = 10.86 VMLLDD767 pKa = 4.3 GRR769 pKa = 11.84 QLPQWYY775 pKa = 9.4 KK776 pKa = 9.37 KK777 pKa = 7.27 TLRR780 pKa = 11.84 SYY782 pKa = 11.17 ALSNEE787 pKa = 3.92 GTLTISGVIGTIATNMCAAGGGSEE811 pKa = 4.73 VPCVMYY817 pKa = 10.74 LFFLLLAEE825 pKa = 4.42 WSLEE829 pKa = 3.61 FMFRR833 pKa = 11.84 YY834 pKa = 9.94 HH835 pKa = 7.02 PFTRR839 pKa = 11.84 VGIKK843 pKa = 10.26 DD844 pKa = 3.51 GSSMEE849 pKa = 3.71 FRR851 pKa = 11.84 LNEE854 pKa = 3.74 KK855 pKa = 9.9 GGYY858 pKa = 6.84 VHH860 pKa = 7.16 KK861 pKa = 9.47 QTRR864 pKa = 11.84 KK865 pKa = 8.4 TNNLWLKK872 pKa = 10.25 SLLVLVPTAVGGSVTIPLTGFIMRR896 pKa = 11.84 GFPDD900 pKa = 3.66 KK901 pKa = 11.08 ASEE904 pKa = 4.67 GYY906 pKa = 10.45 AWLKK910 pKa = 10.48 FLGSSKK916 pKa = 11.02 SPIQGFLKK924 pKa = 10.59 NFYY927 pKa = 9.86 TFLPNDD933 pKa = 3.63 TVEE936 pKa = 5.41 ADD938 pKa = 3.92 MLVQSPFSLNHH949 pKa = 6.04 KK950 pKa = 9.95 RR951 pKa = 11.84 PPTPGLQTKK960 pKa = 9.49 EE961 pKa = 4.43 NIRR964 pKa = 11.84 EE965 pKa = 4.18 WLLSTPRR972 pKa = 11.84 FQQNRR977 pKa = 11.84 FIRR980 pKa = 11.84 SMQVLLSGFDD990 pKa = 3.24 KK991 pKa = 11.04 KK992 pKa = 10.63 SVCRR996 pKa = 11.84 EE997 pKa = 3.77 LLTEE1001 pKa = 4.54 RR1002 pKa = 11.84 MNPLISHH1009 pKa = 6.52 EE1010 pKa = 4.25 VYY1012 pKa = 8.84 EE1013 pKa = 4.72 TFGHH1017 pKa = 6.23 VYY1019 pKa = 10.58 CEE1021 pKa = 4.61 GIVARR1026 pKa = 11.84 VEE1028 pKa = 3.7 NTRR1031 pKa = 11.84 TIRR1034 pKa = 11.84 TLHH1037 pKa = 7.03 LSRR1040 pKa = 11.84 EE1041 pKa = 4.06 DD1042 pKa = 3.34 RR1043 pKa = 11.84 KK1044 pKa = 10.62 PIVAKK1049 pKa = 10.95 LMTDD1053 pKa = 3.13 EE1054 pKa = 4.14 MAYY1057 pKa = 9.19 IAYY1060 pKa = 7.84 MWWRR1064 pKa = 11.84 GNTKK1068 pKa = 10.28 GEE1070 pKa = 4.12 VFEE1073 pKa = 4.54 EE1074 pKa = 4.92 CATKK1078 pKa = 10.13 QARR1081 pKa = 11.84 KK1082 pKa = 9.17 GRR1084 pKa = 11.84 NVGWKK1089 pKa = 9.66 RR1090 pKa = 11.84 EE1091 pKa = 4.01 IMGITTPHH1099 pKa = 6.59 PLEE1102 pKa = 4.01 VLFQSVCRR1110 pKa = 11.84 PGDD1113 pKa = 3.22 QCQRR1117 pKa = 11.84 SDD1119 pKa = 4.75 DD1120 pKa = 4.36 YY1121 pKa = 10.95 ITSKK1125 pKa = 10.97 LVDD1128 pKa = 4.48 DD1129 pKa = 5.15 GKK1131 pKa = 11.1 FPPFLGSKK1139 pKa = 9.6 IKK1141 pKa = 10.96 NKK1143 pKa = 9.91 VYY1145 pKa = 10.71 SLQDD1149 pKa = 3.07 EE1150 pKa = 4.45 EE1151 pKa = 4.85 ARR1153 pKa = 11.84 RR1154 pKa = 11.84 EE1155 pKa = 3.98 PLIKK1159 pKa = 9.91 TGARR1163 pKa = 11.84 LARR1166 pKa = 11.84 QFNWIGMGEE1175 pKa = 4.08 NMRR1178 pKa = 11.84 GLVLKK1183 pKa = 10.53 NVGSICDD1190 pKa = 3.21 VSVFDD1195 pKa = 5.82 KK1196 pKa = 11.17 FVDD1199 pKa = 4.75 DD1200 pKa = 5.23 DD1201 pKa = 4.69 PSDD1204 pKa = 3.66 NLYY1207 pKa = 10.16 TGSLMHH1213 pKa = 7.29 RR1214 pKa = 11.84 FTPSSVSEE1222 pKa = 4.26 GCFINYY1228 pKa = 9.15 APQVGHH1234 pKa = 6.51 KK1235 pKa = 10.43 VFMSSDD1241 pKa = 3.71 TLPSLSRR1248 pKa = 11.84 GQTNYY1253 pKa = 9.39 TFHH1256 pKa = 6.53 FQAMYY1261 pKa = 10.81 CFLQYY1266 pKa = 10.69 SISKK1270 pKa = 9.89 SGNEE1274 pKa = 4.19 GSYY1277 pKa = 9.62 HH1278 pKa = 5.19 HH1279 pKa = 7.34 HH1280 pKa = 7.02 IMCQDD1285 pKa = 3.34 CVVPVEE1291 pKa = 5.6 DD1292 pKa = 5.0 EE1293 pKa = 4.45 FDD1295 pKa = 5.45 DD1296 pKa = 4.62 IPNEE1300 pKa = 4.03 TPSIVKK1306 pKa = 9.86 AQEE1309 pKa = 3.7 EE1310 pKa = 5.1 QYY1312 pKa = 11.5 VSIIRR1317 pKa = 11.84 TTLGYY1322 pKa = 10.03 IHH1324 pKa = 6.96 TKK1326 pKa = 9.26 PRR1328 pKa = 11.84 SAMVLEE1334 pKa = 4.89 DD1335 pKa = 3.43 KK1336 pKa = 11.29 SPIGRR1341 pKa = 11.84 YY1342 pKa = 8.87 IEE1344 pKa = 4.86 DD1345 pKa = 3.62 VEE1347 pKa = 4.32 GHH1349 pKa = 5.53 EE1350 pKa = 4.48 KK1351 pKa = 10.35 EE1352 pKa = 4.59 LYY1354 pKa = 9.92 SGVVEE1359 pKa = 3.89 LLCWKK1364 pKa = 10.2 SALEE1368 pKa = 3.82 ILGRR1372 pKa = 11.84 TRR1374 pKa = 11.84 DD1375 pKa = 3.3 THH1377 pKa = 5.57 ATVGTEE1383 pKa = 5.37 DD1384 pKa = 3.42 LQGWPRR1390 pKa = 11.84 IYY1392 pKa = 10.26 AYY1394 pKa = 9.7 KK1395 pKa = 9.91 VSRR1398 pKa = 11.84 RR1399 pKa = 11.84 HH1400 pKa = 6.22 IIGKK1404 pKa = 6.04 VTSFILYY1411 pKa = 9.63 ILAVQIGEE1419 pKa = 4.32 LPLPYY1424 pKa = 10.63 SMEE1427 pKa = 4.11 RR1428 pKa = 11.84 VSRR1431 pKa = 11.84 RR1432 pKa = 11.84 AIDD1435 pKa = 3.41 VVSRR1439 pKa = 11.84 VGLEE1443 pKa = 3.9 GFSAVASLCLGRR1455 pKa = 11.84 DD1456 pKa = 2.94 IPMVNDD1462 pKa = 2.98 VVTIVDD1468 pKa = 3.91 GFAYY1472 pKa = 9.8 PEE1474 pKa = 4.3 TVSVCLRR1481 pKa = 11.84 SIKK1484 pKa = 10.56 ASILMTIGKK1493 pKa = 8.98 VIRR1496 pKa = 11.84 VDD1498 pKa = 3.29 GFMSRR1503 pKa = 11.84 RR1504 pKa = 11.84 SVYY1507 pKa = 8.6 PTEE1510 pKa = 5.18 SMTSDD1515 pKa = 3.28 DD1516 pKa = 4.15 FLRR1519 pKa = 11.84 ILGFKK1524 pKa = 10.41 AVIFYY1529 pKa = 10.79 GCTKK1533 pKa = 10.0 IHH1535 pKa = 6.68 EE1536 pKa = 4.51 KK1537 pKa = 10.71 CQLKK1541 pKa = 10.84 GLDD1544 pKa = 3.27 QVTYY1548 pKa = 11.18 AEE1550 pKa = 4.59 MMCHH1554 pKa = 6.02 HH1555 pKa = 7.11 RR1556 pKa = 11.84 CLEE1559 pKa = 4.07 KK1560 pKa = 10.93 LLSSNLLTHH1569 pKa = 5.59 MTMDD1573 pKa = 3.47 RR1574 pKa = 11.84 AMKK1577 pKa = 9.5 YY1578 pKa = 10.58 LPIKK1582 pKa = 8.35 ITKK1585 pKa = 9.02 ILPKK1589 pKa = 10.14 ISSTRR1594 pKa = 11.84 PNTIAVTRR1602 pKa = 11.84 EE1603 pKa = 3.73 VEE1605 pKa = 4.09 TEE1607 pKa = 3.6 NRR1609 pKa = 11.84 EE1610 pKa = 4.0 FSDD1613 pKa = 3.33 TFPIDD1618 pKa = 3.27 EE1619 pKa = 4.07 RR1620 pKa = 11.84 VTYY1623 pKa = 10.63 PEE1625 pKa = 4.56 MDD1627 pKa = 3.41 LKK1629 pKa = 9.43 TNQMIQYY1636 pKa = 6.76 PTSSIYY1642 pKa = 9.93 KK1643 pKa = 9.38 WSDD1646 pKa = 2.49 ILLGIEE1652 pKa = 4.63 HH1653 pKa = 7.14 YY1654 pKa = 11.11 DD1655 pKa = 3.38 HH1656 pKa = 6.48 VVVMGDD1662 pKa = 3.51 GTGGTSMVAAHH1673 pKa = 6.92 MFPNSTIYY1681 pKa = 10.53 PMALLEE1687 pKa = 4.47 SKK1689 pKa = 10.84 NLIPQDD1695 pKa = 4.09 MEE1697 pKa = 4.32 SLAPPMSRR1705 pKa = 11.84 KK1706 pKa = 8.19 LTNVDD1711 pKa = 3.2 SSLLIDD1717 pKa = 4.78 LPDD1720 pKa = 5.78 DD1721 pKa = 3.07 IRR1723 pKa = 11.84 KK1724 pKa = 7.28 PTFRR1728 pKa = 11.84 TRR1730 pKa = 11.84 MLEE1733 pKa = 3.86 RR1734 pKa = 11.84 VSLMRR1739 pKa = 11.84 GNILIISDD1747 pKa = 3.66 IEE1749 pKa = 4.33 GTGTLFRR1756 pKa = 11.84 DD1757 pKa = 3.56 IVSTCLYY1764 pKa = 9.18 MPTSTDD1770 pKa = 3.1 VLMKK1774 pKa = 9.62 THH1776 pKa = 7.27 LADD1779 pKa = 3.55 LCGSYY1784 pKa = 11.68 YY1785 pKa = 9.61 MMKK1788 pKa = 9.63 GAGRR1792 pKa = 11.84 IRR1794 pKa = 11.84 LRR1796 pKa = 11.84 GSRR1799 pKa = 11.84 LANLRR1804 pKa = 11.84 YY1805 pKa = 10.42 GEE1807 pKa = 4.29 VFVSFRR1813 pKa = 11.84 VTGGNIRR1820 pKa = 11.84 PNRR1823 pKa = 11.84 RR1824 pKa = 11.84 GLGNCIQEE1832 pKa = 4.14 VMIGLMNTQIEE1843 pKa = 4.76 TATGMLSQIEE1853 pKa = 4.75 SMFPLAADD1861 pKa = 3.35 MSMNIAMMKK1870 pKa = 7.39 MASWGGSFSRR1880 pKa = 11.84 KK1881 pKa = 9.07 VLGEE1885 pKa = 4.64 DD1886 pKa = 3.55 GLKK1889 pKa = 11.01 LMGYY1893 pKa = 8.93 VYY1895 pKa = 10.51 QYY1897 pKa = 11.39 INTHH1901 pKa = 4.52 YY1902 pKa = 10.06 HH1903 pKa = 5.91 FASSSYY1909 pKa = 10.68 RR1910 pKa = 11.84 PGDD1913 pKa = 3.36 NRR1915 pKa = 11.84 TVTPRR1920 pKa = 11.84 RR1921 pKa = 11.84 KK1922 pKa = 9.74 EE1923 pKa = 3.94 DD1924 pKa = 3.42 LTKK1927 pKa = 10.63 LLCSIMLGVYY1937 pKa = 10.59 GEE1939 pKa = 4.18 DD1940 pKa = 3.44 TEE1942 pKa = 4.74 TIEE1945 pKa = 4.55 EE1946 pKa = 4.17 VSKK1949 pKa = 10.05 YY1950 pKa = 8.54 TLIGSKK1956 pKa = 10.04 KK1957 pKa = 8.63 GVPGKK1962 pKa = 10.74 SYY1964 pKa = 10.91 FKK1966 pKa = 10.94 VLMWKK1971 pKa = 8.65 TGTKK1975 pKa = 9.82 RR1976 pKa = 11.84 ALEE1979 pKa = 4.13 HH1980 pKa = 6.85 DD1981 pKa = 4.14 EE1982 pKa = 4.3 YY1983 pKa = 11.03 MVGRR1987 pKa = 11.84 AIRR1990 pKa = 11.84 NYY1992 pKa = 8.01 RR1993 pKa = 11.84 TRR1995 pKa = 11.84 ILEE1998 pKa = 4.13 AKK2000 pKa = 10.14 KK2001 pKa = 10.43 LDD2003 pKa = 3.96 GPIGLPFHH2011 pKa = 6.87 SGSLRR2016 pKa = 11.84 KK2017 pKa = 9.27 IATWGYY2023 pKa = 9.56 KK2024 pKa = 9.82 IPISASGGWIDD2035 pKa = 4.14 NHH2037 pKa = 5.94 LQII2040 pKa = 5.61
Molecular weight: 232.11 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.372
IPC2_protein 7.79
IPC_protein 7.556
Toseland 7.249
ProMoST 8.185
Dawson 8.317
Bjellqvist 8.668
Wikipedia 8.258
Rodwell 8.361
Grimsley 7.322
Solomon 8.346
Lehninger 8.346
Nozaki 8.814
DTASelect 8.404
Thurlkill 8.463
EMBOSS 8.521
Sillero 8.77
Patrickios 4.355
IPC_peptide 8.331
IPC2_peptide 7.527
IPC2.peptide.svr19 7.758
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
6
0
6
3592
164
2040
598.7
67.46
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.679 ± 1.435
1.643 ± 0.364
5.429 ± 0.404
6.709 ± 0.494
3.87 ± 0.349
7.016 ± 0.604
2.311 ± 0.204
6.876 ± 0.354
6.292 ± 0.651
8.964 ± 0.487
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.953 ± 0.55
3.452 ± 0.274
4.259 ± 0.35
2.45 ± 0.293
5.986 ± 0.626
8.018 ± 0.88
6.153 ± 0.485
6.153 ± 0.359
1.253 ± 0.13
3.536 ± 0.344
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here