Wuhan house centipede virus 9
Average proteome isoelectric point is 6.89
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KHN0|A0A1L3KHN0_9VIRU RdRp OS=Wuhan house centipede virus 9 OX=1923713 PE=4 SV=1
MM1 pKa = 7.61 SNPVMNQDD9 pKa = 3.61 RR10 pKa = 11.84 KK11 pKa = 8.21 TLASMIEE18 pKa = 3.86 DD19 pKa = 3.05 RR20 pKa = 11.84 GFAMRR25 pKa = 11.84 QDD27 pKa = 3.55 LHH29 pKa = 5.98 TLQTLAASADD39 pKa = 3.46 RR40 pKa = 11.84 SYY42 pKa = 11.01 FSHH45 pKa = 7.72 LGEE48 pKa = 4.67 PSDD51 pKa = 4.41 EE52 pKa = 3.93 IFKK55 pKa = 10.94 AVLHH59 pKa = 6.88 DD60 pKa = 3.95 EE61 pKa = 4.59 VKK63 pKa = 10.53 VDD65 pKa = 3.63 PAGQVDD71 pKa = 3.96 TSYY74 pKa = 11.45 LRR76 pKa = 11.84 VVSDD80 pKa = 3.76 GCPISKK86 pKa = 9.48 LQHH89 pKa = 6.72 DD90 pKa = 5.5 GEE92 pKa = 4.68 QIHH95 pKa = 7.03 PPTSNKK101 pKa = 9.85 VGGKK105 pKa = 10.04 VSVKK109 pKa = 10.28 RR110 pKa = 11.84 NFGSRR115 pKa = 11.84 PSKK118 pKa = 10.7 DD119 pKa = 3.16 ATLLRR124 pKa = 11.84 ALVAAYY130 pKa = 8.75 PDD132 pKa = 3.72 KK133 pKa = 11.07 EE134 pKa = 4.32 YY135 pKa = 11.09 LCEE138 pKa = 4.05 VNQKK142 pKa = 9.21 VVYY145 pKa = 9.92 TSGTPKK151 pKa = 10.61 GFSTRR156 pKa = 11.84 LRR158 pKa = 11.84 EE159 pKa = 3.93 LTTRR163 pKa = 11.84 KK164 pKa = 9.87 CVGEE168 pKa = 4.43 GSATTIAKK176 pKa = 10.09 KK177 pKa = 10.52 LEE179 pKa = 4.0 KK180 pKa = 10.39 LLPTGALPDD189 pKa = 3.23 WHH191 pKa = 7.43 DD192 pKa = 3.18 IAGLFEE198 pKa = 4.66 IMHH201 pKa = 5.97 TTQSAGAGAPYY212 pKa = 9.41 WVSKK216 pKa = 11.34 AEE218 pKa = 3.85 AALPMMEE225 pKa = 4.82 TILPLVIKK233 pKa = 10.21 ALEE236 pKa = 4.36 AGEE239 pKa = 3.86 ITQFMKK245 pKa = 10.7 EE246 pKa = 4.01 NPEE249 pKa = 4.15 LFLSEE254 pKa = 4.5 VKK256 pKa = 10.87 NKK258 pKa = 7.83 TDD260 pKa = 3.09 RR261 pKa = 11.84 YY262 pKa = 8.3 EE263 pKa = 4.01 TAKK266 pKa = 10.77 LDD268 pKa = 4.05 DD269 pKa = 3.61 KK270 pKa = 11.2 VRR272 pKa = 11.84 PYY274 pKa = 10.94 VSQPFHH280 pKa = 6.55 FSALFSAILQPFCGSLKK297 pKa = 9.47 TWDD300 pKa = 3.93 SQEE303 pKa = 4.09 STMNAYY309 pKa = 8.82 GWSMANGGIEE319 pKa = 4.48 RR320 pKa = 11.84 IYY322 pKa = 10.83 QRR324 pKa = 11.84 VAHH327 pKa = 5.51 LQEE330 pKa = 4.24 RR331 pKa = 11.84 TSEE334 pKa = 3.81 DD335 pKa = 2.68 RR336 pKa = 11.84 KK337 pKa = 10.26 IRR339 pKa = 11.84 FKK341 pKa = 10.76 IGLYY345 pKa = 10.78 GDD347 pKa = 3.66 DD348 pKa = 3.93 AKK350 pKa = 11.38 LFFINRR356 pKa = 11.84 DD357 pKa = 3.34 AEE359 pKa = 4.65 VYY361 pKa = 10.66 AVDD364 pKa = 3.57 PDD366 pKa = 3.71 FRR368 pKa = 11.84 QMDD371 pKa = 4.06 GSVDD375 pKa = 3.13 RR376 pKa = 11.84 HH377 pKa = 4.61 TVEE380 pKa = 6.58 GVAKK384 pKa = 9.13 WISRR388 pKa = 11.84 AYY390 pKa = 8.86 TEE392 pKa = 4.08 QHH394 pKa = 6.13 GEE396 pKa = 4.06 SPFWDD401 pKa = 3.41 NVLKK405 pKa = 11.17 LMVEE409 pKa = 4.79 FATDD413 pKa = 3.21 PTFVVNGTTVYY424 pKa = 10.66 KK425 pKa = 10.54 KK426 pKa = 9.56 PQKK429 pKa = 10.49 DD430 pKa = 3.88 GILSGVVGTTLFDD443 pKa = 3.63 TAKK446 pKa = 10.41 SALAYY451 pKa = 10.49 SHH453 pKa = 6.99 LLDD456 pKa = 4.03 EE457 pKa = 5.6 FKK459 pKa = 10.55 IEE461 pKa = 4.13 PKK463 pKa = 10.33 LFHH466 pKa = 6.77 DD467 pKa = 4.85 AKK469 pKa = 10.67 RR470 pKa = 11.84 VTKK473 pKa = 10.18 FLKK476 pKa = 10.24 DD477 pKa = 3.15 KK478 pKa = 10.68 HH479 pKa = 6.34 GLVVKK484 pKa = 10.36 EE485 pKa = 4.37 GTWTPEE491 pKa = 3.91 KK492 pKa = 10.77 LSMEE496 pKa = 4.45 PEE498 pKa = 4.36 HH499 pKa = 7.52 GEE501 pKa = 3.78 LWTKK505 pKa = 10.97 NKK507 pKa = 9.81 FLGMSFMWYY516 pKa = 10.11 HH517 pKa = 7.37 DD518 pKa = 4.21 DD519 pKa = 4.15 QVGAPTLVPYY529 pKa = 10.87 LSDD532 pKa = 4.4 DD533 pKa = 3.46 DD534 pKa = 4.13 WVNMILHH541 pKa = 6.34 PRR543 pKa = 11.84 EE544 pKa = 4.34 SITGKK549 pKa = 10.76 KK550 pKa = 10.31 LGDD553 pKa = 3.48 LAKK556 pKa = 10.44 QRR558 pKa = 11.84 ISFDD562 pKa = 3.14 RR563 pKa = 11.84 ARR565 pKa = 11.84 GYY567 pKa = 10.92 LITGAAFNPQIADD580 pKa = 4.07 LLYY583 pKa = 10.69 KK584 pKa = 10.72 AIDD587 pKa = 4.14 LVPATAILMAVAAGGGKK604 pKa = 10.15 GEE606 pKa = 4.56 SPGEE610 pKa = 3.89 HH611 pKa = 6.07 QIVGDD616 pKa = 3.89 SFLFPSSEE624 pKa = 4.15 GVPSVSWCAQLYY636 pKa = 10.8 AGVEE640 pKa = 4.22 NKK642 pKa = 9.74 TGWQLVYY649 pKa = 8.57 PTIDD653 pKa = 3.15 AKK655 pKa = 10.99 LQNTRR660 pKa = 11.84 TSWKK664 pKa = 9.25 SRR666 pKa = 11.84 LRR668 pKa = 11.84 NSVKK672 pKa = 10.19 EE673 pKa = 3.75 ISYY676 pKa = 11.06 APLASEE682 pKa = 4.42 IPSVLQAVFEE692 pKa = 4.52 PPPQVEE698 pKa = 4.11 VAAATNFSKK707 pKa = 10.85 RR708 pKa = 11.84 FVNRR712 pKa = 11.84 VDD714 pKa = 3.28 IVLAPTQKK722 pKa = 10.68 ADD724 pKa = 3.15 KK725 pKa = 8.71 LQPVAEE731 pKa = 4.16 YY732 pKa = 10.3 LQAVVSKK739 pKa = 8.52 TGPMMEE745 pKa = 4.45 AQLASKK751 pKa = 10.16 IGRR754 pKa = 11.84 PVPKK758 pKa = 9.4 EE759 pKa = 3.74 LKK761 pKa = 10.08 RR762 pKa = 11.84 VTFDD766 pKa = 3.2 APTLRR771 pKa = 11.84 SVVVDD776 pKa = 4.25 TPPSLVSKK784 pKa = 9.41 SHH786 pKa = 5.63 VSAKK790 pKa = 10.44 VLLALKK796 pKa = 7.16 TFPMTKK802 pKa = 9.56 PYY804 pKa = 8.72 PTIEE808 pKa = 4.09 WLNILASVSQRR819 pKa = 11.84 KK820 pKa = 8.49 LVVKK824 pKa = 7.37 TTVTDD829 pKa = 3.24 TLTNYY834 pKa = 9.84 KK835 pKa = 9.91 RR836 pKa = 11.84 VAFFLNEE843 pKa = 3.99 EE844 pKa = 3.97 VDD846 pKa = 3.47 KK847 pKa = 11.26 HH848 pKa = 5.3 VLGFIEE854 pKa = 4.74 GLQPAKK860 pKa = 10.24 DD861 pKa = 3.78 LKK863 pKa = 10.92 QMFVEE868 pKa = 5.11 RR869 pKa = 11.84 VYY871 pKa = 11.14 GMCYY875 pKa = 10.0 ALHH878 pKa = 5.5 EE879 pKa = 4.87 HH880 pKa = 6.13 GVKK883 pKa = 10.01 IFQVIGKK890 pKa = 9.0 KK891 pKa = 10.47 DD892 pKa = 3.77 PEE894 pKa = 3.93 AKK896 pKa = 9.35 IYY898 pKa = 10.37 KK899 pKa = 8.76 MPVVMHH905 pKa = 6.52 PEE907 pKa = 3.84 EE908 pKa = 4.24 TQEE911 pKa = 4.38 FDD913 pKa = 5.47 AILKK917 pKa = 10.08 NLTASAHH924 pKa = 5.68 GDD926 pKa = 2.94 TWAFIADD933 pKa = 3.35 ADD935 pKa = 3.91 ARR937 pKa = 11.84 EE938 pKa = 4.16 IQPDD942 pKa = 3.62 TTDD945 pKa = 3.14 AEE947 pKa = 3.99 IRR949 pKa = 11.84 EE950 pKa = 4.15 ISNQLEE956 pKa = 4.14 YY957 pKa = 11.09 AKK959 pKa = 10.57 RR960 pKa = 11.84 LVGNLQTTLEE970 pKa = 4.09 KK971 pKa = 10.66 LIEE974 pKa = 4.2 RR975 pKa = 11.84 KK976 pKa = 9.67 YY977 pKa = 11.13 GKK979 pKa = 8.68 QQQKK983 pKa = 10.57 EE984 pKa = 4.38 SGSKK988 pKa = 10.71 AKK990 pKa = 10.2 DD991 pKa = 3.23 APKK994 pKa = 10.24 RR995 pKa = 11.84 PQKK998 pKa = 10.78 AKK1000 pKa = 10.17 QQQQQQQNKK1009 pKa = 9.48 LYY1011 pKa = 9.83 IYY1013 pKa = 9.8 PDD1015 pKa = 3.23 IPNPSLLRR1023 pKa = 11.84 EE1024 pKa = 4.26 CSLEE1028 pKa = 3.85 FHH1030 pKa = 7.02
Molecular weight: 115.25 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.893
IPC2_protein 7.322
IPC_protein 7.263
Toseland 7.322
ProMoST 7.746
Dawson 8.009
Bjellqvist 8.112
Wikipedia 7.951
Rodwell 8.039
Grimsley 7.439
Solomon 8.068
Lehninger 8.068
Nozaki 8.258
DTASelect 8.053
Thurlkill 8.141
EMBOSS 8.244
Sillero 8.346
Patrickios 4.596
IPC_peptide 8.068
IPC2_peptide 7.117
IPC2.peptide.svr19 7.398
Protein with the highest isoelectric point:
>tr|A0A1L3KHN0|A0A1L3KHN0_9VIRU RdRp OS=Wuhan house centipede virus 9 OX=1923713 PE=4 SV=1
MM1 pKa = 7.61 SNPVMNQDD9 pKa = 3.61 RR10 pKa = 11.84 KK11 pKa = 8.21 TLASMIEE18 pKa = 3.86 DD19 pKa = 3.05 RR20 pKa = 11.84 GFAMRR25 pKa = 11.84 QDD27 pKa = 3.55 LHH29 pKa = 5.98 TLQTLAASADD39 pKa = 3.46 RR40 pKa = 11.84 SYY42 pKa = 11.01 FSHH45 pKa = 7.72 LGEE48 pKa = 4.67 PSDD51 pKa = 4.41 EE52 pKa = 3.93 IFKK55 pKa = 10.94 AVLHH59 pKa = 6.88 DD60 pKa = 3.95 EE61 pKa = 4.59 VKK63 pKa = 10.53 VDD65 pKa = 3.63 PAGQVDD71 pKa = 3.96 TSYY74 pKa = 11.45 LRR76 pKa = 11.84 VVSDD80 pKa = 3.76 GCPISKK86 pKa = 9.48 LQHH89 pKa = 6.72 DD90 pKa = 5.5 GEE92 pKa = 4.68 QIHH95 pKa = 7.03 PPTSNKK101 pKa = 9.85 VGGKK105 pKa = 10.04 VSVKK109 pKa = 10.28 RR110 pKa = 11.84 NFGSRR115 pKa = 11.84 PSKK118 pKa = 10.7 DD119 pKa = 3.16 ATLLRR124 pKa = 11.84 ALVAAYY130 pKa = 8.75 PDD132 pKa = 3.72 KK133 pKa = 11.07 EE134 pKa = 4.32 YY135 pKa = 11.09 LCEE138 pKa = 4.05 VNQKK142 pKa = 9.21 VVYY145 pKa = 9.92 TSGTPKK151 pKa = 10.61 GFSTRR156 pKa = 11.84 LRR158 pKa = 11.84 EE159 pKa = 3.93 LTTRR163 pKa = 11.84 KK164 pKa = 9.87 CVGEE168 pKa = 4.43 GSATTIAKK176 pKa = 10.09 KK177 pKa = 10.52 LEE179 pKa = 4.0 KK180 pKa = 10.39 LLPTGALPDD189 pKa = 3.23 WHH191 pKa = 7.43 DD192 pKa = 3.18 IAGLFEE198 pKa = 4.66 IMHH201 pKa = 5.97 TTQSAGAGAPYY212 pKa = 9.41 WVSKK216 pKa = 11.34 AEE218 pKa = 3.85 AALPMMEE225 pKa = 4.82 TILPLVIKK233 pKa = 10.21 ALEE236 pKa = 4.36 AGEE239 pKa = 3.86 ITQFMKK245 pKa = 10.7 EE246 pKa = 4.01 NPEE249 pKa = 4.15 LFLSEE254 pKa = 4.5 VKK256 pKa = 10.87 NKK258 pKa = 7.83 TDD260 pKa = 3.09 RR261 pKa = 11.84 YY262 pKa = 8.3 EE263 pKa = 4.01 TAKK266 pKa = 10.77 LDD268 pKa = 4.05 DD269 pKa = 3.61 KK270 pKa = 11.2 VRR272 pKa = 11.84 PYY274 pKa = 10.94 VSQPFHH280 pKa = 6.55 FSALFSAILQPFCGSLKK297 pKa = 9.47 TWDD300 pKa = 3.93 SQEE303 pKa = 4.09 STMNAYY309 pKa = 8.82 GWSMANGGIEE319 pKa = 4.48 RR320 pKa = 11.84 IYY322 pKa = 10.83 QRR324 pKa = 11.84 VAHH327 pKa = 5.51 LQEE330 pKa = 4.24 RR331 pKa = 11.84 TSEE334 pKa = 3.81 DD335 pKa = 2.68 RR336 pKa = 11.84 KK337 pKa = 10.26 IRR339 pKa = 11.84 FKK341 pKa = 10.76 IGLYY345 pKa = 10.78 GDD347 pKa = 3.66 DD348 pKa = 3.93 AKK350 pKa = 11.38 LFFINRR356 pKa = 11.84 DD357 pKa = 3.34 AEE359 pKa = 4.65 VYY361 pKa = 10.66 AVDD364 pKa = 3.57 PDD366 pKa = 3.71 FRR368 pKa = 11.84 QMDD371 pKa = 4.06 GSVDD375 pKa = 3.13 RR376 pKa = 11.84 HH377 pKa = 4.61 TVEE380 pKa = 6.58 GVAKK384 pKa = 9.13 WISRR388 pKa = 11.84 AYY390 pKa = 8.86 TEE392 pKa = 4.08 QHH394 pKa = 6.13 GEE396 pKa = 4.06 SPFWDD401 pKa = 3.41 NVLKK405 pKa = 11.17 LMVEE409 pKa = 4.79 FATDD413 pKa = 3.21 PTFVVNGTTVYY424 pKa = 10.66 KK425 pKa = 10.54 KK426 pKa = 9.56 PQKK429 pKa = 10.49 DD430 pKa = 3.88 GILSGVVGTTLFDD443 pKa = 3.63 TAKK446 pKa = 10.41 SALAYY451 pKa = 10.49 SHH453 pKa = 6.99 LLDD456 pKa = 4.03 EE457 pKa = 5.6 FKK459 pKa = 10.55 IEE461 pKa = 4.13 PKK463 pKa = 10.33 LFHH466 pKa = 6.77 DD467 pKa = 4.85 AKK469 pKa = 10.67 RR470 pKa = 11.84 VTKK473 pKa = 10.18 FLKK476 pKa = 10.24 DD477 pKa = 3.15 KK478 pKa = 10.68 HH479 pKa = 6.34 GLVVKK484 pKa = 10.36 EE485 pKa = 4.37 GTWTPEE491 pKa = 3.91 KK492 pKa = 10.77 LSMEE496 pKa = 4.45 PEE498 pKa = 4.36 HH499 pKa = 7.52 GEE501 pKa = 3.78 LWTKK505 pKa = 10.97 NKK507 pKa = 9.81 FLGMSFMWYY516 pKa = 10.11 HH517 pKa = 7.37 DD518 pKa = 4.21 DD519 pKa = 4.15 QVGAPTLVPYY529 pKa = 10.87 LSDD532 pKa = 4.4 DD533 pKa = 3.46 DD534 pKa = 4.13 WVNMILHH541 pKa = 6.34 PRR543 pKa = 11.84 EE544 pKa = 4.34 SITGKK549 pKa = 10.76 KK550 pKa = 10.31 LGDD553 pKa = 3.48 LAKK556 pKa = 10.44 QRR558 pKa = 11.84 ISFDD562 pKa = 3.14 RR563 pKa = 11.84 ARR565 pKa = 11.84 GYY567 pKa = 10.92 LITGAAFNPQIADD580 pKa = 4.07 LLYY583 pKa = 10.69 KK584 pKa = 10.72 AIDD587 pKa = 4.14 LVPATAILMAVAAGGGKK604 pKa = 10.15 GEE606 pKa = 4.56 SPGEE610 pKa = 3.89 HH611 pKa = 6.07 QIVGDD616 pKa = 3.89 SFLFPSSEE624 pKa = 4.15 GVPSVSWCAQLYY636 pKa = 10.8 AGVEE640 pKa = 4.22 NKK642 pKa = 9.74 TGWQLVYY649 pKa = 8.57 PTIDD653 pKa = 3.15 AKK655 pKa = 10.99 LQNTRR660 pKa = 11.84 TSWKK664 pKa = 9.25 SRR666 pKa = 11.84 LRR668 pKa = 11.84 NSVKK672 pKa = 10.19 EE673 pKa = 3.75 ISYY676 pKa = 11.06 APLASEE682 pKa = 4.42 IPSVLQAVFEE692 pKa = 4.52 PPPQVEE698 pKa = 4.11 VAAATNFSKK707 pKa = 10.85 RR708 pKa = 11.84 FVNRR712 pKa = 11.84 VDD714 pKa = 3.28 IVLAPTQKK722 pKa = 10.68 ADD724 pKa = 3.15 KK725 pKa = 8.71 LQPVAEE731 pKa = 4.16 YY732 pKa = 10.3 LQAVVSKK739 pKa = 8.52 TGPMMEE745 pKa = 4.45 AQLASKK751 pKa = 10.16 IGRR754 pKa = 11.84 PVPKK758 pKa = 9.4 EE759 pKa = 3.74 LKK761 pKa = 10.08 RR762 pKa = 11.84 VTFDD766 pKa = 3.2 APTLRR771 pKa = 11.84 SVVVDD776 pKa = 4.25 TPPSLVSKK784 pKa = 9.41 SHH786 pKa = 5.63 VSAKK790 pKa = 10.44 VLLALKK796 pKa = 7.16 TFPMTKK802 pKa = 9.56 PYY804 pKa = 8.72 PTIEE808 pKa = 4.09 WLNILASVSQRR819 pKa = 11.84 KK820 pKa = 8.49 LVVKK824 pKa = 7.37 TTVTDD829 pKa = 3.24 TLTNYY834 pKa = 9.84 KK835 pKa = 9.91 RR836 pKa = 11.84 VAFFLNEE843 pKa = 3.99 EE844 pKa = 3.97 VDD846 pKa = 3.47 KK847 pKa = 11.26 HH848 pKa = 5.3 VLGFIEE854 pKa = 4.74 GLQPAKK860 pKa = 10.24 DD861 pKa = 3.78 LKK863 pKa = 10.92 QMFVEE868 pKa = 5.11 RR869 pKa = 11.84 VYY871 pKa = 11.14 GMCYY875 pKa = 10.0 ALHH878 pKa = 5.5 EE879 pKa = 4.87 HH880 pKa = 6.13 GVKK883 pKa = 10.01 IFQVIGKK890 pKa = 9.0 KK891 pKa = 10.47 DD892 pKa = 3.77 PEE894 pKa = 3.93 AKK896 pKa = 9.35 IYY898 pKa = 10.37 KK899 pKa = 8.76 MPVVMHH905 pKa = 6.52 PEE907 pKa = 3.84 EE908 pKa = 4.24 TQEE911 pKa = 4.38 FDD913 pKa = 5.47 AILKK917 pKa = 10.08 NLTASAHH924 pKa = 5.68 GDD926 pKa = 2.94 TWAFIADD933 pKa = 3.35 ADD935 pKa = 3.91 ARR937 pKa = 11.84 EE938 pKa = 4.16 IQPDD942 pKa = 3.62 TTDD945 pKa = 3.14 AEE947 pKa = 3.99 IRR949 pKa = 11.84 EE950 pKa = 4.15 ISNQLEE956 pKa = 4.14 YY957 pKa = 11.09 AKK959 pKa = 10.57 RR960 pKa = 11.84 LVGNLQTTLEE970 pKa = 4.09 KK971 pKa = 10.66 LIEE974 pKa = 4.2 RR975 pKa = 11.84 KK976 pKa = 9.67 YY977 pKa = 11.13 GKK979 pKa = 8.68 QQQKK983 pKa = 10.57 EE984 pKa = 4.38 SGSKK988 pKa = 10.71 AKK990 pKa = 10.2 DD991 pKa = 3.23 APKK994 pKa = 10.24 RR995 pKa = 11.84 PQKK998 pKa = 10.78 AKK1000 pKa = 10.17 QQQQQQQNKK1009 pKa = 9.48 LYY1011 pKa = 9.83 IYY1013 pKa = 9.8 PDD1015 pKa = 3.23 IPNPSLLRR1023 pKa = 11.84 EE1024 pKa = 4.26 CSLEE1028 pKa = 3.85 FHH1030 pKa = 7.02
Molecular weight: 115.25 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.893
IPC2_protein 7.322
IPC_protein 7.263
Toseland 7.322
ProMoST 7.746
Dawson 8.009
Bjellqvist 8.112
Wikipedia 7.951
Rodwell 8.039
Grimsley 7.439
Solomon 8.068
Lehninger 8.068
Nozaki 8.258
DTASelect 8.053
Thurlkill 8.141
EMBOSS 8.244
Sillero 8.346
Patrickios 4.596
IPC_peptide 8.068
IPC2_peptide 7.117
IPC2.peptide.svr19 7.398
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
1
0
1
1030
1030
1030
1030.0
115.25
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.35 ± 0.0
0.68 ± 0.0
5.825 ± 0.0
6.408 ± 0.0
4.078 ± 0.0
5.728 ± 0.0
2.427 ± 0.0
4.466 ± 0.0
8.252 ± 0.0
8.932 ± 0.0
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.33 ± 0.0
2.718 ± 0.0
5.825 ± 0.0
4.757 ± 0.0
4.272 ± 0.0
6.408 ± 0.0
6.311 ± 0.0
7.67 ± 0.0
1.456 ± 0.0
3.107 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here