Beihai blue swimmer crab virus 3

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KFC4|A0A1L3KFC4_9VIRU Uncharacterized protein OS=Beihai blue swimmer crab virus 3 OX=1922370 PE=4 SV=1
MM1 pKa = 7.01SHH3 pKa = 6.61TYY5 pKa = 10.27SVEE8 pKa = 4.0HH9 pKa = 6.7EE10 pKa = 4.61SKK12 pKa = 10.97CGGKK16 pKa = 10.36LYY18 pKa = 10.39TGTVDD23 pKa = 3.48GSVEE27 pKa = 3.94FSVVGLGKK35 pKa = 10.69GDD37 pKa = 4.53FSMQLQTRR45 pKa = 11.84PSEE48 pKa = 3.95EE49 pKa = 3.88DD50 pKa = 3.21LKK52 pKa = 11.34RR53 pKa = 11.84EE54 pKa = 3.79AARR57 pKa = 11.84RR58 pKa = 11.84EE59 pKa = 3.83LVKK62 pKa = 10.58QKK64 pKa = 10.77KK65 pKa = 8.22EE66 pKa = 3.94KK67 pKa = 10.19KK68 pKa = 8.91DD69 pKa = 3.59NKK71 pKa = 7.71STRR74 pKa = 11.84VEE76 pKa = 4.21KK77 pKa = 10.71LGHH80 pKa = 5.87ALKK83 pKa = 10.33HH84 pKa = 5.75LSVSKK89 pKa = 10.55QDD91 pKa = 3.89EE92 pKa = 4.41NSSSSSLPHH101 pKa = 5.53MRR103 pKa = 11.84AVMSEE108 pKa = 4.14LTPLEE113 pKa = 4.14PSLVQVCKK121 pKa = 10.38VSQHH125 pKa = 5.74RR126 pKa = 11.84FMGFLDD132 pKa = 3.92GLNAEE137 pKa = 5.43LIDD140 pKa = 4.2SSGAFNSDD148 pKa = 3.27LLGEE152 pKa = 4.33QLRR155 pKa = 11.84KK156 pKa = 10.15LPGYY160 pKa = 9.74NKK162 pKa = 9.51RR163 pKa = 11.84DD164 pKa = 3.69YY165 pKa = 11.66DD166 pKa = 5.34DD167 pKa = 3.62MQVWLAAVDD176 pKa = 3.61KK177 pKa = 10.95CQGEE181 pKa = 4.17SHH183 pKa = 6.88ARR185 pKa = 11.84LLYY188 pKa = 11.24NMACSITRR196 pKa = 11.84AQLVQNSTLYY206 pKa = 10.2NSEE209 pKa = 3.87RR210 pKa = 11.84RR211 pKa = 11.84TGSVLGYY218 pKa = 7.44THH220 pKa = 7.38FDD222 pKa = 2.87SHH224 pKa = 6.8TISSQYY230 pKa = 9.58EE231 pKa = 3.99HH232 pKa = 7.13GPGLVEE238 pKa = 4.02VNMYY242 pKa = 11.21ADD244 pKa = 3.81VSRR247 pKa = 11.84PATVTVVDD255 pKa = 3.73RR256 pKa = 11.84DD257 pKa = 3.81SFRR260 pKa = 11.84GEE262 pKa = 4.36HH263 pKa = 6.18VSHH266 pKa = 6.52LHH268 pKa = 6.41IPNKK272 pKa = 7.2TAKK275 pKa = 10.28QIAFVLGHH283 pKa = 5.47SGKK286 pKa = 10.36RR287 pKa = 11.84EE288 pKa = 4.05VKK290 pKa = 10.22DD291 pKa = 3.18SAFNFEE297 pKa = 5.24FGIPDD302 pKa = 4.06LGVKK306 pKa = 9.45NVSYY310 pKa = 10.04TDD312 pKa = 3.38KK313 pKa = 11.36VEE315 pKa = 4.28PDD317 pKa = 2.98QVLDD321 pKa = 3.72YY322 pKa = 10.44FVQDD326 pKa = 3.5TLALDD331 pKa = 3.79LSRR334 pKa = 11.84YY335 pKa = 9.96SIAEE339 pKa = 3.76MTAALQVYY347 pKa = 8.44IKK349 pKa = 10.7SMRR352 pKa = 11.84LEE354 pKa = 3.93AEE356 pKa = 4.09YY357 pKa = 10.93LVVCEE362 pKa = 4.24VMNLSGFFPLPDD374 pKa = 3.56TRR376 pKa = 11.84EE377 pKa = 4.27GTWWSRR383 pKa = 11.84FRR385 pKa = 11.84VQVCLPEE392 pKa = 4.28FFSLRR397 pKa = 11.84SAHH400 pKa = 6.16PMMVEE405 pKa = 4.09GSPYY409 pKa = 9.51TIEE412 pKa = 5.07KK413 pKa = 9.95IGAHH417 pKa = 5.06TTSISQQNSYY427 pKa = 10.86RR428 pKa = 11.84SMIDD432 pKa = 3.3YY433 pKa = 11.08AVMNYY438 pKa = 10.31RR439 pKa = 11.84IMLGVYY445 pKa = 8.6EE446 pKa = 4.23KK447 pKa = 10.73VRR449 pKa = 11.84RR450 pKa = 11.84VAEE453 pKa = 5.08GIDD456 pKa = 3.55SFGPDD461 pKa = 3.15SAAHH465 pKa = 5.96DD466 pKa = 3.79VPYY469 pKa = 10.47EE470 pKa = 3.89YY471 pKa = 11.13LSVFEE476 pKa = 4.23STEE479 pKa = 4.11LEE481 pKa = 4.24SGLVPGYY488 pKa = 9.96GVNYY492 pKa = 9.44NAEE495 pKa = 4.33EE496 pKa = 4.15IARR499 pKa = 11.84AYY501 pKa = 10.8ADD503 pKa = 3.75GDD505 pKa = 3.63VKK507 pKa = 11.05YY508 pKa = 10.39YY509 pKa = 10.8YY510 pKa = 10.82YY511 pKa = 10.16EE512 pKa = 4.34TDD514 pKa = 3.45PDD516 pKa = 3.73SYY518 pKa = 10.89AAHH521 pKa = 6.33MKK523 pKa = 11.02DD524 pKa = 3.43NDD526 pKa = 3.55VLPAHH531 pKa = 6.97KK532 pKa = 10.92GEE534 pKa = 4.25LCAGNTTSVPPPTSLVPLYY553 pKa = 9.5GACPAEE559 pKa = 3.95LLAYY563 pKa = 10.2QYY565 pKa = 10.61MNGGRR570 pKa = 11.84IEE572 pKa = 5.58AFDD575 pKa = 3.66QSKK578 pKa = 10.2GAAEE582 pKa = 3.97YY583 pKa = 10.36FSYY586 pKa = 11.18QEE588 pKa = 3.99MMLVANFLRR597 pKa = 11.84LNRR600 pKa = 11.84TDD602 pKa = 3.6STWQEE607 pKa = 3.96VQRR610 pKa = 11.84GCDD613 pKa = 3.21TEE615 pKa = 4.63VFTGAMSKK623 pKa = 8.53VTHH626 pKa = 6.45APFYY630 pKa = 10.64YY631 pKa = 9.96DD632 pKa = 4.83DD633 pKa = 5.11PMVQYY638 pKa = 11.22LNTSTRR644 pKa = 11.84KK645 pKa = 9.33RR646 pKa = 11.84DD647 pKa = 3.59PEE649 pKa = 4.12SRR651 pKa = 11.84SCGPGYY657 pKa = 10.56QSICTYY663 pKa = 10.14GLQVAYY669 pKa = 10.03RR670 pKa = 11.84ALWSGVKK677 pKa = 9.64SYY679 pKa = 11.3RR680 pKa = 11.84RR681 pKa = 11.84FTVSYY686 pKa = 9.8RR687 pKa = 11.84GVRR690 pKa = 11.84ANRR693 pKa = 11.84RR694 pKa = 11.84SRR696 pKa = 11.84PLEE699 pKa = 3.8FKK701 pKa = 10.57VAGSATYY708 pKa = 10.21HH709 pKa = 6.37KK710 pKa = 10.21FVGGAPLTSPEE721 pKa = 3.86QDD723 pKa = 3.15HH724 pKa = 6.76LGEE727 pKa = 4.76SNFHH731 pKa = 6.39KK732 pKa = 10.37VQKK735 pKa = 9.97AAPAVGPSTIVHH747 pKa = 5.54NTASTQDD754 pKa = 3.16TGDD757 pKa = 3.13QHH759 pKa = 7.42AAEE762 pKa = 4.89ISQDD766 pKa = 3.81LPEE769 pKa = 4.07QTPPVEE775 pKa = 4.24EE776 pKa = 4.74GGSGKK781 pKa = 8.57QQ782 pKa = 3.14

Molecular weight:
87.33 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KFC4|A0A1L3KFC4_9VIRU Uncharacterized protein OS=Beihai blue swimmer crab virus 3 OX=1922370 PE=4 SV=1
MM1 pKa = 6.9MAVTGTIEE9 pKa = 4.04YY10 pKa = 9.75VEE12 pKa = 5.0KK13 pKa = 10.46YY14 pKa = 9.61LHH16 pKa = 6.12YY17 pKa = 9.46NQIVAGDD24 pKa = 3.89CSGMFLATLEE34 pKa = 4.01YY35 pKa = 10.07EE36 pKa = 4.27RR37 pKa = 11.84RR38 pKa = 11.84VLSALVLRR46 pKa = 11.84NVHH49 pKa = 6.06TNTASLYY56 pKa = 10.48LRR58 pKa = 11.84ADD60 pKa = 3.86YY61 pKa = 10.58KK62 pKa = 11.28YY63 pKa = 9.83GAYY66 pKa = 9.12WPFFKK71 pKa = 10.6QVVSTNMCVNTSRR84 pKa = 11.84AAVYY88 pKa = 10.04GVDD91 pKa = 3.36YY92 pKa = 10.61SAPFRR97 pKa = 11.84HH98 pKa = 6.15LASSSKK104 pKa = 10.32VKK106 pKa = 10.31QSRR109 pKa = 11.84KK110 pKa = 10.38DD111 pKa = 3.41IILLTTSEE119 pKa = 3.9QVAYY123 pKa = 10.82LEE125 pKa = 4.12EE126 pKa = 4.31LPRR129 pKa = 11.84AKK131 pKa = 10.02ISADD135 pKa = 3.15HH136 pKa = 6.95HH137 pKa = 5.85IHH139 pKa = 6.44YY140 pKa = 10.44SAIDD144 pKa = 3.14SWNVLKK150 pKa = 10.97EE151 pKa = 3.76KK152 pKa = 10.87DD153 pKa = 3.37RR154 pKa = 11.84DD155 pKa = 3.63LATSLVSLLSRR166 pKa = 11.84QKK168 pKa = 9.35GWTMTGISGVLGYY181 pKa = 10.66AALLGKK187 pKa = 10.38CCAFRR192 pKa = 11.84LHH194 pKa = 6.59SRR196 pKa = 11.84DD197 pKa = 3.1FFTPGSSMNEE207 pKa = 3.16WYY209 pKa = 10.34GFHH212 pKa = 7.45KK213 pKa = 10.3ATSTNYY219 pKa = 10.17KK220 pKa = 7.89MHH222 pKa = 6.93ANIMNYY228 pKa = 9.56RR229 pKa = 11.84LEE231 pKa = 3.95EE232 pKa = 4.36LYY234 pKa = 10.7EE235 pKa = 4.14VEE237 pKa = 4.3VLVNRR242 pKa = 11.84LDD244 pKa = 5.79LGMDD248 pKa = 3.07WDD250 pKa = 3.82KK251 pKa = 11.44EE252 pKa = 4.47YY253 pKa = 11.69VNRR256 pKa = 11.84TTMNLTRR263 pKa = 11.84LQDD266 pKa = 3.54AQVYY270 pKa = 9.12KK271 pKa = 10.45AASWLFRR278 pKa = 11.84TARR281 pKa = 11.84ASGKK285 pKa = 10.12RR286 pKa = 11.84PNKK289 pKa = 9.5QNWNKK294 pKa = 9.24FWSKK298 pKa = 8.87RR299 pKa = 11.84WEE301 pKa = 3.93WSTTGATNYY310 pKa = 8.43PYY312 pKa = 10.44PNDD315 pKa = 3.47FQYY318 pKa = 10.58PAWYY322 pKa = 9.98AKK324 pKa = 10.35NKK326 pKa = 9.57FMTYY330 pKa = 9.86LQMRR334 pKa = 11.84SGLEE338 pKa = 4.01LNEE341 pKa = 4.01LAAMPARR348 pKa = 11.84ITAKK352 pKa = 10.41PSIKK356 pKa = 10.57YY357 pKa = 9.06EE358 pKa = 3.8WGKK361 pKa = 8.07TRR363 pKa = 11.84AIYY366 pKa = 10.46GCDD369 pKa = 3.97DD370 pKa = 3.43ISHH373 pKa = 6.9LVYY376 pKa = 10.52TFVLGSPEE384 pKa = 4.1EE385 pKa = 4.55LLPSWIPLGASSKK398 pKa = 11.1DD399 pKa = 3.53EE400 pKa = 4.11YY401 pKa = 11.38VHH403 pKa = 6.67NLLNQVSSKK412 pKa = 10.82GYY414 pKa = 8.83SLCLDD419 pKa = 3.74FEE421 pKa = 5.24DD422 pKa = 5.84FNSQHH427 pKa = 6.48SSGNMRR433 pKa = 11.84AVLEE437 pKa = 4.28AFFDD441 pKa = 4.23VYY443 pKa = 11.34SQDD446 pKa = 3.78LTDD449 pKa = 4.61DD450 pKa = 3.61QLKK453 pKa = 9.82LRR455 pKa = 11.84RR456 pKa = 11.84WVLDD460 pKa = 3.42SVLNQYY466 pKa = 9.54VMPGSGNTHH475 pKa = 7.29AYY477 pKa = 7.75RR478 pKa = 11.84TEE480 pKa = 3.89GTLFSGWRR488 pKa = 11.84LTTFMNTVMNYY499 pKa = 10.12CYY501 pKa = 8.88TQCLVEE507 pKa = 4.9DD508 pKa = 4.56SGAKK512 pKa = 10.04SYY514 pKa = 8.47GTLHH518 pKa = 6.69SGDD521 pKa = 4.18DD522 pKa = 3.57VFMSVMEE529 pKa = 4.47PNDD532 pKa = 4.03YY533 pKa = 11.0IRR535 pKa = 11.84MQFSAEE541 pKa = 3.46RR542 pKa = 11.84WNIRR546 pKa = 11.84LSLQKK551 pKa = 10.85CFMTSIKK558 pKa = 10.5EE559 pKa = 4.13FLRR562 pKa = 11.84KK563 pKa = 9.49DD564 pKa = 3.6HH565 pKa = 5.2QHH567 pKa = 6.44KK568 pKa = 10.89AGAQYY573 pKa = 10.76LARR576 pKa = 11.84GVSTLVHH583 pKa = 6.1GRR585 pKa = 11.84TEE587 pKa = 4.52SVQHH591 pKa = 6.2SDD593 pKa = 3.96IIEE596 pKa = 4.01LLKK599 pKa = 11.2ANEE602 pKa = 4.01TRR604 pKa = 11.84LEE606 pKa = 4.23EE607 pKa = 3.95IVNRR611 pKa = 11.84EE612 pKa = 3.85GSPKK616 pKa = 10.3VVDD619 pKa = 4.0HH620 pKa = 6.26FRR622 pKa = 11.84KK623 pKa = 9.93IYY625 pKa = 9.43LARR628 pKa = 11.84IKK630 pKa = 10.28RR631 pKa = 11.84DD632 pKa = 3.78PIYY635 pKa = 10.78EE636 pKa = 4.78GITDD640 pKa = 3.59EE641 pKa = 4.81EE642 pKa = 3.76IRR644 pKa = 11.84AIYY647 pKa = 9.07EE648 pKa = 3.53LHH650 pKa = 6.51PVNKK654 pKa = 8.82GMNMAAEE661 pKa = 4.2AKK663 pKa = 10.37GYY665 pKa = 10.15GLQLVSRR672 pKa = 11.84RR673 pKa = 11.84KK674 pKa = 8.39HH675 pKa = 4.3TLEE678 pKa = 5.32GYY680 pKa = 9.84DD681 pKa = 3.52LPGVRR686 pKa = 11.84DD687 pKa = 3.67YY688 pKa = 11.76VHH690 pKa = 6.79EE691 pKa = 4.29LKK693 pKa = 10.64KK694 pKa = 10.63YY695 pKa = 10.78LKK697 pKa = 9.08DD698 pKa = 3.47TKK700 pKa = 10.4HH701 pKa = 5.67VKK703 pKa = 9.46QLSRR707 pKa = 11.84SIWNATEE714 pKa = 3.92RR715 pKa = 11.84VIFSTVTRR723 pKa = 11.84VSGFIEE729 pKa = 3.7MDD731 pKa = 3.34LAEE734 pKa = 4.28RR735 pKa = 11.84RR736 pKa = 11.84VMKK739 pKa = 10.29SLYY742 pKa = 10.15KK743 pKa = 10.55LYY745 pKa = 10.84SRR747 pKa = 11.84YY748 pKa = 9.88KK749 pKa = 10.62ADD751 pKa = 2.67IHH753 pKa = 6.56YY754 pKa = 8.67GKK756 pKa = 10.27CRR758 pKa = 11.84LVGMDD763 pKa = 3.34VVSRR767 pKa = 11.84DD768 pKa = 3.17LSEE771 pKa = 4.83SIRR774 pKa = 11.84HH775 pKa = 4.65VDD777 pKa = 3.26IVIGDD782 pKa = 3.66KK783 pKa = 10.61PNYY786 pKa = 9.31YY787 pKa = 9.68EE788 pKa = 4.24WLSILII794 pKa = 4.35

Molecular weight:
91.78 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1576

782

794

788.0

89.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.853 ± 0.221

1.332 ± 0.053

5.457 ± 0.121

6.345 ± 0.401

3.426 ± 0.11

6.282 ± 0.629

3.173 ± 0.017

3.426 ± 0.713

5.52 ± 0.473

8.693 ± 0.73

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.046 ± 0.166

3.934 ± 0.436

3.617 ± 0.797

3.617 ± 0.523

6.028 ± 0.379

8.82 ± 0.46

5.584 ± 0.061

7.487 ± 0.498

1.459 ± 0.587

5.901 ± 0.288

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski