Blautia hydrogenotrophica CAG:147
Average proteome isoelectric point is 6.2
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3087 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|R5C6G8|R5C6G8_9FIRM ABC transporter domain-containing protein OS=Blautia hydrogenotrophica CAG:147 OX=1263061 GN=BN499_00718 PE=3 SV=1
MM1 pKa = 7.63 KK2 pKa = 10.66 SNLEE6 pKa = 3.96 QEE8 pKa = 4.57 LQRR11 pKa = 11.84 QLRR14 pKa = 11.84 QEE16 pKa = 3.94 IEE18 pKa = 3.9 IPEE21 pKa = 4.64 CIQKK25 pKa = 10.33 KK26 pKa = 10.07 SKK28 pKa = 9.68 QAYY31 pKa = 9.45 LKK33 pKa = 10.18 IKK35 pKa = 9.96 SGQIRR40 pKa = 11.84 QEE42 pKa = 4.16 EE43 pKa = 4.56 VLKK46 pKa = 10.24 TPLGWMKK53 pKa = 9.54 KK54 pKa = 6.47 TAIALGSVAAALLLCMVLFLTNPVMAQDD82 pKa = 4.26 FPVIGNLFSLLQDD95 pKa = 4.01 KK96 pKa = 10.86 ISFFGNFEE104 pKa = 4.67 DD105 pKa = 4.66 YY106 pKa = 8.43 ATPLVPEE113 pKa = 4.68 EE114 pKa = 4.28 DD115 pKa = 3.46 TSFSKK120 pKa = 10.32 DD121 pKa = 3.13 TDD123 pKa = 3.45 SSGIFSKK130 pKa = 9.96 TEE132 pKa = 4.05 DD133 pKa = 3.83 GLTITLSEE141 pKa = 4.69 VYY143 pKa = 10.8 ANTQAIYY150 pKa = 8.95 LTVLMEE156 pKa = 4.27 SEE158 pKa = 4.24 EE159 pKa = 4.4 AFPSTLIDD167 pKa = 3.58 QQDD170 pKa = 3.6 QPVLSLIASEE180 pKa = 5.27 NYY182 pKa = 10.17 DD183 pKa = 3.74 FNPTPEE189 pKa = 4.46 EE190 pKa = 4.19 YY191 pKa = 10.93 NNPIYY196 pKa = 10.28 FNPEE200 pKa = 3.44 GQFLDD205 pKa = 4.62 DD206 pKa = 3.73 YY207 pKa = 10.42 TYY209 pKa = 11.53 SCILRR214 pKa = 11.84 LDD216 pKa = 3.64 LRR218 pKa = 11.84 EE219 pKa = 4.3 ASLDD223 pKa = 3.34 RR224 pKa = 11.84 QAYY227 pKa = 8.01 NEE229 pKa = 3.97 AMIQAEE235 pKa = 4.27 AAAQEE240 pKa = 3.95 TDD242 pKa = 4.19 AVINYY247 pKa = 9.11 QNLQSFVEE255 pKa = 4.31 IPEE258 pKa = 4.18 QIHH261 pKa = 7.19 LDD263 pKa = 3.7 FQIQQVIGTLEE274 pKa = 4.01 DD275 pKa = 3.16 AQYY278 pKa = 10.21 WDD280 pKa = 2.86 SGYY283 pKa = 9.16 TEE285 pKa = 4.69 EE286 pKa = 5.27 EE287 pKa = 4.06 LTAMTDD293 pKa = 3.4 EE294 pKa = 4.64 EE295 pKa = 4.35 FQEE298 pKa = 4.49 VMKK301 pKa = 10.67 QMPEE305 pKa = 4.03 EE306 pKa = 4.31 YY307 pKa = 9.64 NQHH310 pKa = 6.0 PNQYY314 pKa = 9.25 EE315 pKa = 4.24 NYY317 pKa = 8.58 WFDD320 pKa = 4.03 GPWDD324 pKa = 4.07 FSLDD328 pKa = 3.61 LTVDD332 pKa = 3.63 SSRR335 pKa = 11.84 VQTIEE340 pKa = 3.51 INEE343 pKa = 3.95 INEE346 pKa = 4.08 NGVGISNVILTPYY359 pKa = 10.13 EE360 pKa = 3.95 LTVNDD365 pKa = 4.78 AYY367 pKa = 10.99 ADD369 pKa = 3.68 GVPFYY374 pKa = 11.01 DD375 pKa = 3.85 YY376 pKa = 11.31 FLVALDD382 pKa = 3.9 ANGNKK387 pKa = 9.97 LPYY390 pKa = 9.87 NDD392 pKa = 4.95 SNGNCNYY399 pKa = 8.66 FTIQDD404 pKa = 3.71 RR405 pKa = 11.84 DD406 pKa = 3.24 ISTVDD411 pKa = 4.7 LYY413 pKa = 10.9 ILDD416 pKa = 3.61 YY417 pKa = 10.37 TEE419 pKa = 5.77 YY420 pKa = 9.57 MDD422 pKa = 4.15 EE423 pKa = 4.88 LKK425 pKa = 11.23 GEE427 pKa = 4.06 EE428 pKa = 4.07 NYY430 pKa = 11.13 NNNEE434 pKa = 4.05 NKK436 pKa = 10.1 PEE438 pKa = 3.95 EE439 pKa = 4.6 EE440 pKa = 3.97 KK441 pKa = 10.64 WSTLLDD447 pKa = 3.76 DD448 pKa = 3.7 RR449 pKa = 11.84 CFYY452 pKa = 10.13 HH453 pKa = 5.69 TTLNLTPVEE462 pKa = 4.17
Molecular weight: 53.14 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.771
IPC2_protein 3.897
IPC_protein 3.897
Toseland 3.694
ProMoST 4.012
Dawson 3.846
Bjellqvist 4.024
Wikipedia 3.732
Rodwell 3.719
Grimsley 3.605
Solomon 3.846
Lehninger 3.808
Nozaki 3.961
DTASelect 4.126
Thurlkill 3.719
EMBOSS 3.757
Sillero 3.999
Patrickios 0.769
IPC_peptide 3.846
IPC2_peptide 3.986
IPC2.peptide.svr19 3.903
Protein with the highest isoelectric point:
>tr|R5C5M1|R5C5M1_9FIRM Uncharacterized protein OS=Blautia hydrogenotrophica CAG:147 OX=1263061 GN=BN499_02185 PE=4 SV=1
MM1 pKa = 7.67 KK2 pKa = 8.72 MTFQPKK8 pKa = 8.86 KK9 pKa = 8.2 RR10 pKa = 11.84 SRR12 pKa = 11.84 AKK14 pKa = 9.27 VHH16 pKa = 5.81 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MSTKK25 pKa = 10.15 GGRR28 pKa = 11.84 KK29 pKa = 8.69 VLAARR34 pKa = 11.84 RR35 pKa = 11.84 LKK37 pKa = 10.61 GRR39 pKa = 11.84 KK40 pKa = 8.87 KK41 pKa = 10.59 LSAA44 pKa = 3.95
Molecular weight: 5.06 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.494
IPC2_protein 11.125
IPC_protein 12.691
Toseland 12.866
ProMoST 13.349
Dawson 12.866
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.705
Grimsley 12.91
Solomon 13.349
Lehninger 13.247
Nozaki 12.866
DTASelect 12.852
Thurlkill 12.866
EMBOSS 13.364
Sillero 12.866
Patrickios 12.427
IPC_peptide 13.349
IPC2_peptide 12.34
IPC2.peptide.svr19 9.077
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3087
0
3087
947112
29
2797
306.8
34.39
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.315 ± 0.046
1.642 ± 0.019
5.117 ± 0.031
7.908 ± 0.05
4.018 ± 0.031
7.467 ± 0.043
1.717 ± 0.023
6.974 ± 0.038
6.578 ± 0.035
9.373 ± 0.056
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.088 ± 0.023
3.907 ± 0.025
3.391 ± 0.024
3.645 ± 0.03
4.741 ± 0.037
5.742 ± 0.03
5.173 ± 0.032
7.259 ± 0.036
0.933 ± 0.016
3.999 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here