Meles meles polyomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus

Average proteome isoelectric point is 6.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B5L789|A0A0B5L789_9POLY Small t antigen OS=Meles meles polyomavirus 1 OX=1608323 PE=4 SV=1
MM1 pKa = 7.5KK2 pKa = 9.06RR3 pKa = 11.84TLPKK7 pKa = 10.23RR8 pKa = 11.84SGSKK12 pKa = 9.97GAAPAQVPKK21 pKa = 10.83LLIKK25 pKa = 10.76GGIEE29 pKa = 3.68VLEE32 pKa = 4.23IRR34 pKa = 11.84TGADD38 pKa = 3.06SITTIEE44 pKa = 4.53LFLNPRR50 pKa = 11.84TGTPSEE56 pKa = 4.41HH57 pKa = 6.35EE58 pKa = 4.28FGYY61 pKa = 10.2SANITVATTDD71 pKa = 3.28TADD74 pKa = 3.37KK75 pKa = 10.59PKK77 pKa = 9.98IDD79 pKa = 4.29EE80 pKa = 4.67LPCFSVGKK88 pKa = 10.64VKK90 pKa = 10.86LPLLNDD96 pKa = 3.76DD97 pKa = 3.7MTGDD101 pKa = 4.67KK102 pKa = 10.6ILMWEE107 pKa = 4.06AVSCKK112 pKa = 10.06TEE114 pKa = 4.06VIGAGSLCNVHH125 pKa = 6.22SFRR128 pKa = 11.84KK129 pKa = 9.69RR130 pKa = 11.84VDD132 pKa = 3.19NGSYY136 pKa = 9.08TAAQPIVGLNYY147 pKa = 10.52HH148 pKa = 6.26MFAVGGEE155 pKa = 3.91PLQLQFLTEE164 pKa = 4.37NYY166 pKa = 6.05QTSYY170 pKa = 9.95KK171 pKa = 10.55DD172 pKa = 3.19SYY174 pKa = 10.88AAPKK178 pKa = 10.53VPLTGLAQVLDD189 pKa = 4.04PRR191 pKa = 11.84LKK193 pKa = 11.04GILDD197 pKa = 3.34KK198 pKa = 11.25DD199 pKa = 3.52GYY201 pKa = 11.08YY202 pKa = 9.8PVEE205 pKa = 4.4CWHH208 pKa = 7.34PDD210 pKa = 3.19PAKK213 pKa = 10.75NEE215 pKa = 3.62NSRR218 pKa = 11.84YY219 pKa = 9.33FGTYY223 pKa = 8.13TGGVQTPPVLQFSNSLTTILLDD245 pKa = 3.85EE246 pKa = 5.02NGVGPLCKK254 pKa = 10.05GDD256 pKa = 4.52NLFLSCCDD264 pKa = 3.36VVGFKK269 pKa = 10.89YY270 pKa = 10.74EE271 pKa = 3.83SGGTMKK277 pKa = 10.27FRR279 pKa = 11.84GLPRR283 pKa = 11.84YY284 pKa = 9.63FSVTLRR290 pKa = 11.84KK291 pKa = 9.58RR292 pKa = 11.84QVKK295 pKa = 9.74NPYY298 pKa = 9.5PVGTLLNSLFNKK310 pKa = 9.28LAPDD314 pKa = 3.58VDD316 pKa = 4.38SQPMTGEE323 pKa = 3.8HH324 pKa = 5.67SQVEE328 pKa = 4.56EE329 pKa = 3.78VRR331 pKa = 11.84VYY333 pKa = 10.74QGTEE337 pKa = 3.88VLPGDD342 pKa = 4.76PDD344 pKa = 3.42LQRR347 pKa = 11.84YY348 pKa = 7.81VDD350 pKa = 3.59QYY352 pKa = 9.61GQKK355 pKa = 8.01EE356 pKa = 4.36TRR358 pKa = 11.84PPQDD362 pKa = 2.97TEE364 pKa = 4.48RR365 pKa = 11.84NLLLEE370 pKa = 4.13INKK373 pKa = 9.86LKK375 pKa = 10.94ARR377 pKa = 11.84LQYY380 pKa = 10.48VRR382 pKa = 11.84QKK384 pKa = 10.89RR385 pKa = 11.84PDD387 pKa = 3.84PPQIMYY393 pKa = 9.4TPFPYY398 pKa = 10.09VEE400 pKa = 3.85RR401 pKa = 11.84NGRR404 pKa = 11.84HH405 pKa = 4.34VVIPTPDD412 pKa = 3.31GGLTGHH418 pKa = 6.94IEE420 pKa = 4.57GIIEE424 pKa = 4.03TEE426 pKa = 4.61EE427 pKa = 3.91ISEE430 pKa = 4.33APPPPSPSSAPLPPPTPTATPIVLPHH456 pKa = 6.15PTVEE460 pKa = 4.36LTGHH464 pKa = 6.88PVTEE468 pKa = 4.72EE469 pKa = 4.22DD470 pKa = 4.4NEE472 pKa = 4.54SPSDD476 pKa = 3.87GDD478 pKa = 3.67PSHH481 pKa = 6.74ATTSNVIEE489 pKa = 4.38FTMDD493 pKa = 3.02TASS496 pKa = 3.07

Molecular weight: 54.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B5L589|A0A0B5L589_9POLY Major capsid protein VP1 OS=Meles meles polyomavirus 1 OX=1608323 PE=3 SV=1
MM1 pKa = 7.65ALQVWMPQIDD11 pKa = 3.92YY12 pKa = 9.96LFPGFSTFARR22 pKa = 11.84YY23 pKa = 8.28AQYY26 pKa = 11.09LDD28 pKa = 3.68PFVWGPDD35 pKa = 3.78LINHH39 pKa = 5.86VSRR42 pKa = 11.84LFWQALLSEE51 pKa = 4.57GRR53 pKa = 11.84RR54 pKa = 11.84QIGYY58 pKa = 9.61AARR61 pKa = 11.84DD62 pKa = 3.43LQAASRR68 pKa = 11.84EE69 pKa = 4.25LATRR73 pKa = 11.84TATEE77 pKa = 3.85VAGTVQDD84 pKa = 3.44AVARR88 pKa = 11.84FFEE91 pKa = 4.22NTRR94 pKa = 11.84WAVSHH99 pKa = 5.25VTTPYY104 pKa = 10.96GALQNYY110 pKa = 7.67YY111 pKa = 10.27RR112 pKa = 11.84QLSPVNPPQLRR123 pKa = 11.84QLEE126 pKa = 4.16RR127 pKa = 11.84RR128 pKa = 11.84LTDD131 pKa = 2.81RR132 pKa = 11.84GVDD135 pKa = 3.07IRR137 pKa = 11.84QDD139 pKa = 3.6EE140 pKa = 4.52EE141 pKa = 3.8KK142 pKa = 9.89HH143 pKa = 5.75YY144 pKa = 10.8PSAEE148 pKa = 4.04YY149 pKa = 9.89IEE151 pKa = 5.61KK152 pKa = 10.68YY153 pKa = 9.68GAPGGAGQRR162 pKa = 11.84HH163 pKa = 5.43APDD166 pKa = 3.09WLLPLLLGLYY176 pKa = 10.72GDD178 pKa = 5.21LTPTWRR184 pKa = 11.84KK185 pKa = 9.5EE186 pKa = 3.46IEE188 pKa = 4.09EE189 pKa = 4.11QIEE192 pKa = 4.34SEE194 pKa = 4.41DD195 pKa = 5.26EE196 pKa = 3.68EE197 pKa = 4.47DD198 pKa = 3.67TPQKK202 pKa = 10.79KK203 pKa = 8.96RR204 pKa = 11.84VKK206 pKa = 10.1RR207 pKa = 11.84SRR209 pKa = 11.84PSPGAKK215 pKa = 9.03ATDD218 pKa = 3.53KK219 pKa = 10.56RR220 pKa = 11.84RR221 pKa = 11.84HH222 pKa = 5.5RR223 pKa = 11.84STRR226 pKa = 11.84NKK228 pKa = 9.82NRR230 pKa = 11.84SRR232 pKa = 3.54

Molecular weight: 26.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1936

178

681

387.2

43.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.457 ± 1.323

1.86 ± 0.664

5.579 ± 0.309

7.541 ± 0.408

3.667 ± 0.304

6.973 ± 0.381

1.86 ± 0.066

4.184 ± 0.293

5.992 ± 1.082

10.072 ± 0.543

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.014 ± 0.442

3.719 ± 0.44

6.147 ± 1.227

4.494 ± 0.348

5.888 ± 1.099

6.508 ± 0.353

6.147 ± 0.714

5.424 ± 0.526

1.601 ± 0.457

3.874 ± 0.166
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski