Torque teno midi virus 10

Taxonomy: Viruses; Anelloviridae; Gammatorquevirus

Average proteome isoelectric point is 7.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A7VLY8|A7VLY8_9VIRU Capsid protein OS=Torque teno midi virus 10 OX=2065051 PE=3 SV=1
MM1 pKa = 7.43SRR3 pKa = 11.84FYY5 pKa = 10.76TQTKK9 pKa = 10.01YY10 pKa = 11.1NGATLNQMWMSMIADD25 pKa = 3.69SHH27 pKa = 7.49DD28 pKa = 3.11IHH30 pKa = 7.35CDD32 pKa = 3.16CKK34 pKa = 11.08KK35 pKa = 10.52PFAHH39 pKa = 6.99LLDD42 pKa = 4.78NIFPEE47 pKa = 4.38GHH49 pKa = 5.69TDD51 pKa = 3.31RR52 pKa = 11.84NKK54 pKa = 9.94TVAHH58 pKa = 7.21IINRR62 pKa = 11.84DD63 pKa = 3.44YY64 pKa = 11.26KK65 pKa = 8.88EE66 pKa = 4.21CLSGGEE72 pKa = 4.43EE73 pKa = 4.25EE74 pKa = 5.44DD75 pKa = 4.74DD76 pKa = 3.87PGIPVGASAATAAGDD91 pKa = 3.78TEE93 pKa = 4.51IKK95 pKa = 10.71LEE97 pKa = 3.95EE98 pKa = 4.41HH99 pKa = 6.57LEE101 pKa = 3.96EE102 pKa = 4.73DD103 pKa = 3.45AEE105 pKa = 4.38EE106 pKa = 4.24IEE108 pKa = 4.52KK109 pKa = 10.96LLAAAEE115 pKa = 4.12EE116 pKa = 4.46NYY118 pKa = 9.97IRR120 pKa = 5.2

Molecular weight: 13.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A7VLY8|A7VLY8_9VIRU Capsid protein OS=Torque teno midi virus 10 OX=2065051 PE=3 SV=1
MM1 pKa = 7.33PFWWRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84PWYY13 pKa = 8.27TRR15 pKa = 11.84WGQRR19 pKa = 11.84RR20 pKa = 11.84YY21 pKa = 9.74RR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84YY26 pKa = 9.09RR27 pKa = 11.84NKK29 pKa = 8.86TRR31 pKa = 11.84RR32 pKa = 11.84TFGRR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84NRR42 pKa = 11.84KK43 pKa = 7.87APRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84RR50 pKa = 11.84KK51 pKa = 7.83LHH53 pKa = 4.89KK54 pKa = 10.07VRR56 pKa = 11.84RR57 pKa = 11.84KK58 pKa = 10.08KK59 pKa = 10.72KK60 pKa = 9.68FLKK63 pKa = 10.15LVQWQPDD70 pKa = 4.08RR71 pKa = 11.84IRR73 pKa = 11.84KK74 pKa = 7.59CTIKK78 pKa = 10.81GRR80 pKa = 11.84GTLVMGAHH88 pKa = 6.8GRR90 pKa = 11.84QMICFTNVKK99 pKa = 10.31DD100 pKa = 3.54RR101 pKa = 11.84LTPSRR106 pKa = 11.84APAGGGFGVEE116 pKa = 4.65RR117 pKa = 11.84ITLAHH122 pKa = 7.34LYY124 pKa = 9.98EE125 pKa = 4.18EE126 pKa = 4.33WKK128 pKa = 10.74ARR130 pKa = 11.84NNVWTATNEE139 pKa = 3.87NTDD142 pKa = 3.24LGRR145 pKa = 11.84YY146 pKa = 5.95TGCKK150 pKa = 8.51ISFYY154 pKa = 10.79RR155 pKa = 11.84HH156 pKa = 6.73LDD158 pKa = 2.84TDD160 pKa = 4.18FIIKK164 pKa = 10.13YY165 pKa = 9.96SRR167 pKa = 11.84NPPFNLEE174 pKa = 4.22KK175 pKa = 10.5YY176 pKa = 10.2SYY178 pKa = 10.41MYY180 pKa = 7.97MQPQEE185 pKa = 4.32LLLGKK190 pKa = 9.62HH191 pKa = 5.6KK192 pKa = 10.73RR193 pKa = 11.84ILLSKK198 pKa = 9.01KK199 pKa = 8.17TNPKK203 pKa = 10.32GKK205 pKa = 10.4LKK207 pKa = 8.36TTLKK211 pKa = 10.34IGPPKK216 pKa = 10.73LLTNKK221 pKa = 9.08WLLQSEE227 pKa = 4.56LAKK230 pKa = 10.26QDD232 pKa = 3.6LVEE235 pKa = 4.53ISAAAASFTYY245 pKa = 8.25PTIGCCNEE253 pKa = 3.28NRR255 pKa = 11.84ILNLYY260 pKa = 9.89SINTEE265 pKa = 4.27FYY267 pKa = 11.07KK268 pKa = 10.61DD269 pKa = 3.64AHH271 pKa = 6.15WMQAHH276 pKa = 7.31AGTNYY281 pKa = 9.14YY282 pKa = 10.17KK283 pKa = 10.23PYY285 pKa = 9.56STIPSDD291 pKa = 4.58LKK293 pKa = 10.7FHH295 pKa = 6.81YY296 pKa = 8.18KK297 pKa = 7.68TQSGGEE303 pKa = 4.14SAINGPDD310 pKa = 3.5SKK312 pKa = 11.17EE313 pKa = 3.74KK314 pKa = 10.9ALTLEE319 pKa = 4.82GGWFQPKK326 pKa = 9.74ILGAYY331 pKa = 9.25KK332 pKa = 8.79ITKK335 pKa = 9.93GSTITQYY342 pKa = 11.76GEE344 pKa = 3.96LPMVLLRR351 pKa = 11.84YY352 pKa = 9.87NPAADD357 pKa = 3.49QGPGNIVTIIDD368 pKa = 4.06LVSGQWQGPYY378 pKa = 9.9PDD380 pKa = 5.72DD381 pKa = 3.63YY382 pKa = 10.83TIKK385 pKa = 10.68DD386 pKa = 3.61VPLWLALNGYY396 pKa = 8.72PNYY399 pKa = 10.43VMQKK403 pKa = 10.0SGDD406 pKa = 3.56KK407 pKa = 11.05GILKK411 pKa = 10.33HH412 pKa = 7.01KK413 pKa = 9.0LICVKK418 pKa = 10.45SAALYY423 pKa = 9.64RR424 pKa = 11.84LPTVSTQKK432 pKa = 9.72IFPIIGVKK440 pKa = 9.76FVNGKK445 pKa = 8.93PPYY448 pKa = 9.0DD449 pKa = 3.56QPLTSDD455 pKa = 3.9MSKK458 pKa = 10.13AWYY461 pKa = 8.61PIYY464 pKa = 10.22EE465 pKa = 4.31HH466 pKa = 5.75QQEE469 pKa = 4.31PLNDD473 pKa = 3.66IVCCGPLVPKK483 pKa = 10.24FYY485 pKa = 10.96NQTNSTWEE493 pKa = 3.56LQYY496 pKa = 10.64FYY498 pKa = 11.03RR499 pKa = 11.84FYY501 pKa = 10.8FKK503 pKa = 10.24WGGPEE508 pKa = 3.74IGDD511 pKa = 3.82PTVDD515 pKa = 3.66DD516 pKa = 5.13PKK518 pKa = 10.97TKK520 pKa = 10.47GQATTDD526 pKa = 3.41YY527 pKa = 10.04TMPRR531 pKa = 11.84SIQVFNPLKK540 pKa = 10.77NKK542 pKa = 9.32TEE544 pKa = 4.66SILHH548 pKa = 5.88PWDD551 pKa = 3.57FRR553 pKa = 11.84RR554 pKa = 11.84GIVTKK559 pKa = 10.42RR560 pKa = 11.84ALEE563 pKa = 3.96RR564 pKa = 11.84MCQNLEE570 pKa = 4.0TDD572 pKa = 3.7SNFYY576 pKa = 10.38PDD578 pKa = 4.76GEE580 pKa = 4.53TPKK583 pKa = 10.4KK584 pKa = 10.08KK585 pKa = 10.45KK586 pKa = 9.18KK587 pKa = 5.61TTCEE591 pKa = 3.44LRR593 pKa = 11.84NPQEE597 pKa = 4.24EE598 pKa = 4.21IKK600 pKa = 10.47EE601 pKa = 4.15VQSCILSLCQTEE613 pKa = 4.37TSEE616 pKa = 5.61EE617 pKa = 4.03EE618 pKa = 4.37DD619 pKa = 3.94PNNLQQLIHH628 pKa = 5.91KK629 pKa = 9.86QKK631 pKa = 10.85LKK633 pKa = 10.14QQQLKK638 pKa = 10.82HH639 pKa = 6.35NILVLLTDD647 pKa = 5.09LKK649 pKa = 10.33TKK651 pKa = 10.54QNSLRR656 pKa = 11.84LQTGNLQQ663 pKa = 3.29

Molecular weight: 77.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1297

120

663

324.3

37.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.708 ± 1.867

1.928 ± 0.095

4.703 ± 0.587

6.862 ± 1.541

2.93 ± 0.376

5.32 ± 0.715

3.007 ± 0.677

5.628 ± 0.258

9.098 ± 0.957

8.096 ± 0.819

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.005 ± 0.251

5.012 ± 0.614

6.322 ± 0.736

5.166 ± 0.49

6.322 ± 0.915

5.628 ± 1.619

7.17 ± 0.459

2.39 ± 0.709

1.619 ± 0.52

4.086 ± 0.688
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski