Canarypox virus (CNPV)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 322 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6VZ64|Q6VZ64_CNPV CC chemokine-like protein OS=Canarypox virus OX=44088 GN=CNPV283 PE=4 SV=1
MM1 pKa = 7.27NNNVKK6 pKa = 10.47LMFMVFILILTKK18 pKa = 10.45TIAQKK23 pKa = 10.03MDD25 pKa = 3.0APTTTSYY32 pKa = 7.91TTEE35 pKa = 4.11EE36 pKa = 4.2EE37 pKa = 4.23DD38 pKa = 4.99DD39 pKa = 4.59SEE41 pKa = 5.16EE42 pKa = 4.21EE43 pKa = 4.93DD44 pKa = 4.28DD45 pKa = 6.08NEE47 pKa = 5.26DD48 pKa = 4.46EE49 pKa = 5.67PEE51 pKa = 3.86QDD53 pKa = 3.29CCKK56 pKa = 10.98DD57 pKa = 3.46EE58 pKa = 4.36TGCPYY63 pKa = 10.46VSNSIYY69 pKa = 10.57VSNGTTFNVVCVGCSSDD86 pKa = 3.66YY87 pKa = 11.85NNFTLLWMVNGTVIEE102 pKa = 4.4NNTDD106 pKa = 2.79TGFTYY111 pKa = 10.7NISVLDD117 pKa = 3.68VSSNFSSATVLSSVNLNRR135 pKa = 11.84HH136 pKa = 6.6DD137 pKa = 4.3YY138 pKa = 9.84NNSNITCILNDD149 pKa = 3.82PKK151 pKa = 11.02GSKK154 pKa = 9.91SDD156 pKa = 3.67SFDD159 pKa = 3.33TKK161 pKa = 11.36SMNNRR166 pKa = 11.84YY167 pKa = 9.3EE168 pKa = 4.12KK169 pKa = 10.18IRR171 pKa = 11.84YY172 pKa = 8.78LKK174 pKa = 10.35EE175 pKa = 3.77NNITLATEE183 pKa = 4.24EE184 pKa = 4.43EE185 pKa = 4.55FNNYY189 pKa = 8.59TITVKK194 pKa = 10.68KK195 pKa = 10.64

Molecular weight: 22.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6VZJ4|Q6VZJ4_CNPV ATP-dependent helicase Rep OS=Canarypox virus OX=44088 GN=CNPV153 PE=3 SV=1
MM1 pKa = 7.34MLNPPQVEE9 pKa = 4.15ASAHH13 pKa = 4.88CVRR16 pKa = 11.84LLYY19 pKa = 10.42ALKK22 pKa = 10.7GSLLLDD28 pKa = 3.39MAGNGILIALTFPIRR43 pKa = 11.84KK44 pKa = 9.12KK45 pKa = 11.02VVFKK49 pKa = 11.07HH50 pKa = 5.3NNSYY54 pKa = 11.27DD55 pKa = 3.97SNPCSPSRR63 pKa = 11.84RR64 pKa = 11.84FKK66 pKa = 11.03LRR68 pKa = 11.84ALFLLSLLGLKK79 pKa = 10.39LRR81 pKa = 11.84DD82 pKa = 3.59LYY84 pKa = 10.86RR85 pKa = 11.84KK86 pKa = 9.94RR87 pKa = 11.84FISIHH92 pKa = 5.09

Molecular weight: 10.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

322

0

322

106963

45

1951

332.2

38.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.485 ± 0.088

2.23 ± 0.071

6.439 ± 0.09

5.926 ± 0.146

3.958 ± 0.101

3.847 ± 0.106

1.983 ± 0.053

9.644 ± 0.161

8.379 ± 0.135

9.203 ± 0.157

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.571 ± 0.054

7.626 ± 0.149

2.93 ± 0.082

1.92 ± 0.087

4.137 ± 0.105

7.878 ± 0.168

5.506 ± 0.107

5.957 ± 0.083

0.658 ± 0.036

5.722 ± 0.105
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski