Desulfallas thermosapovorans DSM 6562

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Desulfallaceae; Desulfallas; Desulfallas thermosapovorans

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2860 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5S4ZSM6|A0A5S4ZSM6_9FIRM Probable molybdenum cofactor guanylyltransferase OS=Desulfallas thermosapovorans DSM 6562 OX=1121431 GN=mobA PE=3 SV=1
MM1 pKa = 7.34IRR3 pKa = 11.84NHH5 pKa = 6.62KK6 pKa = 10.5GGIFVSDD13 pKa = 4.53LKK15 pKa = 11.47SKK17 pKa = 10.2VAYY20 pKa = 10.01LQGLANGMNMEE31 pKa = 4.87ADD33 pKa = 3.61SKK35 pKa = 10.84EE36 pKa = 3.86GKK38 pKa = 10.15LLGGIIDD45 pKa = 4.11VLDD48 pKa = 3.96EE49 pKa = 4.4FADD52 pKa = 3.75SFSEE56 pKa = 4.35LEE58 pKa = 4.01EE59 pKa = 4.1SQEE62 pKa = 3.79QLEE65 pKa = 4.84EE66 pKa = 4.11YY67 pKa = 11.02VEE69 pKa = 4.2TLDD72 pKa = 3.62EE73 pKa = 5.13DD74 pKa = 5.54LYY76 pKa = 10.81TLEE79 pKa = 4.58NDD81 pKa = 3.19MHH83 pKa = 8.08GEE85 pKa = 4.12EE86 pKa = 4.21EE87 pKa = 4.33LEE89 pKa = 4.06EE90 pKa = 4.16YY91 pKa = 10.38MEE93 pKa = 4.4VDD95 pKa = 4.0CPRR98 pKa = 11.84CGEE101 pKa = 4.3TVLFDD106 pKa = 4.16SDD108 pKa = 3.47IVEE111 pKa = 4.7DD112 pKa = 3.89EE113 pKa = 5.12DD114 pKa = 5.05IIEE117 pKa = 4.37VTCPNCDD124 pKa = 2.5EE125 pKa = 4.37VVFVNDD131 pKa = 4.87DD132 pKa = 3.69GYY134 pKa = 10.24EE135 pKa = 4.08TADD138 pKa = 3.62EE139 pKa = 4.33PEE141 pKa = 4.3ILHH144 pKa = 6.14SRR146 pKa = 11.84NSAIEE151 pKa = 3.72EE152 pKa = 4.59DD153 pKa = 3.6II154 pKa = 4.74

Molecular weight: 17.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5S4ZQB2|A0A5S4ZQB2_9FIRM Amino-acid N-acetyltransferase OS=Desulfallas thermosapovorans DSM 6562 OX=1121431 GN=LX24_02000 PE=4 SV=1
MM1 pKa = 7.5SSKK4 pKa = 10.58EE5 pKa = 3.87CIIRR9 pKa = 11.84VDD11 pKa = 3.27IPTGRR16 pKa = 11.84VLEE19 pKa = 4.9DD20 pKa = 3.18NLHH23 pKa = 6.28AFWEE27 pKa = 4.72TQARR31 pKa = 11.84RR32 pKa = 11.84SDD34 pKa = 3.65LPDD37 pKa = 4.0PVWHH41 pKa = 6.96SNPAMHH47 pKa = 7.22GYY49 pKa = 10.39AGPQPRR55 pKa = 11.84GAQTGTVQPPYY66 pKa = 10.42EE67 pKa = 4.01LLEE70 pKa = 4.03RR71 pKa = 11.84VQRR74 pKa = 11.84FNAARR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84RR82 pKa = 11.84TKK84 pKa = 10.61NAWTDD89 pKa = 3.14TEE91 pKa = 4.37MYY93 pKa = 10.26RR94 pKa = 11.84LAVLVAVQNQKK105 pKa = 9.27PHH107 pKa = 4.96QAAARR112 pKa = 11.84LARR115 pKa = 11.84TPRR118 pKa = 11.84ACRR121 pKa = 11.84DD122 pKa = 3.22MFRR125 pKa = 11.84TLKK128 pKa = 10.11NAGVII133 pKa = 3.9

Molecular weight: 15.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2860

0

2860

839009

40

1766

293.4

32.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.8 ± 0.052

1.228 ± 0.021

5.086 ± 0.031

6.563 ± 0.043

3.605 ± 0.032

8.145 ± 0.044

1.918 ± 0.018

6.723 ± 0.046

5.468 ± 0.038

10.067 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.749 ± 0.019

3.98 ± 0.026

4.391 ± 0.028

3.575 ± 0.029

5.764 ± 0.045

4.845 ± 0.032

5.069 ± 0.027

7.875 ± 0.044

0.947 ± 0.018

3.202 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski