Meleagrid herpesvirus 1 (MeHV-1) (Turkey herpesvirus)

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Mardivirus

Average proteome isoelectric point is 6.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 87 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9DPP7|Q9DPP7_MEHV1 Uncharacterized protein HVT068 OS=Meleagrid herpesvirus 1 OX=37108 GN=HVT068 PE=4 SV=1
MM1 pKa = 7.82DD2 pKa = 5.16AEE4 pKa = 4.67RR5 pKa = 11.84PPGDD9 pKa = 4.22PEE11 pKa = 4.85NGLPLTTLEE20 pKa = 4.3ARR22 pKa = 11.84HH23 pKa = 6.4DD24 pKa = 4.14RR25 pKa = 11.84DD26 pKa = 3.96SNSAPIEE33 pKa = 4.12EE34 pKa = 4.42VAGDD38 pKa = 4.12IPAPSPPEE46 pKa = 3.91YY47 pKa = 10.5LALTLSEE54 pKa = 4.54AEE56 pKa = 4.75SIFEE60 pKa = 4.08PRR62 pKa = 11.84PARR65 pKa = 11.84GPEE68 pKa = 4.19GDD70 pKa = 3.71PHH72 pKa = 6.34PRR74 pKa = 11.84LYY76 pKa = 10.41PPLPPPNYY84 pKa = 9.06EE85 pKa = 4.49DD86 pKa = 5.74LFAEE90 pKa = 5.13DD91 pKa = 4.42PTPHH95 pKa = 6.93RR96 pKa = 11.84PYY98 pKa = 10.61DD99 pKa = 3.49IASDD103 pKa = 3.58AVAIAILGVAFVGTVLSVVVLLVCSKK129 pKa = 11.22

Molecular weight: 13.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9DH38|Q9DH38_MEHV1 UL46 tegument phosphoprotein OS=Meleagrid herpesvirus 1 OX=37108 GN=HVT054 PE=3 SV=1
MM1 pKa = 8.07RR2 pKa = 11.84ITHH5 pKa = 6.28TLDD8 pKa = 3.31FSGSLGGTILINAAVYY24 pKa = 8.82QRR26 pKa = 11.84RR27 pKa = 11.84GLVAGGQGYY36 pKa = 7.32QRR38 pKa = 11.84RR39 pKa = 11.84ARR41 pKa = 11.84CSSLLADD48 pKa = 3.85TGDD51 pKa = 3.86PNEE54 pKa = 4.35PLMPARR60 pKa = 11.84AVLTHH65 pKa = 6.54PPCSRR70 pKa = 11.84NHH72 pKa = 6.06SPCSSARR79 pKa = 11.84YY80 pKa = 8.31AASAAAKK87 pKa = 10.02RR88 pKa = 11.84LGPSSQPFSYY98 pKa = 10.39SAVASEE104 pKa = 4.55PPRR107 pKa = 11.84TMVARR112 pKa = 11.84HH113 pKa = 5.78RR114 pKa = 11.84PQLKK118 pKa = 9.53PLPEE122 pKa = 4.45FNSDD126 pKa = 3.29TTLCSADD133 pKa = 3.36NAACVPPLANGAQEE147 pKa = 4.19RR148 pKa = 11.84KK149 pKa = 9.57KK150 pKa = 10.6GLSRR154 pKa = 11.84RR155 pKa = 11.84SSSAAARR162 pKa = 11.84RR163 pKa = 11.84SSAAVGLGGGPSLPQQCWKK182 pKa = 10.87

Molecular weight: 19.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

87

0

87

41221

69

3112

473.8

52.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.894 ± 0.219

2.484 ± 0.139

5.548 ± 0.162

5.172 ± 0.162

3.85 ± 0.181

5.963 ± 0.16

2.457 ± 0.083

6.101 ± 0.212

4.013 ± 0.146

9.182 ± 0.228

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.644 ± 0.089

4.187 ± 0.138

5.235 ± 0.313

2.627 ± 0.096

6.776 ± 0.196

8.581 ± 0.223

6.434 ± 0.152

6.128 ± 0.127

1.116 ± 0.066

3.607 ± 0.115
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski