Luteibaculum oceani

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Luteibaculaceae; Luteibaculum

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2382 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5C6V129|A0A5C6V129_9FLAO Na/Pi cotransporter family protein OS=Luteibaculum oceani OX=1294296 GN=FRX97_06655 PE=4 SV=1
MM1 pKa = 7.44RR2 pKa = 11.84TLTLILLLGFLPAFLIAQNNYY23 pKa = 8.35CQPKK27 pKa = 10.15GGSPCNFQWIEE38 pKa = 4.01TFSCNNVLQNDD49 pKa = 5.91GYY51 pKa = 11.04CDD53 pKa = 4.36RR54 pKa = 11.84EE55 pKa = 4.57DD56 pKa = 4.05NDD58 pKa = 3.26EE59 pKa = 4.16TAPGFNPDD67 pKa = 3.55GYY69 pKa = 11.06SDD71 pKa = 3.84YY72 pKa = 11.45SDD74 pKa = 3.4FVVIFTPGQVTTAVLTVDD92 pKa = 3.81GNVFDD97 pKa = 5.89EE98 pKa = 4.22ISGWIDD104 pKa = 2.88WDD106 pKa = 3.55NSGTFDD112 pKa = 3.56TDD114 pKa = 3.5EE115 pKa = 5.05IITFRR120 pKa = 11.84GEE122 pKa = 4.05STVVNEE128 pKa = 3.97MTAVITVPSDD138 pKa = 3.14AVQDD142 pKa = 4.03SVILGGFRR150 pKa = 11.84IKK152 pKa = 10.41QDD154 pKa = 3.44FLEE157 pKa = 5.69PITDD161 pKa = 3.75PCADD165 pKa = 3.44IGNGEE170 pKa = 4.0IEE172 pKa = 4.8DD173 pKa = 3.7YY174 pKa = 11.49SFIVTNSGTTDD185 pKa = 3.15GGANDD190 pKa = 3.7YY191 pKa = 11.07CSARR195 pKa = 11.84GDD197 pKa = 4.06SPCNFQWIEE206 pKa = 3.88TFTCKK211 pKa = 10.39NVIQDD216 pKa = 3.91DD217 pKa = 5.55GYY219 pKa = 11.54CDD221 pKa = 5.28RR222 pKa = 11.84EE223 pKa = 4.59DD224 pKa = 4.05NDD226 pKa = 3.28EE227 pKa = 4.16TAPDD231 pKa = 4.6FDD233 pKa = 5.11PDD235 pKa = 3.98GYY237 pKa = 11.37SDD239 pKa = 4.05YY240 pKa = 11.71SDD242 pKa = 3.48FTVIFAPGEE251 pKa = 4.32VVTATLTVDD260 pKa = 3.41GNVFDD265 pKa = 5.93EE266 pKa = 4.37ISGWLDD272 pKa = 2.83WDD274 pKa = 5.0NSGTWDD280 pKa = 3.6NDD282 pKa = 3.45EE283 pKa = 4.89IITFRR288 pKa = 11.84GEE290 pKa = 4.05STVVNEE296 pKa = 3.84MTAIITVPQDD306 pKa = 3.07AVEE309 pKa = 4.39GVHH312 pKa = 6.8IIGGFRR318 pKa = 11.84IKK320 pKa = 10.36QDD322 pKa = 3.44FLEE325 pKa = 5.69PITDD329 pKa = 3.75PCADD333 pKa = 3.44IGNGEE338 pKa = 4.0IEE340 pKa = 4.79DD341 pKa = 3.71YY342 pKa = 10.92SFIVIPPDD350 pKa = 3.82NIGCASSFIPQDD362 pKa = 3.32STQNICTSTQLSWGAVSGASSYY384 pKa = 11.16QLLVLDD390 pKa = 4.79SSGDD394 pKa = 3.86TIDD397 pKa = 3.87SKK399 pKa = 11.24QVSDD403 pKa = 3.58TNLFVTGLRR412 pKa = 11.84ASEE415 pKa = 4.06AYY417 pKa = 9.18KK418 pKa = 10.26WIVKK422 pKa = 9.93PIDD425 pKa = 3.57DD426 pKa = 3.89QGRR429 pKa = 11.84KK430 pKa = 9.61SFGCDD435 pKa = 2.26TLTFFTADD443 pKa = 3.27AADD446 pKa = 3.85PTVSFSPDD454 pKa = 3.12SVDD457 pKa = 3.3VCEE460 pKa = 5.0GRR462 pKa = 11.84PLVLNPTITGGGTLSYY478 pKa = 10.37NWSGDD483 pKa = 3.38LSLLSDD489 pKa = 4.03PAVDD493 pKa = 3.35NPVFNSEE500 pKa = 3.84LPEE503 pKa = 3.91FFKK506 pKa = 11.45YY507 pKa = 10.39SLQVSNQYY515 pKa = 10.52GCSNSDD521 pKa = 3.45SLVVQVFEE529 pKa = 4.38KK530 pKa = 10.85GKK532 pKa = 10.37VVNASVNSRR541 pKa = 11.84EE542 pKa = 3.88ICFGEE547 pKa = 4.58DD548 pKa = 4.56LILTLDD554 pKa = 4.38FEE556 pKa = 6.04ADD558 pKa = 3.22SLNFLKK564 pKa = 10.63QSQNGMEE571 pKa = 4.7DD572 pKa = 3.54VSPLNQLGDD581 pKa = 3.47QYY583 pKa = 11.44IFNDD587 pKa = 3.68VDD589 pKa = 3.68TVIYY593 pKa = 10.19GVEE596 pKa = 4.23LFANGCADD604 pKa = 4.02TAWLDD609 pKa = 3.73TVVFLPQLEE618 pKa = 4.04IPEE621 pKa = 4.76IIFEE625 pKa = 4.57NPDD628 pKa = 3.41SLGPCPGEE636 pKa = 4.45DD637 pKa = 3.35YY638 pKa = 11.06LIRR641 pKa = 11.84VNNYY645 pKa = 8.64TDD647 pKa = 3.73FLSWSNGASGDD658 pKa = 4.06SIFVNEE664 pKa = 4.3TTNLTVTYY672 pKa = 10.6DD673 pKa = 3.79DD674 pKa = 4.28GCVISTDD681 pKa = 3.13TSFTFDD687 pKa = 3.74EE688 pKa = 4.71VPNTILLAIDD698 pKa = 4.27RR699 pKa = 11.84SPALLCEE706 pKa = 4.41GDD708 pKa = 4.18SIEE711 pKa = 4.11VSHH714 pKa = 7.25GIGIDD719 pKa = 3.45GFVWYY724 pKa = 10.09DD725 pKa = 3.31GDD727 pKa = 5.37DD728 pKa = 3.65SSLSKK733 pKa = 9.61WVKK736 pKa = 9.46DD737 pKa = 3.24TTLIYY742 pKa = 10.81VDD744 pKa = 5.36FISDD748 pKa = 4.02RR749 pKa = 11.84GCVKK753 pKa = 10.56VSDD756 pKa = 3.67SVQFNFKK763 pKa = 10.08PFPEE767 pKa = 4.06QAQISSLLPLDD778 pKa = 4.24SLCEE782 pKa = 3.96GDD784 pKa = 3.71VTEE787 pKa = 5.59LVSTDD792 pKa = 3.78SIYY795 pKa = 11.4DD796 pKa = 3.88LLWNTGASTPSILVSDD812 pKa = 3.94SGKK815 pKa = 10.3YY816 pKa = 8.16WLEE819 pKa = 4.07SFNGNCKK826 pKa = 9.81TISDD830 pKa = 4.18TLRR833 pKa = 11.84VDD835 pKa = 4.42FGVIPPQSSISQVVSGEE852 pKa = 4.02DD853 pKa = 3.35SLISFHH859 pKa = 7.15VADD862 pKa = 4.53HH863 pKa = 6.29YY864 pKa = 11.73DD865 pKa = 3.27WYY867 pKa = 11.12AEE869 pKa = 4.12GQLLTFDD876 pKa = 3.67EE877 pKa = 5.13RR878 pKa = 11.84IIPFVNEE885 pKa = 3.33VTYY888 pKa = 9.66TVQLRR893 pKa = 11.84SSRR896 pKa = 11.84GCLGPMSEE904 pKa = 5.03SFFKK908 pKa = 10.93NATSISEE915 pKa = 3.89FQEE918 pKa = 4.02YY919 pKa = 10.68GFVIYY924 pKa = 10.6KK925 pKa = 9.3EE926 pKa = 4.04AGRR929 pKa = 11.84SKK931 pKa = 10.9VKK933 pKa = 10.14NQRR936 pKa = 11.84PFEE939 pKa = 4.39ASLYY943 pKa = 9.3TIDD946 pKa = 4.32GRR948 pKa = 11.84LIKK951 pKa = 10.55KK952 pKa = 10.1LGSTFVFEE960 pKa = 5.14WDD962 pKa = 3.35NQGPVLLSLTLVNGKK977 pKa = 8.31QVVLKK982 pKa = 10.77VDD984 pKa = 3.31

Molecular weight: 108.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5C6V5E2|A0A5C6V5E2_9FLAO Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Luteibaculum oceani OX=1294296 GN=bioA PE=3 SV=1
FF1 pKa = 7.29KK2 pKa = 10.35EE3 pKa = 4.01NRR5 pKa = 11.84GKK7 pKa = 10.33IYY9 pKa = 10.78AFTRR13 pKa = 11.84LARR16 pKa = 11.84WHH18 pKa = 6.7EE19 pKa = 4.29EE20 pKa = 3.85VAQSGFKK27 pKa = 10.53SFNTISRR34 pKa = 11.84TIQNHH39 pKa = 4.44YY40 pKa = 7.68QTIINYY46 pKa = 9.29FDD48 pKa = 3.49NRR50 pKa = 11.84STNAAAEE57 pKa = 4.23SFNAKK62 pKa = 9.24IKK64 pKa = 10.71AFRR67 pKa = 11.84AQFRR71 pKa = 11.84GVRR74 pKa = 11.84KK75 pKa = 9.71IEE77 pKa = 3.94FFLFRR82 pKa = 11.84LTQIYY87 pKa = 10.32AA88 pKa = 3.37

Molecular weight: 10.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2382

0

2382

906267

27

4889

380.5

42.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.704 ± 0.047

1.033 ± 0.021

5.545 ± 0.045

6.716 ± 0.058

5.151 ± 0.036

7.058 ± 0.051

1.755 ± 0.024

7.211 ± 0.039

7.007 ± 0.069

9.37 ± 0.067

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.943 ± 0.022

5.784 ± 0.047

3.94 ± 0.037

3.477 ± 0.028

3.745 ± 0.036

6.758 ± 0.044

5.381 ± 0.062

6.445 ± 0.045

1.151 ± 0.018

3.825 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski