Achimota virus 2

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Pararubulavirus; Achimota pararubulavirus 2

Average proteome isoelectric point is 7.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K7XN73|K7XN73_9MONO Fusion glycoprotein F0 OS=Achimota virus 2 OX=1261101 GN=F PE=3 SV=1
MM1 pKa = 7.4SSVFRR6 pKa = 11.84AFEE9 pKa = 3.96QFTLEE14 pKa = 4.13QEE16 pKa = 4.0QHH18 pKa = 5.41EE19 pKa = 4.61RR20 pKa = 11.84GSDD23 pKa = 3.57LEE25 pKa = 4.46VPPEE29 pKa = 4.0TLQTTIKK36 pKa = 10.61VFILNTPNPQIRR48 pKa = 11.84YY49 pKa = 9.36QMMNFCLRR57 pKa = 11.84IIASSSSRR65 pKa = 11.84IAQKK69 pKa = 10.82NGALLTLLSLPTAMMQNHH87 pKa = 5.88IRR89 pKa = 11.84IADD92 pKa = 4.27RR93 pKa = 11.84SPDD96 pKa = 3.79SIIEE100 pKa = 4.32RR101 pKa = 11.84IEE103 pKa = 3.77IEE105 pKa = 4.14GFEE108 pKa = 3.99QGTYY112 pKa = 10.11RR113 pKa = 11.84LRR115 pKa = 11.84PNARR119 pKa = 11.84TPMTNGEE126 pKa = 3.98ITALEE131 pKa = 4.09QMAEE135 pKa = 4.19DD136 pKa = 4.16LPEE139 pKa = 5.28GIANDD144 pKa = 3.8TPYY147 pKa = 10.56INPNIEE153 pKa = 4.74GDD155 pKa = 3.87DD156 pKa = 3.82CDD158 pKa = 4.54EE159 pKa = 4.26MEE161 pKa = 4.74KK162 pKa = 10.54FLNAIYY168 pKa = 10.49SVLVQVWITVCKK180 pKa = 10.58CMTAYY185 pKa = 9.75DD186 pKa = 3.94QPTGSDD192 pKa = 3.01EE193 pKa = 4.13RR194 pKa = 11.84RR195 pKa = 11.84LAKK198 pKa = 10.17YY199 pKa = 8.02QQQGRR204 pKa = 11.84LDD206 pKa = 3.52QKK208 pKa = 11.12YY209 pKa = 9.46VLQNEE214 pKa = 4.05IRR216 pKa = 11.84RR217 pKa = 11.84IIQKK221 pKa = 9.95CIRR224 pKa = 11.84DD225 pKa = 3.91SLTVRR230 pKa = 11.84QFLTFEE236 pKa = 4.2LQTARR241 pKa = 11.84KK242 pKa = 8.52QGPITSRR249 pKa = 11.84YY250 pKa = 7.52YY251 pKa = 11.77AMVGDD256 pKa = 3.41IGKK259 pKa = 9.98YY260 pKa = 9.36IEE262 pKa = 4.28NAGMSAFFMTTRR274 pKa = 11.84FALGTKK280 pKa = 8.93WPPLALAAFSGEE292 pKa = 4.18LIKK295 pKa = 11.03LKK297 pKa = 10.64SLMMLYY303 pKa = 10.14RR304 pKa = 11.84RR305 pKa = 11.84LGEE308 pKa = 3.84RR309 pKa = 11.84ARR311 pKa = 11.84FMALLEE317 pKa = 4.13MQEE320 pKa = 4.06MMEE323 pKa = 4.51FAPANYY329 pKa = 9.1PLTYY333 pKa = 9.81SYY335 pKa = 11.83AMGIGSVQDD344 pKa = 3.54PQMRR348 pKa = 11.84NYY350 pKa = 10.64NFARR354 pKa = 11.84TFLNAAYY361 pKa = 9.02FQLGVEE367 pKa = 4.29TANRR371 pKa = 11.84QQGSVDD377 pKa = 2.85KK378 pKa = 11.36GMAEE382 pKa = 3.9EE383 pKa = 5.05LGLSEE388 pKa = 4.12ADD390 pKa = 3.41KK391 pKa = 11.39RR392 pKa = 11.84EE393 pKa = 3.81MSATLTRR400 pKa = 11.84LTTGRR405 pKa = 11.84GAVGPAGNVDD415 pKa = 3.44VLGRR419 pKa = 11.84RR420 pKa = 11.84PTTRR424 pKa = 11.84LQQQDD429 pKa = 3.41PAQFRR434 pKa = 11.84VVEE437 pKa = 4.21EE438 pKa = 4.22DD439 pKa = 3.5QEE441 pKa = 4.54DD442 pKa = 5.02DD443 pKa = 3.82EE444 pKa = 7.26DD445 pKa = 4.59EE446 pKa = 5.6DD447 pKa = 5.4DD448 pKa = 5.37DD449 pKa = 4.4EE450 pKa = 7.38GYY452 pKa = 10.04VQPRR456 pKa = 11.84ALQLPPNPPARR467 pKa = 11.84NDD469 pKa = 2.63EE470 pKa = 4.02WFRR473 pKa = 11.84RR474 pKa = 11.84MAEE477 pKa = 3.81QEE479 pKa = 4.11VQGRR483 pKa = 11.84LVRR486 pKa = 11.84TTADD490 pKa = 2.52IHH492 pKa = 6.29QIIPATPGNQEE503 pKa = 4.24DD504 pKa = 4.54EE505 pKa = 4.51NPLVDD510 pKa = 3.69MDD512 pKa = 4.06EE513 pKa = 4.15

Molecular weight: 58.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K7XBD8|K7XBD8_9MONO Phosphoprotein OS=Achimota virus 2 OX=1261101 GN=P PE=3 SV=1
MM1 pKa = 7.89SSMASSIKK9 pKa = 10.72LPVDD13 pKa = 3.59LRR15 pKa = 11.84SEE17 pKa = 4.36KK18 pKa = 10.56YY19 pKa = 9.48HH20 pKa = 6.02LHH22 pKa = 6.79PFPIVQTPSGEE33 pKa = 4.11DD34 pKa = 3.23GKK36 pKa = 11.29GSRR39 pKa = 11.84LVKK42 pKa = 9.67QLRR45 pKa = 11.84IKK47 pKa = 11.05NLMPRR52 pKa = 11.84GSTEE56 pKa = 3.89QPITFLNTYY65 pKa = 10.06GFVRR69 pKa = 11.84PMRR72 pKa = 11.84THH74 pKa = 6.8GEE76 pKa = 4.11FFSEE80 pKa = 4.43FHH82 pKa = 6.98RR83 pKa = 11.84PDD85 pKa = 3.09TTPCVTACMLPFGAGPFLDD104 pKa = 3.84NPTRR108 pKa = 11.84LIDD111 pKa = 4.96EE112 pKa = 4.37IDD114 pKa = 3.42KK115 pKa = 11.11AHH117 pKa = 6.96IIIRR121 pKa = 11.84KK122 pKa = 6.96SASYY126 pKa = 10.29RR127 pKa = 11.84EE128 pKa = 4.2EE129 pKa = 4.51IIFDD133 pKa = 3.7IKK135 pKa = 10.66KK136 pKa = 9.68LPSMLTQHH144 pKa = 6.58QLAQDD149 pKa = 4.07KK150 pKa = 9.82IICVSSEE157 pKa = 4.14KK158 pKa = 10.32FLKK161 pKa = 10.89SPGKK165 pKa = 8.27VTSGVDD171 pKa = 3.27YY172 pKa = 10.51LYY174 pKa = 10.83SITFMSITYY183 pKa = 10.03CPASYY188 pKa = 10.4KK189 pKa = 10.38FRR191 pKa = 11.84VSRR194 pKa = 11.84PLQIIRR200 pKa = 11.84AKK202 pKa = 10.79AMRR205 pKa = 11.84SVHH208 pKa = 7.05LEE210 pKa = 2.84IMMRR214 pKa = 11.84IEE216 pKa = 4.36CKK218 pKa = 9.97KK219 pKa = 10.72DD220 pKa = 3.32SPLLKK225 pKa = 10.99NMITTDD231 pKa = 3.38GSEE234 pKa = 4.18GGVVSVWFHH243 pKa = 5.84ICNLYY248 pKa = 10.31KK249 pKa = 10.87GNNPAKK255 pKa = 9.86EE256 pKa = 3.94YY257 pKa = 10.65DD258 pKa = 3.39DD259 pKa = 5.59SYY261 pKa = 11.65FSKK264 pKa = 10.41KK265 pKa = 9.04CKK267 pKa = 10.16QMDD270 pKa = 3.83IEE272 pKa = 4.52CGIVDD277 pKa = 3.48MWGPTLMVHH286 pKa = 6.25AHH288 pKa = 4.22GHH290 pKa = 5.07IPKK293 pKa = 9.02MAKK296 pKa = 9.95PFFNRR301 pKa = 11.84KK302 pKa = 7.83GWACYY307 pKa = 9.42PFSDD311 pKa = 5.0AAAGLSKK318 pKa = 9.57TLWSVGATIVEE329 pKa = 4.47VNAILQASDD338 pKa = 3.85LAQLTHH344 pKa = 5.61VHH346 pKa = 6.91DD347 pKa = 5.1IIYY350 pKa = 9.42PKK352 pKa = 10.77VKK354 pKa = 10.33LSKK357 pKa = 10.49EE358 pKa = 3.96LVNYY362 pKa = 9.59QPSKK366 pKa = 10.1WNPLKK371 pKa = 10.85KK372 pKa = 9.85IVSII376 pKa = 4.49

Molecular weight: 42.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

2

8

5074

166

2273

634.3

71.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.011 ± 0.664

2.089 ± 0.327

5.361 ± 0.34

5.104 ± 0.48

3.587 ± 0.321

5.124 ± 0.575

2.05 ± 0.293

7.627 ± 0.599

5.282 ± 0.667

10.485 ± 1.484

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.345 ± 0.445

4.572 ± 0.495

5.518 ± 0.875

5.045 ± 0.579

4.966 ± 0.479

8.632 ± 0.695

6.445 ± 0.226

5.617 ± 0.491

1.084 ± 0.277

3.055 ± 0.38
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski