Amino acid dipepetide frequency for Hubei tetragnatha maxillosa virus 4

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
7.126AlaAla: 7.126 ± 0.0
1.018AlaCys: 1.018 ± 0.0
2.375AlaAsp: 2.375 ± 0.0
2.715AlaGlu: 2.715 ± 0.0
2.375AlaPhe: 2.375 ± 0.0
6.787AlaGly: 6.787 ± 0.0
4.072AlaHis: 4.072 ± 0.0
4.072AlaIle: 4.072 ± 0.0
4.072AlaLys: 4.072 ± 0.0
7.465AlaLeu: 7.465 ± 0.0
2.375AlaMet: 2.375 ± 0.0
4.411AlaAsn: 4.411 ± 0.0
4.072AlaPro: 4.072 ± 0.0
4.751AlaGln: 4.751 ± 0.0
3.393AlaArg: 3.393 ± 0.0
5.429AlaSer: 5.429 ± 0.0
3.733AlaThr: 3.733 ± 0.0
5.09AlaVal: 5.09 ± 0.0
1.018AlaTrp: 1.018 ± 0.0
1.697AlaTyr: 1.697 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.679CysAla: 0.679 ± 0.0
0.339CysCys: 0.339 ± 0.0
0.339CysAsp: 0.339 ± 0.0
0.679CysGlu: 0.679 ± 0.0
0.339CysPhe: 0.339 ± 0.0
1.018CysGly: 1.018 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.679CysIle: 0.679 ± 0.0
0.679CysLys: 0.679 ± 0.0
1.697CysLeu: 1.697 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.339CysAsn: 0.339 ± 0.0
0.679CysPro: 0.679 ± 0.0
0.339CysGln: 0.339 ± 0.0
0.339CysArg: 0.339 ± 0.0
1.018CysSer: 1.018 ± 0.0
1.018CysThr: 1.018 ± 0.0
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.339CysTyr: 0.339 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.393AspAla: 3.393 ± 0.0
1.018AspCys: 1.018 ± 0.0
3.393AspAsp: 3.393 ± 0.0
2.036AspGlu: 2.036 ± 0.0
3.054AspPhe: 3.054 ± 0.0
4.072AspGly: 4.072 ± 0.0
2.375AspHis: 2.375 ± 0.0
5.09AspIle: 5.09 ± 0.0
3.054AspLys: 3.054 ± 0.0
5.09AspLeu: 5.09 ± 0.0
1.018AspMet: 1.018 ± 0.0
2.036AspAsn: 2.036 ± 0.0
2.715AspPro: 2.715 ± 0.0
2.036AspGln: 2.036 ± 0.0
2.036AspArg: 2.036 ± 0.0
1.697AspSer: 1.697 ± 0.0
2.375AspThr: 2.375 ± 0.0
5.429AspVal: 5.429 ± 0.0
0.339AspTrp: 0.339 ± 0.0
2.036AspTyr: 2.036 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.751GluAla: 4.751 ± 0.0
0.0GluCys: 0.0 ± 0.0
3.054GluAsp: 3.054 ± 0.0
3.393GluGlu: 3.393 ± 0.0
2.715GluPhe: 2.715 ± 0.0
2.715GluGly: 2.715 ± 0.0
1.018GluHis: 1.018 ± 0.0
3.393GluIle: 3.393 ± 0.0
4.072GluLys: 4.072 ± 0.0
6.108GluLeu: 6.108 ± 0.0
0.679GluMet: 0.679 ± 0.0
2.036GluAsn: 2.036 ± 0.0
2.715GluPro: 2.715 ± 0.0
0.679GluGln: 0.679 ± 0.0
0.679GluArg: 0.679 ± 0.0
2.036GluSer: 2.036 ± 0.0
4.411GluThr: 4.411 ± 0.0
1.697GluVal: 1.697 ± 0.0
1.697GluTrp: 1.697 ± 0.0
2.375GluTyr: 2.375 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.733PheAla: 3.733 ± 0.0
1.018PheCys: 1.018 ± 0.0
3.393PheAsp: 3.393 ± 0.0
2.036PheGlu: 2.036 ± 0.0
1.357PhePhe: 1.357 ± 0.0
2.715PheGly: 2.715 ± 0.0
0.679PheHis: 0.679 ± 0.0
0.679PheIle: 0.679 ± 0.0
2.036PheLys: 2.036 ± 0.0
2.375PheLeu: 2.375 ± 0.0
1.018PheMet: 1.018 ± 0.0
2.036PheAsn: 2.036 ± 0.0
3.733PhePro: 3.733 ± 0.0
1.697PheGln: 1.697 ± 0.0
2.036PheArg: 2.036 ± 0.0
4.072PheSer: 4.072 ± 0.0
3.733PheThr: 3.733 ± 0.0
3.733PheVal: 3.733 ± 0.0
0.339PheTrp: 0.339 ± 0.0
2.036PheTyr: 2.036 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
5.769GlyAla: 5.769 ± 0.0
0.339GlyCys: 0.339 ± 0.0
3.733GlyAsp: 3.733 ± 0.0
2.715GlyGlu: 2.715 ± 0.0
2.375GlyPhe: 2.375 ± 0.0
3.393GlyGly: 3.393 ± 0.0
1.018GlyHis: 1.018 ± 0.0
3.733GlyIle: 3.733 ± 0.0
1.697GlyLys: 1.697 ± 0.0
4.072GlyLeu: 4.072 ± 0.0
3.393GlyMet: 3.393 ± 0.0
2.715GlyAsn: 2.715 ± 0.0
3.733GlyPro: 3.733 ± 0.0
3.054GlyGln: 3.054 ± 0.0
2.375GlyArg: 2.375 ± 0.0
5.429GlySer: 5.429 ± 0.0
4.072GlyThr: 4.072 ± 0.0
4.411GlyVal: 4.411 ± 0.0
0.679GlyTrp: 0.679 ± 0.0
1.357GlyTyr: 1.357 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.018HisAla: 1.018 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.339HisAsp: 0.339 ± 0.0
0.679HisGlu: 0.679 ± 0.0
0.679HisPhe: 0.679 ± 0.0
2.375HisGly: 2.375 ± 0.0
0.339HisHis: 0.339 ± 0.0
1.357HisIle: 1.357 ± 0.0
2.036HisLys: 2.036 ± 0.0
3.054HisLeu: 3.054 ± 0.0
1.018HisMet: 1.018 ± 0.0
1.018HisAsn: 1.018 ± 0.0
1.697HisPro: 1.697 ± 0.0
1.697HisGln: 1.697 ± 0.0
0.679HisArg: 0.679 ± 0.0
2.375HisSer: 2.375 ± 0.0
1.018HisThr: 1.018 ± 0.0
1.357HisVal: 1.357 ± 0.0
0.339HisTrp: 0.339 ± 0.0
0.679HisTyr: 0.679 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.411IleAla: 4.411 ± 0.0
0.0IleCys: 0.0 ± 0.0
3.733IleAsp: 3.733 ± 0.0
2.375IleGlu: 2.375 ± 0.0
2.036IlePhe: 2.036 ± 0.0
2.375IleGly: 2.375 ± 0.0
1.018IleHis: 1.018 ± 0.0
6.447IleIle: 6.447 ± 0.0
2.715IleLys: 2.715 ± 0.0
6.108IleLeu: 6.108 ± 0.0
2.375IleMet: 2.375 ± 0.0
4.411IleAsn: 4.411 ± 0.0
2.715IlePro: 2.715 ± 0.0
2.715IleGln: 2.715 ± 0.0
4.072IleArg: 4.072 ± 0.0
3.733IleSer: 3.733 ± 0.0
7.465IleThr: 7.465 ± 0.0
3.733IleVal: 3.733 ± 0.0
0.339IleTrp: 0.339 ± 0.0
3.054IleTyr: 3.054 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.375LysAla: 2.375 ± 0.0
1.018LysCys: 1.018 ± 0.0
5.429LysAsp: 5.429 ± 0.0
3.054LysGlu: 3.054 ± 0.0
2.715LysPhe: 2.715 ± 0.0
1.697LysGly: 1.697 ± 0.0
1.697LysHis: 1.697 ± 0.0
4.751LysIle: 4.751 ± 0.0
3.393LysLys: 3.393 ± 0.0
3.733LysLeu: 3.733 ± 0.0
1.018LysMet: 1.018 ± 0.0
2.715LysAsn: 2.715 ± 0.0
2.036LysPro: 2.036 ± 0.0
3.054LysGln: 3.054 ± 0.0
1.697LysArg: 1.697 ± 0.0
2.715LysSer: 2.715 ± 0.0
5.429LysThr: 5.429 ± 0.0
2.715LysVal: 2.715 ± 0.0
0.339LysTrp: 0.339 ± 0.0
1.357LysTyr: 1.357 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
9.162LeuAla: 9.162 ± 0.0
0.679LeuCys: 0.679 ± 0.0
4.072LeuAsp: 4.072 ± 0.0
5.09LeuGlu: 5.09 ± 0.0
3.733LeuPhe: 3.733 ± 0.0
4.072LeuGly: 4.072 ± 0.0
4.072LeuHis: 4.072 ± 0.0
2.375LeuIle: 2.375 ± 0.0
5.429LeuLys: 5.429 ± 0.0
5.429LeuLeu: 5.429 ± 0.0
1.697LeuMet: 1.697 ± 0.0
4.751LeuAsn: 4.751 ± 0.0
2.715LeuPro: 2.715 ± 0.0
5.769LeuGln: 5.769 ± 0.0
3.393LeuArg: 3.393 ± 0.0
7.805LeuSer: 7.805 ± 0.0
4.751LeuThr: 4.751 ± 0.0
4.072LeuVal: 4.072 ± 0.0
0.339LeuTrp: 0.339 ± 0.0
1.357LeuTyr: 1.357 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.697MetAla: 1.697 ± 0.0
0.679MetCys: 0.679 ± 0.0
1.697MetAsp: 1.697 ± 0.0
0.339MetGlu: 0.339 ± 0.0
0.339MetPhe: 0.339 ± 0.0
2.715MetGly: 2.715 ± 0.0
0.0MetHis: 0.0 ± 0.0
1.697MetIle: 1.697 ± 0.0
2.036MetLys: 2.036 ± 0.0
2.375MetLeu: 2.375 ± 0.0
1.357MetMet: 1.357 ± 0.0
0.679MetAsn: 0.679 ± 0.0
1.018MetPro: 1.018 ± 0.0
1.357MetGln: 1.357 ± 0.0
1.357MetArg: 1.357 ± 0.0
2.036MetSer: 2.036 ± 0.0
1.357MetThr: 1.357 ± 0.0
2.375MetVal: 2.375 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.018MetTyr: 1.018 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
4.072AsnAla: 4.072 ± 0.0
0.339AsnCys: 0.339 ± 0.0
1.697AsnAsp: 1.697 ± 0.0
3.054AsnGlu: 3.054 ± 0.0
2.036AsnPhe: 2.036 ± 0.0
3.393AsnGly: 3.393 ± 0.0
0.679AsnHis: 0.679 ± 0.0
2.375AsnIle: 2.375 ± 0.0
2.036AsnLys: 2.036 ± 0.0
3.733AsnLeu: 3.733 ± 0.0
2.375AsnMet: 2.375 ± 0.0
2.375AsnAsn: 2.375 ± 0.0
2.375AsnPro: 2.375 ± 0.0
3.733AsnGln: 3.733 ± 0.0
3.393AsnArg: 3.393 ± 0.0
3.393AsnSer: 3.393 ± 0.0
3.393AsnThr: 3.393 ± 0.0
4.072AsnVal: 4.072 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
1.018AsnTyr: 1.018 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.411ProAla: 4.411 ± 0.0
0.679ProCys: 0.679 ± 0.0
4.072ProAsp: 4.072 ± 0.0
3.733ProGlu: 3.733 ± 0.0
2.715ProPhe: 2.715 ± 0.0
1.357ProGly: 1.357 ± 0.0
0.679ProHis: 0.679 ± 0.0
4.072ProIle: 4.072 ± 0.0
1.357ProLys: 1.357 ± 0.0
2.715ProLeu: 2.715 ± 0.0
0.679ProMet: 0.679 ± 0.0
2.715ProAsn: 2.715 ± 0.0
1.018ProPro: 1.018 ± 0.0
2.036ProGln: 2.036 ± 0.0
3.054ProArg: 3.054 ± 0.0
5.429ProSer: 5.429 ± 0.0
4.411ProThr: 4.411 ± 0.0
2.036ProVal: 2.036 ± 0.0
0.339ProTrp: 0.339 ± 0.0
0.679ProTyr: 0.679 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
5.09GlnAla: 5.09 ± 0.0
0.339GlnCys: 0.339 ± 0.0
1.357GlnAsp: 1.357 ± 0.0
2.715GlnGlu: 2.715 ± 0.0
1.357GlnPhe: 1.357 ± 0.0
2.375GlnGly: 2.375 ± 0.0
1.018GlnHis: 1.018 ± 0.0
3.733GlnIle: 3.733 ± 0.0
1.357GlnLys: 1.357 ± 0.0
3.733GlnLeu: 3.733 ± 0.0
1.018GlnMet: 1.018 ± 0.0
2.715GlnAsn: 2.715 ± 0.0
3.054GlnPro: 3.054 ± 0.0
3.054GlnGln: 3.054 ± 0.0
1.357GlnArg: 1.357 ± 0.0
4.072GlnSer: 4.072 ± 0.0
3.393GlnThr: 3.393 ± 0.0
2.375GlnVal: 2.375 ± 0.0
0.339GlnTrp: 0.339 ± 0.0
1.357GlnTyr: 1.357 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.054ArgAla: 3.054 ± 0.0
0.339ArgCys: 0.339 ± 0.0
1.357ArgAsp: 1.357 ± 0.0
3.054ArgGlu: 3.054 ± 0.0
1.697ArgPhe: 1.697 ± 0.0
3.054ArgGly: 3.054 ± 0.0
1.018ArgHis: 1.018 ± 0.0
2.375ArgIle: 2.375 ± 0.0
2.715ArgLys: 2.715 ± 0.0
4.072ArgLeu: 4.072 ± 0.0
2.036ArgMet: 2.036 ± 0.0
2.715ArgAsn: 2.715 ± 0.0
3.054ArgPro: 3.054 ± 0.0
1.018ArgGln: 1.018 ± 0.0
3.393ArgArg: 3.393 ± 0.0
4.072ArgSer: 4.072 ± 0.0
3.733ArgThr: 3.733 ± 0.0
2.715ArgVal: 2.715 ± 0.0
1.018ArgTrp: 1.018 ± 0.0
2.715ArgTyr: 2.715 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.769SerAla: 5.769 ± 0.0
0.679SerCys: 0.679 ± 0.0
4.411SerAsp: 4.411 ± 0.0
3.393SerGlu: 3.393 ± 0.0
4.411SerPhe: 4.411 ± 0.0
4.411SerGly: 4.411 ± 0.0
1.018SerHis: 1.018 ± 0.0
6.108SerIle: 6.108 ± 0.0
4.072SerLys: 4.072 ± 0.0
6.108SerLeu: 6.108 ± 0.0
1.697SerMet: 1.697 ± 0.0
4.072SerAsn: 4.072 ± 0.0
3.393SerPro: 3.393 ± 0.0
2.375SerGln: 2.375 ± 0.0
5.429SerArg: 5.429 ± 0.0
5.429SerSer: 5.429 ± 0.0
5.09SerThr: 5.09 ± 0.0
6.447SerVal: 6.447 ± 0.0
1.357SerTrp: 1.357 ± 0.0
2.036SerTyr: 2.036 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.108ThrAla: 6.108 ± 0.0
1.018ThrCys: 1.018 ± 0.0
3.054ThrAsp: 3.054 ± 0.0
4.072ThrGlu: 4.072 ± 0.0
3.733ThrPhe: 3.733 ± 0.0
4.072ThrGly: 4.072 ± 0.0
1.018ThrHis: 1.018 ± 0.0
5.09ThrIle: 5.09 ± 0.0
3.054ThrLys: 3.054 ± 0.0
5.09ThrLeu: 5.09 ± 0.0
1.697ThrMet: 1.697 ± 0.0
2.375ThrAsn: 2.375 ± 0.0
3.393ThrPro: 3.393 ± 0.0
1.357ThrGln: 1.357 ± 0.0
2.715ThrArg: 2.715 ± 0.0
7.805ThrSer: 7.805 ± 0.0
7.465ThrThr: 7.465 ± 0.0
4.411ThrVal: 4.411 ± 0.0
2.036ThrTrp: 2.036 ± 0.0
2.375ThrTyr: 2.375 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.393ValAla: 3.393 ± 0.0
0.339ValCys: 0.339 ± 0.0
3.733ValAsp: 3.733 ± 0.0
3.733ValGlu: 3.733 ± 0.0
2.036ValPhe: 2.036 ± 0.0
4.072ValGly: 4.072 ± 0.0
1.018ValHis: 1.018 ± 0.0
5.09ValIle: 5.09 ± 0.0
5.769ValLys: 5.769 ± 0.0
5.769ValLeu: 5.769 ± 0.0
0.339ValMet: 0.339 ± 0.0
3.733ValAsn: 3.733 ± 0.0
1.697ValPro: 1.697 ± 0.0
3.393ValGln: 3.393 ± 0.0
4.411ValArg: 4.411 ± 0.0
6.787ValSer: 6.787 ± 0.0
3.393ValThr: 3.393 ± 0.0
6.447ValVal: 6.447 ± 0.0
0.339ValTrp: 0.339 ± 0.0
2.715ValTyr: 2.715 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.679TrpAla: 0.679 ± 0.0
0.339TrpCys: 0.339 ± 0.0
0.339TrpAsp: 0.339 ± 0.0
0.339TrpGlu: 0.339 ± 0.0
0.679TrpPhe: 0.679 ± 0.0
1.018TrpGly: 1.018 ± 0.0
0.339TrpHis: 0.339 ± 0.0
0.679TrpIle: 0.679 ± 0.0
0.679TrpLys: 0.679 ± 0.0
0.679TrpLeu: 0.679 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.679TrpPro: 0.679 ± 0.0
0.339TrpGln: 0.339 ± 0.0
0.679TrpArg: 0.679 ± 0.0
1.018TrpSer: 1.018 ± 0.0
0.679TrpThr: 0.679 ± 0.0
2.036TrpVal: 2.036 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.357TyrAla: 1.357 ± 0.0
0.339TyrCys: 0.339 ± 0.0
2.715TyrAsp: 2.715 ± 0.0
1.018TyrGlu: 1.018 ± 0.0
4.072TyrPhe: 4.072 ± 0.0
2.375TyrGly: 2.375 ± 0.0
0.679TyrHis: 0.679 ± 0.0
2.036TyrIle: 2.036 ± 0.0
0.679TyrLys: 0.679 ± 0.0
1.357TyrLeu: 1.357 ± 0.0
0.0TyrMet: 0.0 ± 0.0
1.697TyrAsn: 1.697 ± 0.0
1.697TyrPro: 1.697 ± 0.0
1.357TyrGln: 1.357 ± 0.0
2.715TyrArg: 2.715 ± 0.0
1.697TyrSer: 1.697 ± 0.0
1.018TyrThr: 1.018 ± 0.0
3.054TyrVal: 3.054 ± 0.0
0.339TyrTrp: 0.339 ± 0.0
1.018TyrTyr: 1.018 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2948 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski