Blautia sp. CAG:52
Average proteome isoelectric point is 6.05
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2465 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|R6G8M4|R6G8M4_9FIRM Uncharacterized protein OS=Blautia sp. CAG:52 OX=1262758 GN=BN690_00824 PE=4 SV=1
MM1 pKa = 7.29 KK2 pKa = 9.78 KK3 pKa = 10.03 KK4 pKa = 9.68 WMASTALACSCMLLISGCSGNKK26 pKa = 9.71 ADD28 pKa = 5.92 DD29 pKa = 3.98 FDD31 pKa = 4.89 AVAYY35 pKa = 5.98 TTAYY39 pKa = 9.51 LDD41 pKa = 3.33 GMIRR45 pKa = 11.84 GNVDD49 pKa = 3.33 TLSSLSGVSSDD60 pKa = 5.38 DD61 pKa = 3.2 LTATFNSMIDD71 pKa = 3.78 DD72 pKa = 4.53 LVSSSIGGDD81 pKa = 3.29 GSSPGSTQISPQLRR95 pKa = 11.84 QDD97 pKa = 3.4 YY98 pKa = 10.65 TDD100 pKa = 3.55 FWKK103 pKa = 10.7 QAFSNTKK110 pKa = 9.92 YY111 pKa = 10.38 DD112 pKa = 3.49 VKK114 pKa = 10.98 KK115 pKa = 10.73 ADD117 pKa = 3.79 KK118 pKa = 10.89 KK119 pKa = 10.43 EE120 pKa = 3.68 NTYY123 pKa = 10.81 QITVDD128 pKa = 3.63 TQQMQLYY135 pKa = 7.99 TAMEE139 pKa = 5.12 PIYY142 pKa = 10.26 DD143 pKa = 4.11 EE144 pKa = 5.26 KK145 pKa = 11.22 LADD148 pKa = 3.76 YY149 pKa = 11.0 LKK151 pKa = 10.98 DD152 pKa = 3.51 NSVDD156 pKa = 3.24 SDD158 pKa = 3.72 QYY160 pKa = 11.38 IEE162 pKa = 4.83 DD163 pKa = 4.15 VYY165 pKa = 11.83 SLMLEE170 pKa = 4.83 AYY172 pKa = 7.75 QTALDD177 pKa = 3.64 KK178 pKa = 11.58 AEE180 pKa = 4.21 YY181 pKa = 9.93 NDD183 pKa = 4.25 PEE185 pKa = 4.73 SVTVTLQKK193 pKa = 10.79 DD194 pKa = 3.91 DD195 pKa = 4.06 SEE197 pKa = 4.31 QWSISSDD204 pKa = 4.06 DD205 pKa = 3.42 MTTLKK210 pKa = 10.77 NALIDD215 pKa = 3.97 LASLNPSADD224 pKa = 3.36 GTTGTPAQVTAEE236 pKa = 4.96 DD237 pKa = 3.71 IANSQSEE244 pKa = 4.32 GAPNMEE250 pKa = 4.07 YY251 pKa = 10.15 PKK253 pKa = 10.68 DD254 pKa = 3.93 LEE256 pKa = 4.14 STPAYY261 pKa = 9.69 KK262 pKa = 10.66 VGDD265 pKa = 4.73 AITIQSDD272 pKa = 3.69 GKK274 pKa = 10.58 DD275 pKa = 3.28 VATFTIDD282 pKa = 3.18 KK283 pKa = 11.21 VEE285 pKa = 4.18 VTDD288 pKa = 5.81 DD289 pKa = 3.26 RR290 pKa = 11.84 SEE292 pKa = 4.4 YY293 pKa = 9.84 DD294 pKa = 2.97 TSNPDD299 pKa = 3.01 KK300 pKa = 11.07 VIVITYY306 pKa = 7.23 TYY308 pKa = 10.76 KK309 pKa = 10.86 NLAFDD314 pKa = 5.53 DD315 pKa = 4.48 PLLYY319 pKa = 10.74 DD320 pKa = 3.24 QMSFRR325 pKa = 11.84 VLDD328 pKa = 3.94 GDD330 pKa = 4.56 TVCLPYY336 pKa = 10.9 YY337 pKa = 10.44 LADD340 pKa = 3.69 LTSPDD345 pKa = 3.85 LATTGGDD352 pKa = 3.23 AVTATAAYY360 pKa = 9.22 GISASCNEE368 pKa = 3.47 VTIYY372 pKa = 11.17 VDD374 pKa = 4.01 GAQIAFPFQVSASVSS389 pKa = 3.32
Molecular weight: 42.26 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.673
IPC2_protein 3.757
IPC_protein 3.808
Toseland 3.567
ProMoST 3.986
Dawson 3.808
Bjellqvist 3.961
Wikipedia 3.77
Rodwell 3.617
Grimsley 3.465
Solomon 3.808
Lehninger 3.757
Nozaki 3.923
DTASelect 4.215
Thurlkill 3.617
EMBOSS 3.77
Sillero 3.923
Patrickios 1.38
IPC_peptide 3.795
IPC2_peptide 3.897
IPC2.peptide.svr19 3.836
Protein with the highest isoelectric point:
>tr|R6G8F1|R6G8F1_9FIRM HTH lysR-type domain-containing protein OS=Blautia sp. CAG:52 OX=1262758 GN=BN690_00792 PE=3 SV=1
MM1 pKa = 7.67 KK2 pKa = 8.72 MTFQPKK8 pKa = 8.86 KK9 pKa = 8.2 RR10 pKa = 11.84 SRR12 pKa = 11.84 AKK14 pKa = 9.27 VHH16 pKa = 5.81 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MSTKK25 pKa = 10.15 GGRR28 pKa = 11.84 KK29 pKa = 8.69 VLAARR34 pKa = 11.84 RR35 pKa = 11.84 LKK37 pKa = 10.56 GRR39 pKa = 11.84 KK40 pKa = 8.92 SLSAA44 pKa = 3.86
Molecular weight: 5.02 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.494
IPC2_protein 11.125
IPC_protein 12.691
Toseland 12.866
ProMoST 13.349
Dawson 12.866
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.676
Grimsley 12.896
Solomon 13.349
Lehninger 13.247
Nozaki 12.866
DTASelect 12.852
Thurlkill 12.866
EMBOSS 13.349
Sillero 12.866
Patrickios 12.398
IPC_peptide 13.349
IPC2_peptide 12.34
IPC2.peptide.svr19 9.084
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2465
0
2465
785732
29
2004
318.8
35.8
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.318 ± 0.048
1.556 ± 0.019
5.498 ± 0.04
7.89 ± 0.059
3.911 ± 0.037
7.355 ± 0.044
1.829 ± 0.02
7.044 ± 0.047
6.761 ± 0.045
8.879 ± 0.058
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.227 ± 0.027
3.999 ± 0.029
3.406 ± 0.026
3.642 ± 0.036
4.425 ± 0.038
5.421 ± 0.037
5.577 ± 0.039
7.05 ± 0.041
1.057 ± 0.021
4.156 ± 0.039
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here