Murine roseolovirus

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus; unclassified Roseolovirus

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 128 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1P8VIR2|A0A1P8VIR2_9BETA Uncharacterized protein OS=Murine roseolovirus OX=1940555 GN=ORF10 PE=4 SV=1
MM1 pKa = 7.98CYY3 pKa = 10.57HH4 pKa = 7.15MLPSHH9 pKa = 5.53QQEE12 pKa = 3.69EE13 pKa = 4.7MEE15 pKa = 4.54NNEE18 pKa = 4.15SSDD21 pKa = 3.77TVEE24 pKa = 4.38ATPSDD29 pKa = 3.84TDD31 pKa = 3.9QVSLPHH37 pKa = 6.71GNPDD41 pKa = 3.35SPTDD45 pKa = 3.5GTAYY49 pKa = 9.8PDD51 pKa = 3.84LHH53 pKa = 7.12DD54 pKa = 5.58LPPPIIDD61 pKa = 5.4PITGTVVLTLLEE73 pKa = 4.51MPAPPHH79 pKa = 6.87PPTPPPIPPRR89 pKa = 11.84TYY91 pKa = 9.93KK92 pKa = 10.62PMLITHH98 pKa = 6.54PEE100 pKa = 3.86EE101 pKa = 6.56DD102 pKa = 3.93EE103 pKa = 4.27EE104 pKa = 4.65QLDD107 pKa = 3.78RR108 pKa = 6.35

Molecular weight: 11.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1P8VIZ9|A0A1P8VIZ9_9BETA Uncharacterized protein OS=Murine roseolovirus OX=1940555 GN=ORF111 PE=4 SV=1
MM1 pKa = 7.82IDD3 pKa = 3.29TEE5 pKa = 4.66QFLEE9 pKa = 4.47CDD11 pKa = 3.46HH12 pKa = 6.23GHH14 pKa = 6.4CHH16 pKa = 6.68TIAISGNSADD26 pKa = 4.56LRR28 pKa = 11.84PLVAVRR34 pKa = 11.84FSFFVFRR41 pKa = 11.84ALFCHH46 pKa = 6.61HH47 pKa = 7.33GDD49 pKa = 3.91GPLPSPPPSPWQPLLPLRR67 pKa = 11.84AARR70 pKa = 11.84VTTVVLIRR78 pKa = 11.84TPPVRR83 pKa = 11.84LGCPLTGVAMIKK95 pKa = 8.37TAPVSAAAPLPCVSVSVSACRR116 pKa = 11.84CRR118 pKa = 11.84VSCVPSLGVSHH129 pKa = 7.21FSSSYY134 pKa = 10.42SSPLGPSPTPHH145 pKa = 7.31PSLTAAATSARR156 pKa = 11.84QTLAPSSHH164 pKa = 5.41GRR166 pKa = 11.84EE167 pKa = 3.98EE168 pKa = 3.83QTLDD172 pKa = 3.36FLQSRR177 pKa = 11.84DD178 pKa = 3.31RR179 pKa = 11.84DD180 pKa = 3.8FLTKK184 pKa = 10.3KK185 pKa = 10.08RR186 pKa = 11.84DD187 pKa = 3.56RR188 pKa = 11.84FQIWYY193 pKa = 9.4LPLNGSCCRR202 pKa = 11.84RR203 pKa = 11.84CCWTLCLTAKK213 pKa = 10.29PSVFSPSRR221 pKa = 11.84GCLWSAAVAAPPRR234 pKa = 11.84SSPTPPGALAAAPPAEE250 pKa = 4.74PGNRR254 pKa = 11.84SCGGPPPTNSGRR266 pKa = 11.84TSGPRR271 pKa = 11.84MIGCTTSRR279 pKa = 11.84LRR281 pKa = 11.84TGSAPCAPPCYY292 pKa = 9.88GVGASWPPPGPPGGACTWNRR312 pKa = 11.84TPTASAWPSTRR323 pKa = 11.84CPSPVSVSAGRR334 pKa = 11.84PSPGPPTRR342 pKa = 11.84WNLSVRR348 pKa = 11.84MLFPCLPLPKK358 pKa = 9.95FPFPPHH364 pKa = 6.94PSPTPLTSFVSACLSSAVSHH384 pKa = 5.98VVLSSGVVPLFGVSRR399 pKa = 11.84DD400 pKa = 3.66YY401 pKa = 11.37VPPRR405 pKa = 11.84RR406 pKa = 11.84VGGEE410 pKa = 3.53RR411 pKa = 11.84LVWFFCRR418 pKa = 11.84KK419 pKa = 8.39EE420 pKa = 3.96KK421 pKa = 9.55KK422 pKa = 8.01TCFSILSRR430 pKa = 11.84RR431 pKa = 11.84PLLSLLAPSRR441 pKa = 11.84SPLSVLCSPLAPSRR455 pKa = 11.84LPVRR459 pKa = 11.84IFPLSSPSLRR469 pKa = 11.84VPHH472 pKa = 6.34PHH474 pKa = 7.16PLSCLSLPRR483 pKa = 11.84SEE485 pKa = 4.46RR486 pKa = 11.84APIQVLWGHH495 pKa = 6.17RR496 pKa = 11.84VFLPGGLHH504 pKa = 6.18RR505 pKa = 11.84ASPRR509 pKa = 11.84AA510 pKa = 3.35

Molecular weight: 54.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

128

0

128

50423

105

2011

393.9

45.15

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.012 ± 0.237

2.303 ± 0.127

5.503 ± 0.186

5.648 ± 0.196

5.317 ± 0.195

4.155 ± 0.295

2.366 ± 0.097

8.611 ± 0.343

7.126 ± 0.275

9.101 ± 0.227

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.39 ± 0.092

6.715 ± 0.31

5.091 ± 0.408

3.407 ± 0.153

4.107 ± 0.258

8.012 ± 0.422

5.948 ± 0.177

5.053 ± 0.149

0.837 ± 0.056

4.298 ± 0.174
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski