Streptococcus virus 858

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Brussowvirus

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 46 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B0YL82|B0YL82_9CAUD Orf32 OS=Streptococcus virus 858 OX=459845 PE=4 SV=1
MM1 pKa = 7.13VNWVDD6 pKa = 4.56ANGNDD11 pKa = 4.18LPDD14 pKa = 4.84GADD17 pKa = 3.18QDD19 pKa = 4.92FKK21 pKa = 11.67AGMYY25 pKa = 10.17FSFSGDD31 pKa = 3.22EE32 pKa = 4.18TNITDD37 pKa = 3.65TGEE40 pKa = 3.72GGYY43 pKa = 10.61YY44 pKa = 9.76GGYY47 pKa = 8.0YY48 pKa = 9.41YY49 pKa = 10.76RR50 pKa = 11.84RR51 pKa = 11.84FEE53 pKa = 4.17FGQFGPVWLSCWNKK67 pKa = 10.66DD68 pKa = 3.89DD69 pKa = 5.14LVNYY73 pKa = 7.38YY74 pKa = 8.26QQ75 pKa = 4.22

Molecular weight: 8.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B0YL52|B0YL52_9CAUD Orf2 OS=Streptococcus virus 858 OX=459845 PE=4 SV=1
MM1 pKa = 6.88FVSWVKK7 pKa = 9.47TKK9 pKa = 10.51KK10 pKa = 9.95DD11 pKa = 3.14RR12 pKa = 11.84HH13 pKa = 5.0NCRR16 pKa = 11.84HH17 pKa = 4.94FMKK20 pKa = 10.63VNTTIISEE28 pKa = 4.24RR29 pKa = 11.84LVQCYY34 pKa = 8.99CRR36 pKa = 11.84KK37 pKa = 10.06LMRR40 pKa = 11.84KK41 pKa = 7.06QHH43 pKa = 6.18SNVANASFEE52 pKa = 4.43NIHH55 pKa = 6.89AGEE58 pKa = 4.18RR59 pKa = 11.84LHH61 pKa = 7.1TIALNRR67 pKa = 11.84KK68 pKa = 8.14

Molecular weight: 8.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

46

0

46

11098

40

1617

241.3

26.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.794 ± 1.213

0.595 ± 0.144

5.893 ± 0.454

6.398 ± 0.739

4.01 ± 0.18

7.109 ± 0.6

1.252 ± 0.176

6.713 ± 0.407

7.668 ± 0.678

7.38 ± 0.4

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.433 ± 0.292

5.668 ± 0.376

2.82 ± 0.277

3.766 ± 0.255

4.316 ± 0.421

7.272 ± 0.597

6.902 ± 0.46

6.695 ± 0.298

1.289 ± 0.21

4.028 ± 0.456
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski