Plantago asiatica mosaic potexvirus (P1AMV)

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Potexvirus

Average proteome isoelectric point is 7.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q07519|TGB2_P1AMV Movement protein TGB2 OS=Plantago asiatica mosaic potexvirus OX=28354 GN=ORF3 PE=3 SV=1
MM1 pKa = 7.36SNVRR5 pKa = 11.84NVFSQLTDD13 pKa = 3.73PSLKK17 pKa = 10.67AVIQDD22 pKa = 3.04EE23 pKa = 4.7AYY25 pKa = 9.93RR26 pKa = 11.84VLKK29 pKa = 10.79RR30 pKa = 11.84EE31 pKa = 4.11LAQTRR36 pKa = 11.84HH37 pKa = 5.62TNPFAQSPEE46 pKa = 3.88AADD49 pKa = 3.47ALEE52 pKa = 4.01ALGINSHH59 pKa = 7.12PYY61 pKa = 10.07AITSHH66 pKa = 4.72THH68 pKa = 5.37AAAKK72 pKa = 10.3AIEE75 pKa = 4.19SDD77 pKa = 3.32LYY79 pKa = 11.07EE80 pKa = 4.48VVSHH84 pKa = 6.29YY85 pKa = 10.61LPKK88 pKa = 10.33EE89 pKa = 3.99NPVSFLFMKK98 pKa = 9.83PAKK101 pKa = 10.18LRR103 pKa = 11.84FFHH106 pKa = 7.18RR107 pKa = 11.84GPTHH111 pKa = 6.89GDD113 pKa = 2.93HH114 pKa = 6.98FLNAHH119 pKa = 5.85VEE121 pKa = 4.32PKK123 pKa = 10.36DD124 pKa = 3.63VPRR127 pKa = 11.84YY128 pKa = 7.32PQEE131 pKa = 4.03TIINRR136 pKa = 11.84LADD139 pKa = 3.7IPTQIAFMGDD149 pKa = 3.21TLHH152 pKa = 6.77FLSPSFLTALFAHH165 pKa = 6.62SPRR168 pKa = 11.84LQTLYY173 pKa = 9.97ATLVLPPEE181 pKa = 4.68PSTSRR186 pKa = 11.84SLYY189 pKa = 7.71PQIYY193 pKa = 7.8TLTYY197 pKa = 9.98SEE199 pKa = 5.37DD200 pKa = 3.11GFMYY204 pKa = 10.31IPGGHH209 pKa = 6.81AGASYY214 pKa = 9.36FHH216 pKa = 7.49KK217 pKa = 10.5YY218 pKa = 9.84DD219 pKa = 3.33QLEE222 pKa = 4.31WLTVGHH228 pKa = 6.85LTAPGCPTVTAQRR241 pKa = 11.84LEE243 pKa = 4.45TKK245 pKa = 10.02GANHH249 pKa = 7.04LFIFQRR255 pKa = 11.84GNYY258 pKa = 6.08ITPEE262 pKa = 3.63RR263 pKa = 11.84RR264 pKa = 11.84TFATNDD270 pKa = 3.18QYY272 pKa = 11.39VTVPHH277 pKa = 6.85IFLPEE282 pKa = 3.97NYY284 pKa = 9.63NCRR287 pKa = 11.84TPISKK292 pKa = 7.7TTMMQMFFYY301 pKa = 10.35IKK303 pKa = 10.0SGKK306 pKa = 7.72EE307 pKa = 3.75AQRR310 pKa = 11.84EE311 pKa = 4.1GHH313 pKa = 6.92LGQVQQLISTKK324 pKa = 9.37EE325 pKa = 3.83LQHH328 pKa = 5.56YY329 pKa = 8.69QPSEE333 pKa = 3.44ITLLVNYY340 pKa = 9.83FEE342 pKa = 4.74FTATLDD348 pKa = 3.38SHH350 pKa = 6.48TCFEE354 pKa = 4.7DD355 pKa = 3.9VPPKK359 pKa = 10.19LAPKK363 pKa = 7.39TTPAPPLGISRR374 pKa = 11.84ILQFFRR380 pKa = 11.84GRR382 pKa = 11.84PSFVKK387 pKa = 10.63LIKK390 pKa = 10.78ALDD393 pKa = 3.62WQPITLEE400 pKa = 3.9FPVRR404 pKa = 11.84DD405 pKa = 2.97VRR407 pKa = 11.84TTVRR411 pKa = 11.84GPPGFKK417 pKa = 10.69NPFTQPQPVNPEE429 pKa = 3.94DD430 pKa = 4.41ADD432 pKa = 3.47ISSRR436 pKa = 11.84FQDD439 pKa = 4.02FSRR442 pKa = 11.84ATNSTPKK449 pKa = 8.97PTVEE453 pKa = 4.06AVLEE457 pKa = 4.26ASAEE461 pKa = 4.38SPDD464 pKa = 3.27HH465 pKa = 5.65HH466 pKa = 6.62TQLKK470 pKa = 8.38VLCSALSEE478 pKa = 4.33GQLEE482 pKa = 4.71AIHH485 pKa = 6.6ALGHH489 pKa = 5.42SRR491 pKa = 11.84CGGPLLPEE499 pKa = 4.54LTAKK503 pKa = 8.22STPVEE508 pKa = 4.07QCPDD512 pKa = 3.91LPPCPTKK519 pKa = 10.81SQASPASSNPSGPDD533 pKa = 3.37AQPTAQNPEE542 pKa = 4.1TLPWVAWLPKK552 pKa = 10.19LNALGFEE559 pKa = 4.23ALEE562 pKa = 4.26VQHH565 pKa = 6.96DD566 pKa = 4.02PSTGEE571 pKa = 3.96MIMPITDD578 pKa = 3.57TQEE581 pKa = 3.91LPRR584 pKa = 11.84ATLPAHH590 pKa = 5.4WQGHH594 pKa = 4.66NLEE597 pKa = 5.54RR598 pKa = 11.84ILSTLRR604 pKa = 11.84SLNRR608 pKa = 11.84FPTPWSPDD616 pKa = 2.89RR617 pKa = 11.84TRR619 pKa = 11.84ARR621 pKa = 11.84AFTSDD626 pKa = 3.48VKK628 pKa = 11.08NSRR631 pKa = 11.84TGKK634 pKa = 9.17ALHH637 pKa = 6.88RR638 pKa = 11.84EE639 pKa = 4.03SQTWKK644 pKa = 8.84EE645 pKa = 4.27TQTMLTEE652 pKa = 4.09NTQTEE657 pKa = 4.15LAISVIHH664 pKa = 6.17GAGGSGKK671 pKa = 9.61SQALQTLLRR680 pKa = 11.84QDD682 pKa = 3.21HH683 pKa = 6.32SLPIEE688 pKa = 4.21VVLPTNEE695 pKa = 5.49LRR697 pKa = 11.84LDD699 pKa = 3.6WLKK702 pKa = 10.94KK703 pKa = 10.15LPHH706 pKa = 6.44NPPEE710 pKa = 3.84QFRR713 pKa = 11.84TFEE716 pKa = 3.92RR717 pKa = 11.84AFVSSHH723 pKa = 5.64SPVVIFDD730 pKa = 4.89DD731 pKa = 4.56YY732 pKa = 12.01GKK734 pKa = 10.67LPQGYY739 pKa = 9.41LEE741 pKa = 5.01AFALTHH747 pKa = 6.82ANLEE751 pKa = 4.31LVILTGDD758 pKa = 3.66PRR760 pKa = 11.84QSTHH764 pKa = 6.54HH765 pKa = 6.38EE766 pKa = 4.49SNEE769 pKa = 3.55EE770 pKa = 3.82ALISKK775 pKa = 8.52LPPATTIYY783 pKa = 10.61SAFSRR788 pKa = 11.84YY789 pKa = 9.46YY790 pKa = 10.3INATLRR796 pKa = 11.84NSKK799 pKa = 10.16FLANKK804 pKa = 9.92LGVYY808 pKa = 9.43SANSCPLNVTYY819 pKa = 10.46GFQPLPGLHH828 pKa = 6.73LLVPSLMKK836 pKa = 10.54KK837 pKa = 10.14AAFTDD842 pKa = 3.54AGHH845 pKa = 6.48KK846 pKa = 8.81VSSYY850 pKa = 10.99AGCQGITAPKK860 pKa = 9.87VQILLDD866 pKa = 4.13NDD868 pKa = 3.44TTMCTKK874 pKa = 10.33EE875 pKa = 3.99VLYY878 pKa = 9.53TALSRR883 pKa = 11.84AVDD886 pKa = 3.91SIHH889 pKa = 6.59FVNTNAQSSAFWEE902 pKa = 4.27KK903 pKa = 11.34LEE905 pKa = 3.97ATPYY909 pKa = 10.92LKK911 pKa = 9.9TFLSLVRR918 pKa = 11.84EE919 pKa = 4.2DD920 pKa = 5.59KK921 pKa = 10.14ITEE924 pKa = 4.1FQAPADD930 pKa = 3.76APKK933 pKa = 10.26PVTPPVTHH941 pKa = 6.69FPVEE945 pKa = 4.42EE946 pKa = 4.17PATTLDD952 pKa = 3.73DD953 pKa = 4.28FKK955 pKa = 11.74EE956 pKa = 4.05EE957 pKa = 4.5LRR959 pKa = 11.84DD960 pKa = 3.59KK961 pKa = 10.66FDD963 pKa = 4.55RR964 pKa = 11.84EE965 pKa = 4.02IFTSDD970 pKa = 3.38RR971 pKa = 11.84GHH973 pKa = 6.15TNCVQTDD980 pKa = 3.72DD981 pKa = 4.24PTTQLFSHH989 pKa = 5.86QQAKK993 pKa = 10.86DD994 pKa = 3.4EE995 pKa = 4.3ALLWEE1000 pKa = 4.93MIRR1003 pKa = 11.84ARR1005 pKa = 11.84LKK1007 pKa = 10.62ISTPEE1012 pKa = 3.72ANIEE1016 pKa = 3.87EE1017 pKa = 4.21FRR1019 pKa = 11.84AKK1021 pKa = 10.32KK1022 pKa = 10.38DD1023 pKa = 3.21LGDD1026 pKa = 3.9ILWVNYY1032 pKa = 8.42HH1033 pKa = 6.64RR1034 pKa = 11.84AMGLPKK1040 pKa = 9.76EE1041 pKa = 4.22QPDD1044 pKa = 4.01FSEE1047 pKa = 5.16DD1048 pKa = 2.83LWNRR1052 pKa = 11.84CAEE1055 pKa = 4.26EE1056 pKa = 4.0VQNTYY1061 pKa = 10.35LKK1063 pKa = 9.86KK1064 pKa = 9.47TMAQLKK1070 pKa = 9.72GGEE1073 pKa = 4.2RR1074 pKa = 11.84RR1075 pKa = 11.84QSPDD1079 pKa = 2.8FHH1081 pKa = 6.51EE1082 pKa = 4.28HH1083 pKa = 6.21QILIFLKK1090 pKa = 9.24SQWVKK1095 pKa = 11.13KK1096 pKa = 8.03MEE1098 pKa = 4.12KK1099 pKa = 10.31LGAKK1103 pKa = 9.14EE1104 pKa = 3.91IKK1106 pKa = 9.72PGQTIASFQQHH1117 pKa = 5.57AVMLYY1122 pKa = 8.44GTMARR1127 pKa = 11.84YY1128 pKa = 7.8MRR1130 pKa = 11.84RR1131 pKa = 11.84FRR1133 pKa = 11.84DD1134 pKa = 3.29ALSPNNIMINCEE1146 pKa = 3.97KK1147 pKa = 10.25TPQDD1151 pKa = 3.33LSRR1154 pKa = 11.84WVLNYY1159 pKa = 9.73WDD1161 pKa = 4.51FSKK1164 pKa = 10.74PSYY1167 pKa = 11.38ANDD1170 pKa = 3.11FTAFDD1175 pKa = 3.83QSQDD1179 pKa = 3.0GAMLQFEE1186 pKa = 4.46ILKK1189 pKa = 10.42AKK1191 pKa = 10.13YY1192 pKa = 9.62FNLPEE1197 pKa = 4.07WVIEE1201 pKa = 4.53GYY1203 pKa = 11.05LDD1205 pKa = 3.28IKK1207 pKa = 10.77LSPKK1211 pKa = 10.02IFLGTLSIMRR1221 pKa = 11.84LTGEE1225 pKa = 4.65GPTFDD1230 pKa = 6.01ANTEE1234 pKa = 4.01CNIAYY1239 pKa = 6.91THH1241 pKa = 5.92TRR1243 pKa = 11.84FDD1245 pKa = 3.64IPEE1248 pKa = 4.23GTAQIYY1254 pKa = 10.83AGDD1257 pKa = 4.13DD1258 pKa = 3.36CAIAQVCPEE1267 pKa = 4.41KK1268 pKa = 10.73PSFALLKK1275 pKa = 10.76NRR1277 pKa = 11.84IALQAKK1283 pKa = 8.7PAYY1286 pKa = 8.31TPQEE1290 pKa = 3.93RR1291 pKa = 11.84GQWAEE1296 pKa = 3.63FCGYY1300 pKa = 10.67LITPKK1305 pKa = 10.87GLIKK1309 pKa = 10.8DD1310 pKa = 3.83PLKK1313 pKa = 10.94LHH1315 pKa = 7.1ASLEE1319 pKa = 4.11LAKK1322 pKa = 10.14AQKK1325 pKa = 10.13KK1326 pKa = 10.46AGVRR1330 pKa = 11.84DD1331 pKa = 4.36AITNVVANYY1340 pKa = 10.89SLDD1343 pKa = 3.57AKK1345 pKa = 10.47LAYY1348 pKa = 10.44SLGDD1352 pKa = 3.86DD1353 pKa = 4.29LQDD1356 pKa = 4.47LLSPHH1361 pKa = 6.0QAHH1364 pKa = 6.71LHH1366 pKa = 4.51QVTVRR1371 pKa = 11.84DD1372 pKa = 3.58LVKK1375 pKa = 10.77FGGSPFLNSDD1385 pKa = 3.09

Molecular weight: 155.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q07520|TGB3_P1AMV Movement protein TGBp3 OS=Plantago asiatica mosaic potexvirus OX=28354 GN=ORF4 PE=3 SV=1
MM1 pKa = 7.51SGAHH5 pKa = 6.61HH6 pKa = 6.84LTPPTDD12 pKa = 3.28YY13 pKa = 11.02GKK15 pKa = 9.7PVLAASIGISLALLVYY31 pKa = 8.77TATRR35 pKa = 11.84STLPHH40 pKa = 6.71VGDD43 pKa = 3.98NLHH46 pKa = 6.72ALPHH50 pKa = 6.15GGRR53 pKa = 11.84YY54 pKa = 9.33VDD56 pKa = 3.65GTKK59 pKa = 10.35SISYY63 pKa = 8.12FSPSASKK70 pKa = 9.49TRR72 pKa = 11.84DD73 pKa = 3.36PFPFAFLLILTLSGLILLLSRR94 pKa = 11.84RR95 pKa = 11.84RR96 pKa = 11.84SNPHH100 pKa = 5.81SCPSCGTPHH109 pKa = 7.11AA110 pKa = 5.04

Molecular weight: 11.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

2053

110

1385

410.6

45.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.206 ± 1.201

1.364 ± 0.188

4.384 ± 0.54

4.871 ± 1.122

4.676 ± 0.508

4.92 ± 0.381

3.653 ± 0.517

4.384 ± 0.29

4.433 ± 1.046

11.057 ± 0.815

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.315 ± 0.281

3.702 ± 0.214

8.475 ± 0.692

4.53 ± 0.772

4.579 ± 0.152

7.745 ± 1.278

8.475 ± 0.7

4.627 ± 0.262

0.974 ± 0.252

2.63 ± 0.504
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski