Drosophila innubila nudivirus

Taxonomy: Viruses; Naldaviricetes; Lefavirales; Nudiviridae; Alphanudivirus

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 106 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4UXE5|A0A2H4UXE5_9VIRU Ac146-like protein OS=Drosophila innubila nudivirus OX=2057187 GN=DiNV_CH01M_ORF96 PE=4 SV=1
MM1 pKa = 7.75FDD3 pKa = 2.97GCLVVFVVVVANVVVVVFGFIVVDD27 pKa = 3.56VVNVVVVVFGFIVVVVDD44 pKa = 3.54VVDD47 pKa = 3.88VVDD50 pKa = 3.84VVVVVVGGDD59 pKa = 3.32GGGGFVDD66 pKa = 4.31VINFVVVDD74 pKa = 4.64CIGVVCNCVVAAICDD89 pKa = 3.55AATVLSVVLVLVLVLIIDD107 pKa = 4.11GVVVVVICDD116 pKa = 3.27AATVLSVVLVLVLVLIVDD134 pKa = 4.27GVVVVVVEE142 pKa = 5.49FIIGTFTVVALLFKK156 pKa = 10.12FSIVISLFSAGSIIGVVGFAIEE178 pKa = 4.07VDD180 pKa = 4.08VVALFFFLFRR190 pKa = 11.84CC191 pKa = 4.07

Molecular weight: 19.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4UXB1|A0A2H4UXB1_9VIRU P74 OS=Drosophila innubila nudivirus OX=2057187 GN=DiNV_CH01M_ORF67 PE=4 SV=1
MM1 pKa = 7.23MMMILKK7 pKa = 7.97MIPLLLLVVVAVAVIVIPVVAIVKK31 pKa = 7.23MTIFLMTTPMMTMMTTMMMMRR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84MKK56 pKa = 9.68MMAIVTILKK65 pKa = 10.23RR66 pKa = 11.84KK67 pKa = 8.65IIPWKK72 pKa = 8.97MILMVQMIVYY82 pKa = 8.09MIYY85 pKa = 10.12MNDD88 pKa = 2.74IFNVQKK94 pKa = 10.65RR95 pKa = 11.84ICIKK99 pKa = 10.75NLILLEE105 pKa = 3.9TRR107 pKa = 11.84ICHH110 pKa = 5.77ILFRR114 pKa = 11.84SLMVSMLSTIKK125 pKa = 10.31CVRR128 pKa = 11.84ILTLRR133 pKa = 11.84NLIEE137 pKa = 4.42MLHH140 pKa = 6.36CLNITLYY147 pKa = 10.87VITWMLQNLQLIYY160 pKa = 11.06

Molecular weight: 19.01 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

106

0

106

37911

50

1549

357.7

40.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.162 ± 0.134

1.97 ± 0.097

6.455 ± 0.269

4.795 ± 0.127

4.205 ± 0.137

3.366 ± 0.212

2.044 ± 0.098

9.174 ± 0.227

6.61 ± 0.159

8.05 ± 0.216

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.78 ± 0.108

9.451 ± 0.211

3.917 ± 0.131

3.925 ± 0.263

3.827 ± 0.129

7.966 ± 0.235

7.09 ± 0.278

4.977 ± 0.228

0.578 ± 0.048

4.656 ± 0.194
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski