Amino acid dipepetide frequency for Beihai hypo-like virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.109AlaAla: 4.109 ± 0.0
0.948AlaCys: 0.948 ± 0.0
3.793AlaAsp: 3.793 ± 0.0
4.109AlaGlu: 4.109 ± 0.0
2.845AlaPhe: 2.845 ± 0.0
5.057AlaGly: 5.057 ± 0.0
2.528AlaHis: 2.528 ± 0.0
6.005AlaIle: 6.005 ± 0.0
3.793AlaLys: 3.793 ± 0.0
5.373AlaLeu: 5.373 ± 0.0
3.793AlaMet: 3.793 ± 0.0
2.845AlaAsn: 2.845 ± 0.0
1.58AlaPro: 1.58 ± 0.0
1.58AlaGln: 1.58 ± 0.0
2.845AlaArg: 2.845 ± 0.0
4.109AlaSer: 4.109 ± 0.0
6.321AlaThr: 6.321 ± 0.0
3.477AlaVal: 3.477 ± 0.0
1.58AlaTrp: 1.58 ± 0.0
2.212AlaTyr: 2.212 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.264CysAla: 1.264 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.948CysAsp: 0.948 ± 0.0
0.948CysGlu: 0.948 ± 0.0
0.316CysPhe: 0.316 ± 0.0
1.264CysGly: 1.264 ± 0.0
0.316CysHis: 0.316 ± 0.0
1.58CysIle: 1.58 ± 0.0
0.948CysLys: 0.948 ± 0.0
0.316CysLeu: 0.316 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.632CysAsn: 0.632 ± 0.0
0.316CysPro: 0.316 ± 0.0
0.632CysGln: 0.632 ± 0.0
1.58CysArg: 1.58 ± 0.0
1.264CysSer: 1.264 ± 0.0
0.632CysThr: 0.632 ± 0.0
1.58CysVal: 1.58 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.896CysTyr: 1.896 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.477AspAla: 3.477 ± 0.0
0.632AspCys: 0.632 ± 0.0
6.005AspAsp: 6.005 ± 0.0
5.373AspGlu: 5.373 ± 0.0
2.528AspPhe: 2.528 ± 0.0
5.057AspGly: 5.057 ± 0.0
0.948AspHis: 0.948 ± 0.0
4.109AspIle: 4.109 ± 0.0
2.845AspLys: 2.845 ± 0.0
6.321AspLeu: 6.321 ± 0.0
2.528AspMet: 2.528 ± 0.0
2.212AspAsn: 2.212 ± 0.0
2.528AspPro: 2.528 ± 0.0
1.58AspGln: 1.58 ± 0.0
1.896AspArg: 1.896 ± 0.0
2.528AspSer: 2.528 ± 0.0
1.896AspThr: 1.896 ± 0.0
3.161AspVal: 3.161 ± 0.0
2.845AspTrp: 2.845 ± 0.0
2.212AspTyr: 2.212 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.109GluAla: 4.109 ± 0.0
1.896GluCys: 1.896 ± 0.0
1.264GluAsp: 1.264 ± 0.0
1.896GluGlu: 1.896 ± 0.0
1.264GluPhe: 1.264 ± 0.0
1.896GluGly: 1.896 ± 0.0
1.58GluHis: 1.58 ± 0.0
4.109GluIle: 4.109 ± 0.0
1.896GluLys: 1.896 ± 0.0
4.741GluLeu: 4.741 ± 0.0
1.896GluMet: 1.896 ± 0.0
1.264GluAsn: 1.264 ± 0.0
2.212GluPro: 2.212 ± 0.0
1.896GluGln: 1.896 ± 0.0
4.109GluArg: 4.109 ± 0.0
2.845GluSer: 2.845 ± 0.0
2.528GluThr: 2.528 ± 0.0
1.264GluVal: 1.264 ± 0.0
1.58GluTrp: 1.58 ± 0.0
2.845GluTyr: 2.845 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.793PheAla: 3.793 ± 0.0
0.316PheCys: 0.316 ± 0.0
3.477PheAsp: 3.477 ± 0.0
3.161PheGlu: 3.161 ± 0.0
0.632PhePhe: 0.632 ± 0.0
3.793PheGly: 3.793 ± 0.0
0.0PheHis: 0.0 ± 0.0
2.212PheIle: 2.212 ± 0.0
1.896PheLys: 1.896 ± 0.0
1.896PheLeu: 1.896 ± 0.0
0.316PheMet: 0.316 ± 0.0
1.58PheAsn: 1.58 ± 0.0
1.264PhePro: 1.264 ± 0.0
1.896PheGln: 1.896 ± 0.0
1.58PheArg: 1.58 ± 0.0
3.793PheSer: 3.793 ± 0.0
2.212PheThr: 2.212 ± 0.0
3.793PheVal: 3.793 ± 0.0
0.632PheTrp: 0.632 ± 0.0
0.316PheTyr: 0.316 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.528GlyAla: 2.528 ± 0.0
0.632GlyCys: 0.632 ± 0.0
4.741GlyAsp: 4.741 ± 0.0
2.845GlyGlu: 2.845 ± 0.0
2.212GlyPhe: 2.212 ± 0.0
3.161GlyGly: 3.161 ± 0.0
0.948GlyHis: 0.948 ± 0.0
4.425GlyIle: 4.425 ± 0.0
4.741GlyLys: 4.741 ± 0.0
7.585GlyLeu: 7.585 ± 0.0
1.58GlyMet: 1.58 ± 0.0
1.264GlyAsn: 1.264 ± 0.0
2.845GlyPro: 2.845 ± 0.0
0.632GlyGln: 0.632 ± 0.0
5.689GlyArg: 5.689 ± 0.0
3.477GlySer: 3.477 ± 0.0
6.637GlyThr: 6.637 ± 0.0
4.741GlyVal: 4.741 ± 0.0
0.948GlyTrp: 0.948 ± 0.0
2.845GlyTyr: 2.845 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.528HisAla: 2.528 ± 0.0
0.316HisCys: 0.316 ± 0.0
0.948HisAsp: 0.948 ± 0.0
1.58HisGlu: 1.58 ± 0.0
0.948HisPhe: 0.948 ± 0.0
1.58HisGly: 1.58 ± 0.0
0.632HisHis: 0.632 ± 0.0
2.528HisIle: 2.528 ± 0.0
1.58HisLys: 1.58 ± 0.0
1.896HisLeu: 1.896 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.58HisAsn: 1.58 ± 0.0
1.58HisPro: 1.58 ± 0.0
1.58HisGln: 1.58 ± 0.0
1.58HisArg: 1.58 ± 0.0
0.948HisSer: 0.948 ± 0.0
0.316HisThr: 0.316 ± 0.0
1.896HisVal: 1.896 ± 0.0
0.316HisTrp: 0.316 ± 0.0
0.316HisTyr: 0.316 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
6.637IleAla: 6.637 ± 0.0
0.948IleCys: 0.948 ± 0.0
6.321IleAsp: 6.321 ± 0.0
2.528IleGlu: 2.528 ± 0.0
2.528IlePhe: 2.528 ± 0.0
3.161IleGly: 3.161 ± 0.0
2.212IleHis: 2.212 ± 0.0
5.057IleIle: 5.057 ± 0.0
2.528IleLys: 2.528 ± 0.0
8.217IleLeu: 8.217 ± 0.0
1.264IleMet: 1.264 ± 0.0
2.528IleAsn: 2.528 ± 0.0
4.741IlePro: 4.741 ± 0.0
1.264IleGln: 1.264 ± 0.0
3.477IleArg: 3.477 ± 0.0
3.477IleSer: 3.477 ± 0.0
5.689IleThr: 5.689 ± 0.0
5.057IleVal: 5.057 ± 0.0
0.316IleTrp: 0.316 ± 0.0
1.58IleTyr: 1.58 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.528LysAla: 2.528 ± 0.0
1.896LysCys: 1.896 ± 0.0
1.896LysAsp: 1.896 ± 0.0
2.845LysGlu: 2.845 ± 0.0
1.58LysPhe: 1.58 ± 0.0
5.057LysGly: 5.057 ± 0.0
1.58LysHis: 1.58 ± 0.0
3.161LysIle: 3.161 ± 0.0
4.425LysLys: 4.425 ± 0.0
5.373LysLeu: 5.373 ± 0.0
1.896LysMet: 1.896 ± 0.0
1.58LysAsn: 1.58 ± 0.0
2.845LysPro: 2.845 ± 0.0
0.948LysGln: 0.948 ± 0.0
4.741LysArg: 4.741 ± 0.0
3.793LysSer: 3.793 ± 0.0
3.161LysThr: 3.161 ± 0.0
3.793LysVal: 3.793 ± 0.0
0.632LysTrp: 0.632 ± 0.0
3.161LysTyr: 3.161 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.321LeuAla: 6.321 ± 0.0
0.948LeuCys: 0.948 ± 0.0
2.528LeuAsp: 2.528 ± 0.0
3.477LeuGlu: 3.477 ± 0.0
2.845LeuPhe: 2.845 ± 0.0
5.689LeuGly: 5.689 ± 0.0
3.161LeuHis: 3.161 ± 0.0
6.005LeuIle: 6.005 ± 0.0
3.477LeuLys: 3.477 ± 0.0
9.166LeuLeu: 9.166 ± 0.0
2.212LeuMet: 2.212 ± 0.0
7.901LeuAsn: 7.901 ± 0.0
6.637LeuPro: 6.637 ± 0.0
3.477LeuGln: 3.477 ± 0.0
7.269LeuArg: 7.269 ± 0.0
4.741LeuSer: 4.741 ± 0.0
6.005LeuThr: 6.005 ± 0.0
6.637LeuVal: 6.637 ± 0.0
1.896LeuTrp: 1.896 ± 0.0
2.212LeuTyr: 2.212 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.896MetAla: 1.896 ± 0.0
0.316MetCys: 0.316 ± 0.0
3.161MetAsp: 3.161 ± 0.0
1.58MetGlu: 1.58 ± 0.0
1.58MetPhe: 1.58 ± 0.0
2.528MetGly: 2.528 ± 0.0
0.632MetHis: 0.632 ± 0.0
2.845MetIle: 2.845 ± 0.0
1.264MetLys: 1.264 ± 0.0
1.264MetLeu: 1.264 ± 0.0
0.948MetMet: 0.948 ± 0.0
1.58MetAsn: 1.58 ± 0.0
1.58MetPro: 1.58 ± 0.0
0.0MetGln: 0.0 ± 0.0
2.212MetArg: 2.212 ± 0.0
2.528MetSer: 2.528 ± 0.0
1.58MetThr: 1.58 ± 0.0
2.212MetVal: 2.212 ± 0.0
0.316MetTrp: 0.316 ± 0.0
1.264MetTyr: 1.264 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.161AsnAla: 3.161 ± 0.0
1.58AsnCys: 1.58 ± 0.0
1.58AsnAsp: 1.58 ± 0.0
0.948AsnGlu: 0.948 ± 0.0
2.528AsnPhe: 2.528 ± 0.0
2.845AsnGly: 2.845 ± 0.0
1.58AsnHis: 1.58 ± 0.0
0.632AsnIle: 0.632 ± 0.0
2.528AsnLys: 2.528 ± 0.0
5.373AsnLeu: 5.373 ± 0.0
1.264AsnMet: 1.264 ± 0.0
2.212AsnAsn: 2.212 ± 0.0
3.161AsnPro: 3.161 ± 0.0
0.632AsnGln: 0.632 ± 0.0
2.528AsnArg: 2.528 ± 0.0
2.845AsnSer: 2.845 ± 0.0
1.896AsnThr: 1.896 ± 0.0
2.212AsnVal: 2.212 ± 0.0
0.632AsnTrp: 0.632 ± 0.0
2.528AsnTyr: 2.528 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.845ProAla: 2.845 ± 0.0
1.58ProCys: 1.58 ± 0.0
6.321ProAsp: 6.321 ± 0.0
1.58ProGlu: 1.58 ± 0.0
1.58ProPhe: 1.58 ± 0.0
3.477ProGly: 3.477 ± 0.0
0.316ProHis: 0.316 ± 0.0
4.425ProIle: 4.425 ± 0.0
2.845ProLys: 2.845 ± 0.0
5.057ProLeu: 5.057 ± 0.0
0.316ProMet: 0.316 ± 0.0
1.58ProAsn: 1.58 ± 0.0
0.632ProPro: 0.632 ± 0.0
0.316ProGln: 0.316 ± 0.0
3.477ProArg: 3.477 ± 0.0
4.109ProSer: 4.109 ± 0.0
3.161ProThr: 3.161 ± 0.0
2.845ProVal: 2.845 ± 0.0
0.0ProTrp: 0.0 ± 0.0
2.528ProTyr: 2.528 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
0.948GlnAla: 0.948 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.58GlnAsp: 1.58 ± 0.0
0.632GlnGlu: 0.632 ± 0.0
1.58GlnPhe: 1.58 ± 0.0
2.212GlnGly: 2.212 ± 0.0
0.316GlnHis: 0.316 ± 0.0
0.948GlnIle: 0.948 ± 0.0
1.58GlnLys: 1.58 ± 0.0
3.793GlnLeu: 3.793 ± 0.0
0.948GlnMet: 0.948 ± 0.0
0.316GlnAsn: 0.316 ± 0.0
1.896GlnPro: 1.896 ± 0.0
0.632GlnGln: 0.632 ± 0.0
0.948GlnArg: 0.948 ± 0.0
1.896GlnSer: 1.896 ± 0.0
2.212GlnThr: 2.212 ± 0.0
2.528GlnVal: 2.528 ± 0.0
0.316GlnTrp: 0.316 ± 0.0
0.948GlnTyr: 0.948 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.477ArgAla: 3.477 ± 0.0
1.264ArgCys: 1.264 ± 0.0
3.477ArgAsp: 3.477 ± 0.0
3.161ArgGlu: 3.161 ± 0.0
2.212ArgPhe: 2.212 ± 0.0
4.425ArgGly: 4.425 ± 0.0
2.528ArgHis: 2.528 ± 0.0
3.793ArgIle: 3.793 ± 0.0
2.845ArgLys: 2.845 ± 0.0
4.741ArgLeu: 4.741 ± 0.0
2.845ArgMet: 2.845 ± 0.0
1.896ArgAsn: 1.896 ± 0.0
3.161ArgPro: 3.161 ± 0.0
0.948ArgGln: 0.948 ± 0.0
5.373ArgArg: 5.373 ± 0.0
4.425ArgSer: 4.425 ± 0.0
2.528ArgThr: 2.528 ± 0.0
4.425ArgVal: 4.425 ± 0.0
0.632ArgTrp: 0.632 ± 0.0
2.212ArgTyr: 2.212 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.793SerAla: 3.793 ± 0.0
0.632SerCys: 0.632 ± 0.0
4.109SerAsp: 4.109 ± 0.0
1.264SerGlu: 1.264 ± 0.0
2.845SerPhe: 2.845 ± 0.0
2.845SerGly: 2.845 ± 0.0
1.58SerHis: 1.58 ± 0.0
5.689SerIle: 5.689 ± 0.0
4.425SerLys: 4.425 ± 0.0
9.482SerLeu: 9.482 ± 0.0
2.845SerMet: 2.845 ± 0.0
2.528SerAsn: 2.528 ± 0.0
3.161SerPro: 3.161 ± 0.0
1.264SerGln: 1.264 ± 0.0
2.528SerArg: 2.528 ± 0.0
4.109SerSer: 4.109 ± 0.0
5.057SerThr: 5.057 ± 0.0
3.477SerVal: 3.477 ± 0.0
0.0SerTrp: 0.0 ± 0.0
4.425SerTyr: 4.425 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.005ThrAla: 6.005 ± 0.0
0.632ThrCys: 0.632 ± 0.0
2.528ThrAsp: 2.528 ± 0.0
3.477ThrGlu: 3.477 ± 0.0
2.212ThrPhe: 2.212 ± 0.0
4.741ThrGly: 4.741 ± 0.0
0.632ThrHis: 0.632 ± 0.0
4.425ThrIle: 4.425 ± 0.0
3.793ThrLys: 3.793 ± 0.0
4.109ThrLeu: 4.109 ± 0.0
2.845ThrMet: 2.845 ± 0.0
3.477ThrAsn: 3.477 ± 0.0
3.793ThrPro: 3.793 ± 0.0
2.212ThrGln: 2.212 ± 0.0
2.845ThrArg: 2.845 ± 0.0
4.741ThrSer: 4.741 ± 0.0
4.425ThrThr: 4.425 ± 0.0
3.161ThrVal: 3.161 ± 0.0
1.896ThrTrp: 1.896 ± 0.0
2.212ThrTyr: 2.212 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.373ValAla: 5.373 ± 0.0
1.264ValCys: 1.264 ± 0.0
3.793ValAsp: 3.793 ± 0.0
2.845ValGlu: 2.845 ± 0.0
2.845ValPhe: 2.845 ± 0.0
2.845ValGly: 2.845 ± 0.0
1.896ValHis: 1.896 ± 0.0
5.689ValIle: 5.689 ± 0.0
3.793ValLys: 3.793 ± 0.0
2.528ValLeu: 2.528 ± 0.0
2.212ValMet: 2.212 ± 0.0
4.109ValAsn: 4.109 ± 0.0
3.793ValPro: 3.793 ± 0.0
2.212ValGln: 2.212 ± 0.0
3.477ValArg: 3.477 ± 0.0
3.793ValSer: 3.793 ± 0.0
5.373ValThr: 5.373 ± 0.0
4.109ValVal: 4.109 ± 0.0
0.316ValTrp: 0.316 ± 0.0
2.212ValTyr: 2.212 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.264TrpAla: 1.264 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.632TrpAsp: 0.632 ± 0.0
0.948TrpGlu: 0.948 ± 0.0
1.58TrpPhe: 1.58 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.632TrpHis: 0.632 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.632TrpLys: 0.632 ± 0.0
2.212TrpLeu: 2.212 ± 0.0
0.632TrpMet: 0.632 ± 0.0
0.316TrpAsn: 0.316 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.632TrpGln: 0.632 ± 0.0
0.632TrpArg: 0.632 ± 0.0
2.212TrpSer: 2.212 ± 0.0
0.632TrpThr: 0.632 ± 0.0
0.948TrpVal: 0.948 ± 0.0
0.632TrpTrp: 0.632 ± 0.0
1.264TrpTyr: 1.264 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.845TyrAla: 2.845 ± 0.0
0.632TyrCys: 0.632 ± 0.0
1.58TyrAsp: 1.58 ± 0.0
1.896TyrGlu: 1.896 ± 0.0
1.896TyrPhe: 1.896 ± 0.0
3.161TyrGly: 3.161 ± 0.0
0.632TyrHis: 0.632 ± 0.0
1.896TyrIle: 1.896 ± 0.0
5.057TyrLys: 5.057 ± 0.0
3.161TyrLeu: 3.161 ± 0.0
0.632TyrMet: 0.632 ± 0.0
1.264TyrAsn: 1.264 ± 0.0
1.264TyrPro: 1.264 ± 0.0
1.896TyrGln: 1.896 ± 0.0
1.58TyrArg: 1.58 ± 0.0
4.425TyrSer: 4.425 ± 0.0
1.896TyrThr: 1.896 ± 0.0
3.161TyrVal: 3.161 ± 0.0
0.316TyrTrp: 0.316 ± 0.0
0.948TyrTyr: 0.948 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3165 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski