Bruguierivorax albus

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Bruguierivoracaceae; Bruguierivorax

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4973 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4U2U9C9|A0A4U2U9C9_9GAMM 50S ribosomal protein L30 OS=Bruguierivorax albus OX=2575567 GN=rpmD PE=3 SV=1
MM1 pKa = 7.01PTISGFLAFIRR12 pKa = 11.84DD13 pKa = 3.49VMGIDD18 pKa = 3.74DD19 pKa = 5.49TILADD24 pKa = 4.3DD25 pKa = 4.72APVIAMAFRR34 pKa = 11.84LAMNTVNQNIALISCEE50 pKa = 3.99LYY52 pKa = 10.88AIAVYY57 pKa = 10.74NLAGDD62 pKa = 4.0RR63 pKa = 11.84LMNYY67 pKa = 9.99APGAFFVAYY76 pKa = 9.92RR77 pKa = 11.84QEE79 pKa = 3.81QDD81 pKa = 3.43ILDD84 pKa = 4.02FTPGVINGSSDD95 pKa = 2.97QSTSQSISVPDD106 pKa = 3.63SLSNLTLMDD115 pKa = 4.11LQNIKK120 pKa = 9.2TPWGRR125 pKa = 11.84EE126 pKa = 3.81YY127 pKa = 11.12LAIAQDD133 pKa = 4.4YY134 pKa = 7.18GTLWGLTT141 pKa = 3.68

Molecular weight: 15.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4U2UMJ7|A0A4U2UMJ7_9GAMM Propanediol dehydratase small subunit PduE OS=Bruguierivorax albus OX=2575567 GN=pduE PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.64RR12 pKa = 11.84NRR14 pKa = 11.84DD15 pKa = 3.05HH16 pKa = 7.4GFRR19 pKa = 11.84SRR21 pKa = 11.84MATKK25 pKa = 10.48NGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.22GRR39 pKa = 11.84ARR41 pKa = 11.84LTVASKK47 pKa = 11.04

Molecular weight: 5.5 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4973

0

4973

1568136

15

2835

315.3

34.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.561 ± 0.045

1.119 ± 0.014

5.366 ± 0.025

5.124 ± 0.031

3.746 ± 0.027

7.787 ± 0.036

2.324 ± 0.017

5.819 ± 0.03

3.614 ± 0.03

11.082 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.62 ± 0.018

3.43 ± 0.027

4.766 ± 0.025

4.159 ± 0.024

6.636 ± 0.034

5.673 ± 0.025

5.14 ± 0.026

6.77 ± 0.029

1.409 ± 0.016

2.856 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski