Blautia sp. CAG:37
Average proteome isoelectric point is 6.04
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2353 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|R7JTF7|R7JTF7_9FIRM UDP-glucose 4-epimerase OS=Blautia sp. CAG:37 OX=1262757 GN=BN630_02124 PE=3 SV=1
MM1 pKa = 7.3 SKK3 pKa = 10.31 VAVVYY8 pKa = 9.8 WSGTGNTEE16 pKa = 3.56 MMAQKK21 pKa = 10.15 VAEE24 pKa = 4.31 GAKK27 pKa = 9.75 EE28 pKa = 3.67 AGAEE32 pKa = 4.16 VSVLTCADD40 pKa = 4.74 FSADD44 pKa = 5.21 DD45 pKa = 3.48 VDD47 pKa = 5.35 AYY49 pKa = 11.05 DD50 pKa = 5.78 AIAFGCPAMGAEE62 pKa = 4.18 EE63 pKa = 5.23 LEE65 pKa = 4.37 DD66 pKa = 3.9 TEE68 pKa = 4.43 FEE70 pKa = 4.55 PMFSACEE77 pKa = 3.98 SKK79 pKa = 11.12 LSGKK83 pKa = 10.1 KK84 pKa = 8.94 IALFGSYY91 pKa = 8.98 GWGDD95 pKa = 4.2 GEE97 pKa = 4.96 WMRR100 pKa = 11.84 TWEE103 pKa = 4.42 EE104 pKa = 3.91 SCKK107 pKa = 10.46 NDD109 pKa = 4.16 GAEE112 pKa = 4.15 LVCDD116 pKa = 4.01 SVICADD122 pKa = 4.19 APDD125 pKa = 4.94 DD126 pKa = 3.91 EE127 pKa = 6.72 AEE129 pKa = 4.21 AACIALGKK137 pKa = 9.98 ALCC140 pKa = 4.39
Molecular weight: 14.77 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.739
IPC2_protein 3.884
IPC_protein 3.834
Toseland 3.643
ProMoST 3.973
Dawson 3.808
Bjellqvist 3.961
Wikipedia 3.706
Rodwell 3.668
Grimsley 3.554
Solomon 3.795
Lehninger 3.745
Nozaki 3.923
DTASelect 4.088
Thurlkill 3.681
EMBOSS 3.719
Sillero 3.948
Patrickios 0.985
IPC_peptide 3.795
IPC2_peptide 3.935
IPC2.peptide.svr19 3.854
Protein with the highest isoelectric point:
>tr|R7JS20|R7JS20_9FIRM Chain length determinant protein OS=Blautia sp. CAG:37 OX=1262757 GN=BN630_00008 PE=4 SV=1
MM1 pKa = 7.86 RR2 pKa = 11.84 RR3 pKa = 11.84 RR4 pKa = 11.84 SCISGMAIKK13 pKa = 10.43 RR14 pKa = 11.84 CRR16 pKa = 11.84 PVKK19 pKa = 10.82 NKK21 pKa = 8.31 ITYY24 pKa = 10.4 LITKK28 pKa = 9.19 RR29 pKa = 11.84 LRR31 pKa = 11.84 RR32 pKa = 11.84 LTEE35 pKa = 3.61 SLFFVIINAEE45 pKa = 3.71 KK46 pKa = 10.71 GIVIRR51 pKa = 11.84 CGEE54 pKa = 4.22 KK55 pKa = 9.66 GRR57 pKa = 11.84 SWGEE61 pKa = 3.36 RR62 pKa = 11.84 GVFDD66 pKa = 4.99 GKK68 pKa = 10.57 NISDD72 pKa = 3.84 RR73 pKa = 11.84 EE74 pKa = 4.04 FFLPAEE80 pKa = 4.21 VSGRR84 pKa = 11.84 AGTSGGYY91 pKa = 10.38 GKK93 pKa = 10.15 IFGGNGFCGLYY104 pKa = 9.4 IYY106 pKa = 10.4 HH107 pKa = 6.64 YY108 pKa = 9.86 GRR110 pKa = 11.84 RR111 pKa = 11.84 HH112 pKa = 4.98 IAGSGGRR119 pKa = 11.84 ADD121 pKa = 4.0 CGSGRR126 pKa = 11.84 SAGVSYY132 pKa = 10.43 KK133 pKa = 10.38 RR134 pKa = 11.84 RR135 pKa = 11.84 IGEE138 pKa = 4.0 PPDD141 pKa = 3.22 RR142 pKa = 11.84 CEE144 pKa = 3.82 RR145 pKa = 11.84 RR146 pKa = 11.84 SASLCILPP154 pKa = 4.78
Molecular weight: 17.06 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.351
IPC2_protein 9.648
IPC_protein 10.423
Toseland 10.54
ProMoST 10.248
Dawson 10.672
Bjellqvist 10.394
Wikipedia 10.877
Rodwell 10.862
Grimsley 10.73
Solomon 10.76
Lehninger 10.716
Nozaki 10.57
DTASelect 10.379
Thurlkill 10.555
EMBOSS 10.935
Sillero 10.599
Patrickios 10.57
IPC_peptide 10.76
IPC2_peptide 9.677
IPC2.peptide.svr19 8.46
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2353
0
2353
754178
32
1615
320.5
35.85
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.058 ± 0.055
1.576 ± 0.023
5.431 ± 0.045
7.836 ± 0.065
4.123 ± 0.042
7.295 ± 0.043
1.875 ± 0.023
6.636 ± 0.048
6.415 ± 0.039
9.007 ± 0.054
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.163 ± 0.024
3.938 ± 0.032
3.557 ± 0.029
3.381 ± 0.03
4.565 ± 0.041
5.599 ± 0.04
5.559 ± 0.043
7.032 ± 0.046
1.006 ± 0.019
3.944 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here