Beluga whale alphaherpesvirus 1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Monodontid alphaherpesvirus 1

Average proteome isoelectric point is 6.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 80 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A286MM97|A0A286MM97_9ALPH Protein Mo1 OS=Beluga whale alphaherpesvirus 1 OX=1434720 GN=Mo1 PE=4 SV=1
MM1 pKa = 7.49AAFVSDD7 pKa = 3.41RR8 pKa = 11.84WFDD11 pKa = 3.64AYY13 pKa = 10.59MGDD16 pKa = 3.69PWSEE20 pKa = 3.71PVYY23 pKa = 11.09VSLTTPLSEE32 pKa = 4.18SAPRR36 pKa = 11.84GTPRR40 pKa = 11.84RR41 pKa = 11.84APSTGSPPPSPDD53 pKa = 3.35PEE55 pKa = 4.19RR56 pKa = 11.84APPLPPDD63 pKa = 4.48PLPPVPDD70 pKa = 4.3SPPPPYY76 pKa = 9.65PAAEE80 pKa = 4.25TPPSFPLADD89 pKa = 3.69PARR92 pKa = 11.84GDD94 pKa = 3.77EE95 pKa = 4.47APGAPEE101 pKa = 4.29DD102 pKa = 3.92ARR104 pKa = 11.84ITATSVEE111 pKa = 4.25NPSYY115 pKa = 10.67LGPLLLPAGLPDD127 pKa = 4.68RR128 pKa = 11.84PPAYY132 pKa = 8.12DD133 pKa = 3.64TLSVALPPPSYY144 pKa = 10.2EE145 pKa = 3.68WAIMDD150 pKa = 5.33DD151 pKa = 4.1LLASIAYY158 pKa = 7.5PRR160 pKa = 11.84LGEE163 pKa = 4.19KK164 pKa = 9.69EE165 pKa = 4.16CCNVVGLAALLILIIILFGVFAYY188 pKa = 9.71ILAGSGGGMSKK199 pKa = 10.77

Molecular weight: 20.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A286MM96|A0A286MM96_9ALPH Protein Mo7 OS=Beluga whale alphaherpesvirus 1 OX=1434720 GN=Mo7 PE=4 SV=1
MM1 pKa = 7.79DD2 pKa = 5.43RR3 pKa = 11.84GAAGLGRR10 pKa = 11.84AACALQVWLALGLARR25 pKa = 11.84GVGAHH30 pKa = 6.48TDD32 pKa = 3.57DD33 pKa = 5.2EE34 pKa = 5.64IDD36 pKa = 3.45VSEE39 pKa = 4.57YY40 pKa = 10.33PVYY43 pKa = 10.65NCSLVAVRR51 pKa = 11.84NFAGWFVPPAYY62 pKa = 10.06AVICLVGVFGNLLVLAMFVTYY83 pKa = 10.53AKK85 pKa = 10.11SRR87 pKa = 11.84CLTDD91 pKa = 3.65VFIANMALADD101 pKa = 4.29LLLVLTLPFWAVQHH115 pKa = 6.91ALDD118 pKa = 4.71DD119 pKa = 4.66WIFSNIACKK128 pKa = 7.95VTRR131 pKa = 11.84GIYY134 pKa = 10.19AINFNCGMLLLTCIGVDD151 pKa = 3.31RR152 pKa = 11.84YY153 pKa = 10.33IAIVRR158 pKa = 11.84ASTAARR164 pKa = 11.84LRR166 pKa = 11.84DD167 pKa = 3.64RR168 pKa = 11.84LRR170 pKa = 11.84ARR172 pKa = 11.84SGLICVGVWAVALATASGTFVFTQKK197 pKa = 10.63YY198 pKa = 8.63HH199 pKa = 4.82VTNSTHH205 pKa = 5.47VCDD208 pKa = 4.86ARR210 pKa = 11.84FDD212 pKa = 4.14TTSSAPLVWRR222 pKa = 11.84RR223 pKa = 11.84LMLSVQLASGFFFPVVCMGVFYY245 pKa = 9.88FLIIRR250 pKa = 11.84RR251 pKa = 11.84LLRR254 pKa = 11.84SINARR259 pKa = 11.84KK260 pKa = 8.06HH261 pKa = 3.61TAIRR265 pKa = 11.84VSLAMVLVFFVCQLPHH281 pKa = 6.68NSVLLMTAVNSHH293 pKa = 5.18GMVVHH298 pKa = 6.35NRR300 pKa = 11.84TDD302 pKa = 3.09NVTEE306 pKa = 3.99IWCPIMRR313 pKa = 11.84NLRR316 pKa = 11.84YY317 pKa = 9.28AQRR320 pKa = 11.84ATEE323 pKa = 4.14VLAFLHH329 pKa = 6.55GSVNPVLYY337 pKa = 10.77AFLGKK342 pKa = 10.21KK343 pKa = 9.65FRR345 pKa = 11.84EE346 pKa = 3.88QFLRR350 pKa = 11.84MVRR353 pKa = 11.84RR354 pKa = 11.84RR355 pKa = 11.84GAAPAMRR362 pKa = 11.84ISSPVKK368 pKa = 9.67RR369 pKa = 11.84PSISPPPARR378 pKa = 11.84PLLGAVCGPPRR389 pKa = 11.84SPPPKK394 pKa = 9.39TVFTFPSDD402 pKa = 3.55GFSGPVFPLVVAFPAALPAPPHH424 pKa = 5.38SLGWVSSPEE433 pKa = 3.83RR434 pKa = 11.84PGRR437 pKa = 11.84VARR440 pKa = 11.84PLDD443 pKa = 3.66SAPRR447 pKa = 11.84RR448 pKa = 11.84ARR450 pKa = 11.84TRR452 pKa = 11.84GTPAAHH458 pKa = 5.8VEE460 pKa = 4.38KK461 pKa = 11.09VV462 pKa = 2.98

Molecular weight: 50.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

80

0

80

39899

79

2627

498.7

53.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

15.316 ± 0.466

1.857 ± 0.101

5.699 ± 0.148

5.379 ± 0.191

3.406 ± 0.184

8.025 ± 0.205

2.095 ± 0.099

2.436 ± 0.133

1.556 ± 0.138

9.592 ± 0.28

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.511 ± 0.098

1.957 ± 0.158

8.346 ± 0.377

2.045 ± 0.122

9.105 ± 0.242

5.755 ± 0.192

4.827 ± 0.159

7.308 ± 0.199

1.14 ± 0.066

2.642 ± 0.132
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski