Avian metaavulavirus 6

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G5D6G3|G5D6G3_9MONO Phosphoprotein OS=Avian metaavulavirus 6 OX=2560316 GN=P PE=4 SV=1
MM1 pKa = 7.42SSVFTDD7 pKa = 3.69YY8 pKa = 11.8AKK10 pKa = 11.09LQDD13 pKa = 4.02ALVAPSKK20 pKa = 10.52RR21 pKa = 11.84KK22 pKa = 9.69VDD24 pKa = 3.77SAPSGLLRR32 pKa = 11.84VGIPVCVLLSEE43 pKa = 4.89DD44 pKa = 3.83PEE46 pKa = 4.29EE47 pKa = 4.06RR48 pKa = 11.84WGFVCFCMRR57 pKa = 11.84WVVSDD62 pKa = 3.69SATEE66 pKa = 3.88AMRR69 pKa = 11.84VGAMLSILSAHH80 pKa = 6.81ASNMRR85 pKa = 11.84SHH87 pKa = 6.44VALAARR93 pKa = 11.84CGDD96 pKa = 3.3ADD98 pKa = 3.76INILEE103 pKa = 4.38VEE105 pKa = 5.02AIDD108 pKa = 5.02HH109 pKa = 5.5QNQTIRR115 pKa = 11.84FTGRR119 pKa = 11.84SNVTDD124 pKa = 3.37GRR126 pKa = 11.84ARR128 pKa = 11.84QMYY131 pKa = 10.38AIAQDD136 pKa = 4.5LPPSYY141 pKa = 11.42NNGSPFVNRR150 pKa = 11.84DD151 pKa = 2.78IEE153 pKa = 4.84DD154 pKa = 3.77NYY156 pKa = 8.75PTDD159 pKa = 3.45MSEE162 pKa = 4.5LLNMVYY168 pKa = 10.38SVATQIWVAAMKK180 pKa = 10.93SMTAPDD186 pKa = 3.71TSSEE190 pKa = 4.37SEE192 pKa = 3.84GRR194 pKa = 11.84RR195 pKa = 11.84LAKK198 pKa = 10.21YY199 pKa = 8.56IQQNRR204 pKa = 11.84VIRR207 pKa = 11.84STILAPATRR216 pKa = 11.84GEE218 pKa = 4.26CTRR221 pKa = 11.84IIRR224 pKa = 11.84SSLVIRR230 pKa = 11.84HH231 pKa = 5.71FLITEE236 pKa = 4.4IKK238 pKa = 9.89RR239 pKa = 11.84ATSMGSNTTRR249 pKa = 11.84YY250 pKa = 8.83YY251 pKa = 10.73ATVGDD256 pKa = 3.58AAAYY260 pKa = 7.74FKK262 pKa = 10.82NAGMAAFFLTLRR274 pKa = 11.84FGIGTKK280 pKa = 10.51YY281 pKa = 9.43STLAVSALSADD292 pKa = 3.73MKK294 pKa = 10.77KK295 pKa = 9.96LQSLIRR301 pKa = 11.84VYY303 pKa = 10.2QSKK306 pKa = 11.07GEE308 pKa = 4.34DD309 pKa = 3.65GPYY312 pKa = 9.38MAFLEE317 pKa = 5.16DD318 pKa = 3.68SDD320 pKa = 4.92LMSFAPGNYY329 pKa = 8.64PLMYY333 pKa = 9.44SYY335 pKa = 11.87AMGVGSILEE344 pKa = 3.99ASIARR349 pKa = 11.84YY350 pKa = 9.26QFARR354 pKa = 11.84SFMNDD359 pKa = 2.11TFYY362 pKa = 11.54RR363 pKa = 11.84LGVEE367 pKa = 4.17TAQRR371 pKa = 11.84NQGSLDD377 pKa = 3.5EE378 pKa = 4.61NLAKK382 pKa = 10.28EE383 pKa = 4.22LQLSGAEE390 pKa = 3.53RR391 pKa = 11.84RR392 pKa = 11.84AVQEE396 pKa = 4.23LVTSLDD402 pKa = 3.73LAGEE406 pKa = 4.17APVPQRR412 pKa = 11.84QPTFLNDD419 pKa = 3.12QEE421 pKa = 5.41YY422 pKa = 10.85EE423 pKa = 4.05DD424 pKa = 5.44DD425 pKa = 4.08PPARR429 pKa = 11.84RR430 pKa = 11.84QRR432 pKa = 11.84IEE434 pKa = 4.36DD435 pKa = 3.89TPDD438 pKa = 3.91DD439 pKa = 4.98DD440 pKa = 5.52GASQAPPTPGAGLTPYY456 pKa = 10.59SDD458 pKa = 3.45NASGLDD464 pKa = 3.3II465 pKa = 5.27

Molecular weight: 51.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G5D6G5|G5D6G5_9MONO Fusion glycoprotein F0 OS=Avian metaavulavirus 6 OX=2560316 GN=F PE=3 SV=1
MM1 pKa = 7.19ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPQLRR41 pKa = 11.84TQYY44 pKa = 11.0LGDD47 pKa = 3.37VTGGKK52 pKa = 9.84KK53 pKa = 9.8SAIFVNCYY61 pKa = 10.56GFVEE65 pKa = 4.29DD66 pKa = 4.99HH67 pKa = 6.8GGRR70 pKa = 11.84DD71 pKa = 3.4SGFSPISEE79 pKa = 4.15EE80 pKa = 4.5SKK82 pKa = 10.92GSTVTAACITLGSIEE97 pKa = 4.36YY98 pKa = 10.47DD99 pKa = 3.18SDD101 pKa = 3.18IKK103 pKa = 10.93EE104 pKa = 4.22VAKK107 pKa = 10.58ACYY110 pKa = 9.07NLQVSVRR117 pKa = 11.84MSADD121 pKa = 2.95STQKK125 pKa = 10.21VVYY128 pKa = 8.98TINAKK133 pKa = 9.6PALLFSSRR141 pKa = 11.84VVRR144 pKa = 11.84AGGCVVAAEE153 pKa = 4.45GAIKK157 pKa = 10.41CPEE160 pKa = 3.99KK161 pKa = 9.16MTSDD165 pKa = 3.15RR166 pKa = 11.84LYY168 pKa = 9.74KK169 pKa = 10.02FRR171 pKa = 11.84VMFVSLTFLHH181 pKa = 6.75RR182 pKa = 11.84SSLFKK187 pKa = 10.81VSRR190 pKa = 11.84TVLSMRR196 pKa = 11.84NSALIAVQAEE206 pKa = 4.41VKK208 pKa = 10.66LGFDD212 pKa = 4.54LPLDD216 pKa = 3.87HH217 pKa = 7.56PMAKK221 pKa = 10.07YY222 pKa = 10.32LSKK225 pKa = 11.13EE226 pKa = 4.03DD227 pKa = 3.58GQLFATVWVHH237 pKa = 5.99LCNFKK242 pKa = 9.97RR243 pKa = 11.84TDD245 pKa = 3.0RR246 pKa = 11.84RR247 pKa = 11.84GVDD250 pKa = 2.93RR251 pKa = 11.84SVEE254 pKa = 4.03NIRR257 pKa = 11.84NKK259 pKa = 9.07VRR261 pKa = 11.84AMGLKK266 pKa = 8.96LTLCDD271 pKa = 3.23LWGPTLVCEE280 pKa = 4.65ATGKK284 pKa = 8.15MSKK287 pKa = 10.14YY288 pKa = 10.12ALGFFSEE295 pKa = 4.78TKK297 pKa = 10.42VGCHH301 pKa = 6.72PIWKK305 pKa = 9.49CNSTVAKK312 pKa = 10.45IMWSCTTWIASAKK325 pKa = 10.37AIIQASSARR334 pKa = 11.84ALLTSEE340 pKa = 5.43DD341 pKa = 3.89IEE343 pKa = 4.49AKK345 pKa = 10.52GAISTDD351 pKa = 3.02KK352 pKa = 11.09KK353 pKa = 10.19KK354 pKa = 9.38TDD356 pKa = 3.42GFNPFIKK363 pKa = 9.44TAKK366 pKa = 9.97

Molecular weight: 36.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

4812

142

2241

687.4

75.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.502 ± 0.869

2.057 ± 0.277

4.738 ± 0.348

5.403 ± 0.464

3.159 ± 0.373

6.068 ± 0.222

2.244 ± 0.459

6.796 ± 0.52

4.468 ± 0.502

10.287 ± 1.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.431 ± 0.242

4.426 ± 0.374

4.468 ± 0.338

4.281 ± 0.455

5.32 ± 0.455

8.084 ± 0.23

6.816 ± 0.494

6.671 ± 0.272

1.164 ± 0.238

2.951 ± 0.382
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski