Kamese virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Hapavirus; Kamese hapavirus

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D3R1J2|A0A0D3R1J2_9RHAB Matrix OS=Kamese virus OX=200402 PE=4 SV=1
MM1 pKa = 7.61KK2 pKa = 10.63LFINAGLTFNYY13 pKa = 9.75YY14 pKa = 10.5LPEE17 pKa = 4.29LPKK20 pKa = 10.84DD21 pKa = 3.64VLHH24 pKa = 6.68EE25 pKa = 4.93IISIMITRR33 pKa = 11.84CVTMSGFPEE42 pKa = 4.39DD43 pKa = 3.4LAAFAVNWTWEE54 pKa = 4.11QTQLCYY60 pKa = 10.84YY61 pKa = 10.53DD62 pKa = 4.86FDD64 pKa = 4.31VSHH67 pKa = 7.09GYY69 pKa = 9.62SWIQDD74 pKa = 4.04DD75 pKa = 4.51IEE77 pKa = 4.83LPGDD81 pKa = 3.52IKK83 pKa = 11.05SDD85 pKa = 3.51QPVLKK90 pKa = 9.49EE91 pKa = 3.59YY92 pKa = 10.57RR93 pKa = 11.84IRR95 pKa = 11.84TEE97 pKa = 3.77FPIGIDD103 pKa = 3.16RR104 pKa = 11.84NTGEE108 pKa = 4.34VEE110 pKa = 3.46FFIYY114 pKa = 10.33INTQINRR121 pKa = 11.84DD122 pKa = 3.55APHH125 pKa = 7.12WSSVWWPKK133 pKa = 11.12LMDD136 pKa = 4.61PLANYY141 pKa = 9.42LFRR144 pKa = 11.84NPDD147 pKa = 3.26QVASKK152 pKa = 11.1YY153 pKa = 10.87GFLHH157 pKa = 5.82MLYY160 pKa = 9.32TT161 pKa = 4.07

Molecular weight: 19.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D3R117|A0A0D3R117_9RHAB Nucleocapsid protein OS=Kamese virus OX=200402 PE=4 SV=1
MM1 pKa = 7.61GFNFDD6 pKa = 3.38VDD8 pKa = 3.8VAKK11 pKa = 10.42PIQGAFKK18 pKa = 10.71NLWNDD23 pKa = 2.65ITRR26 pKa = 11.84FFEE29 pKa = 5.43PFLTWISDD37 pKa = 3.07IGKK40 pKa = 7.92WALIILLVIVSIKK53 pKa = 10.14ILIVIYY59 pKa = 10.5KK60 pKa = 9.9IGKK63 pKa = 8.32CLWKK67 pKa = 10.68SGLCLKK73 pKa = 10.54RR74 pKa = 11.84CFRR77 pKa = 11.84RR78 pKa = 11.84IKK80 pKa = 8.76KK81 pKa = 8.08TKK83 pKa = 8.85IRR85 pKa = 11.84KK86 pKa = 8.96KK87 pKa = 10.27VSLKK91 pKa = 10.49LRR93 pKa = 11.84SKK95 pKa = 10.45RR96 pKa = 11.84IKK98 pKa = 10.11KK99 pKa = 10.03KK100 pKa = 10.69RR101 pKa = 11.84ILL103 pKa = 3.67

Molecular weight: 12.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10

0

10

4319

100

2104

431.9

49.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.584 ± 0.677

1.806 ± 0.282

5.302 ± 0.516

5.858 ± 0.337

4.237 ± 0.327

5.302 ± 0.21

2.524 ± 0.291

7.293 ± 0.513

5.696 ± 0.747

10.28 ± 0.976

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.639 ± 0.207

5.858 ± 0.538

4.538 ± 0.439

3.473 ± 0.294

5.487 ± 0.345

7.78 ± 0.476

5.464 ± 0.498

5.534 ± 0.251

2.269 ± 0.25

4.075 ± 0.387
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski