Chimpanzee faeces associated circular DNA molecule 1

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A186YBL4|A0A186YBL4_9VIRU Replication associated protein OS=Chimpanzee faeces associated circular DNA molecule 1 OX=1676185 PE=3 SV=1
MM1 pKa = 6.74ATSRR5 pKa = 11.84ICYY8 pKa = 9.57SQVLLTYY15 pKa = 7.07PQCSKK20 pKa = 11.1SKK22 pKa = 10.96EE23 pKa = 3.94EE24 pKa = 3.84LLEE27 pKa = 4.19YY28 pKa = 9.93IQSIEE33 pKa = 4.28NIQCAIVAKK42 pKa = 9.62EE43 pKa = 3.89NHH45 pKa = 6.1NEE47 pKa = 3.99TEE49 pKa = 4.22GEE51 pKa = 4.25HH52 pKa = 4.65LHH54 pKa = 6.22AWIKK58 pKa = 10.15FRR60 pKa = 11.84HH61 pKa = 4.65QMKK64 pKa = 10.09IAGSKK69 pKa = 8.74WGHH72 pKa = 5.67LFDD75 pKa = 4.49WEE77 pKa = 5.05GIHH80 pKa = 7.3GNYY83 pKa = 8.25QRR85 pKa = 11.84VMVTQRR91 pKa = 11.84SVADD95 pKa = 3.49TVKK98 pKa = 10.73YY99 pKa = 10.61VMKK102 pKa = 10.94DD103 pKa = 2.6GDD105 pKa = 4.12TLVWNCDD112 pKa = 3.11PEE114 pKa = 5.36EE115 pKa = 3.91IMKK118 pKa = 10.52ASKK121 pKa = 10.74SKK123 pKa = 9.99GRR125 pKa = 11.84KK126 pKa = 8.45YY127 pKa = 10.74DD128 pKa = 3.54NKK130 pKa = 10.44VLLEE134 pKa = 4.24TPNEE138 pKa = 3.98VLVEE142 pKa = 4.01KK143 pKa = 10.82GIIPLSQLMTIKK155 pKa = 10.29KK156 pKa = 10.06AKK158 pKa = 9.8EE159 pKa = 3.35IYY161 pKa = 10.59ALLKK165 pKa = 9.99QPKK168 pKa = 9.57DD169 pKa = 3.38KK170 pKa = 11.48LNVRR174 pKa = 11.84GIWLHH179 pKa = 6.23GKK181 pKa = 9.48AGCGKK186 pKa = 8.63STLARR191 pKa = 11.84KK192 pKa = 7.4MAKK195 pKa = 9.61EE196 pKa = 3.83LFEE199 pKa = 4.77GYY201 pKa = 9.07YY202 pKa = 10.21EE203 pKa = 4.28KK204 pKa = 10.7PQNKK208 pKa = 8.09WFDD211 pKa = 3.37GYY213 pKa = 11.34AGEE216 pKa = 4.58KK217 pKa = 10.49CIILDD222 pKa = 5.29DD223 pKa = 5.15LDD225 pKa = 3.92TTQLFHH231 pKa = 7.47HH232 pKa = 6.56IKK234 pKa = 9.79IWADD238 pKa = 3.73RR239 pKa = 11.84YY240 pKa = 9.39ACKK243 pKa = 10.82GEE245 pKa = 4.26IKK247 pKa = 10.72GSTVWLKK254 pKa = 11.01HH255 pKa = 6.26DD256 pKa = 3.68MLIITSNWSIDD267 pKa = 4.19EE268 pKa = 4.43ICDD271 pKa = 3.54QAVDD275 pKa = 3.36GHH277 pKa = 6.58KK278 pKa = 10.9YY279 pKa = 10.0RR280 pKa = 11.84DD281 pKa = 3.3ALKK284 pKa = 10.63RR285 pKa = 11.84RR286 pKa = 11.84FTEE289 pKa = 3.68ITVQPGEE296 pKa = 4.58KK297 pKa = 10.14YY298 pKa = 10.19ISLPDD303 pKa = 3.42GFTYY307 pKa = 10.71DD308 pKa = 4.4NPDD311 pKa = 3.05VDD313 pKa = 4.38DD314 pKa = 5.74DD315 pKa = 5.13YY316 pKa = 11.83YY317 pKa = 11.74LKK319 pKa = 10.89LATEE323 pKa = 4.91PPTKK327 pKa = 9.92KK328 pKa = 10.52DD329 pKa = 3.35PSQDD333 pKa = 3.3LSNTLLGSGYY343 pKa = 11.22

Molecular weight: 39.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A186YBL4|A0A186YBL4_9VIRU Replication associated protein OS=Chimpanzee faeces associated circular DNA molecule 1 OX=1676185 PE=3 SV=1
MM1 pKa = 6.74ATSRR5 pKa = 11.84ICYY8 pKa = 9.57SQVLLTYY15 pKa = 7.07PQCSKK20 pKa = 11.1SKK22 pKa = 10.96EE23 pKa = 3.94EE24 pKa = 3.84LLEE27 pKa = 4.19YY28 pKa = 9.93IQSIEE33 pKa = 4.28NIQCAIVAKK42 pKa = 9.62EE43 pKa = 3.89NHH45 pKa = 6.1NEE47 pKa = 3.99TEE49 pKa = 4.22GEE51 pKa = 4.25HH52 pKa = 4.65LHH54 pKa = 6.22AWIKK58 pKa = 10.15FRR60 pKa = 11.84HH61 pKa = 4.65QMKK64 pKa = 10.09IAGSKK69 pKa = 8.74WGHH72 pKa = 5.67LFDD75 pKa = 4.49WEE77 pKa = 5.05GIHH80 pKa = 7.3GNYY83 pKa = 8.25QRR85 pKa = 11.84VMVTQRR91 pKa = 11.84SVADD95 pKa = 3.49TVKK98 pKa = 10.73YY99 pKa = 10.61VMKK102 pKa = 10.94DD103 pKa = 2.6GDD105 pKa = 4.12TLVWNCDD112 pKa = 3.11PEE114 pKa = 5.36EE115 pKa = 3.91IMKK118 pKa = 10.52ASKK121 pKa = 10.74SKK123 pKa = 9.99GRR125 pKa = 11.84KK126 pKa = 8.45YY127 pKa = 10.74DD128 pKa = 3.54NKK130 pKa = 10.44VLLEE134 pKa = 4.24TPNEE138 pKa = 3.98VLVEE142 pKa = 4.01KK143 pKa = 10.82GIIPLSQLMTIKK155 pKa = 10.29KK156 pKa = 10.06AKK158 pKa = 9.8EE159 pKa = 3.35IYY161 pKa = 10.59ALLKK165 pKa = 9.99QPKK168 pKa = 9.57DD169 pKa = 3.38KK170 pKa = 11.48LNVRR174 pKa = 11.84GIWLHH179 pKa = 6.23GKK181 pKa = 9.48AGCGKK186 pKa = 8.63STLARR191 pKa = 11.84KK192 pKa = 7.4MAKK195 pKa = 9.61EE196 pKa = 3.83LFEE199 pKa = 4.77GYY201 pKa = 9.07YY202 pKa = 10.21EE203 pKa = 4.28KK204 pKa = 10.7PQNKK208 pKa = 8.09WFDD211 pKa = 3.37GYY213 pKa = 11.34AGEE216 pKa = 4.58KK217 pKa = 10.49CIILDD222 pKa = 5.29DD223 pKa = 5.15LDD225 pKa = 3.92TTQLFHH231 pKa = 7.47HH232 pKa = 6.56IKK234 pKa = 9.79IWADD238 pKa = 3.73RR239 pKa = 11.84YY240 pKa = 9.39ACKK243 pKa = 10.82GEE245 pKa = 4.26IKK247 pKa = 10.72GSTVWLKK254 pKa = 11.01HH255 pKa = 6.26DD256 pKa = 3.68MLIITSNWSIDD267 pKa = 4.19EE268 pKa = 4.43ICDD271 pKa = 3.54QAVDD275 pKa = 3.36GHH277 pKa = 6.58KK278 pKa = 10.9YY279 pKa = 10.0RR280 pKa = 11.84DD281 pKa = 3.3ALKK284 pKa = 10.63RR285 pKa = 11.84RR286 pKa = 11.84FTEE289 pKa = 3.68ITVQPGEE296 pKa = 4.58KK297 pKa = 10.14YY298 pKa = 10.19ISLPDD303 pKa = 3.42GFTYY307 pKa = 10.71DD308 pKa = 4.4NPDD311 pKa = 3.05VDD313 pKa = 4.38DD314 pKa = 5.74DD315 pKa = 5.13YY316 pKa = 11.83YY317 pKa = 11.74LKK319 pKa = 10.89LATEE323 pKa = 4.91PPTKK327 pKa = 9.92KK328 pKa = 10.52DD329 pKa = 3.35PSQDD333 pKa = 3.3LSNTLLGSGYY343 pKa = 11.22

Molecular weight: 39.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

343

343

343

343.0

39.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.248 ± 0.0

2.332 ± 0.0

7.289 ± 0.0

6.997 ± 0.0

2.041 ± 0.0

6.414 ± 0.0

3.207 ± 0.0

7.289 ± 0.0

10.787 ± 0.0

8.746 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.332 ± 0.0

3.499 ± 0.0

3.499 ± 0.0

4.082 ± 0.0

3.207 ± 0.0

5.248 ± 0.0

5.539 ± 0.0

4.665 ± 0.0

2.624 ± 0.0

4.956 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski