Camponotus yamaokai virus
Average proteome isoelectric point is 6.91
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0F7R4X8|A0A0F7R4X8_9VIRU Capsid protein OS=Camponotus yamaokai virus OX=1608533 PE=4 SV=1
MM1 pKa = 7.62 MDD3 pKa = 4.52 FLTSQATVKK12 pKa = 10.82 NCIGWIFSPLMTVGSPTGSLEE33 pKa = 4.23 TTFCGQDD40 pKa = 2.92 TASRR44 pKa = 11.84 NGSKK48 pKa = 9.69 HH49 pKa = 5.07 QSYY52 pKa = 7.47 TTWDD56 pKa = 3.76 CLSRR60 pKa = 11.84 QYY62 pKa = 11.44 LCGSVVVDD70 pKa = 3.31 KK71 pKa = 11.38 LEE73 pKa = 3.99 RR74 pKa = 11.84 AKK76 pKa = 11.01 RR77 pKa = 11.84 EE78 pKa = 3.68 VTPRR82 pKa = 11.84 MTEE85 pKa = 3.96 RR86 pKa = 11.84 FQDD89 pKa = 3.45 VPTQEE94 pKa = 4.53 EE95 pKa = 4.52 LDD97 pKa = 4.15 ALTEE101 pKa = 4.06 MQRR104 pKa = 11.84 DD105 pKa = 4.21 LYY107 pKa = 11.09 HH108 pKa = 7.08 DD109 pKa = 3.94 GLRR112 pKa = 11.84 VFVRR116 pKa = 11.84 GKK118 pKa = 11.25 GLMTSQQHH126 pKa = 4.6 QKK128 pKa = 10.08 YY129 pKa = 9.8 LSSRR133 pKa = 11.84 LEE135 pKa = 3.7 RR136 pKa = 11.84 STRR139 pKa = 11.84 SPRR142 pKa = 11.84 KK143 pKa = 9.74 KK144 pKa = 9.11 RR145 pKa = 11.84 TQDD148 pKa = 3.0 QEE150 pKa = 4.14 LASGSKK156 pKa = 9.28 TDD158 pKa = 3.93 EE159 pKa = 3.56 EE160 pKa = 4.45 HH161 pKa = 6.77 AAEE164 pKa = 5.6 DD165 pKa = 3.8 EE166 pKa = 4.4 TPDD169 pKa = 3.67 RR170 pKa = 11.84 VKK172 pKa = 10.7 RR173 pKa = 11.84 DD174 pKa = 3.28 EE175 pKa = 4.25 NEE177 pKa = 3.82 NKK179 pKa = 9.58 FFYY182 pKa = 10.72 SDD184 pKa = 4.36 TIPVKK189 pKa = 10.78 CMGVSTMQCARR200 pKa = 11.84 EE201 pKa = 4.05 TDD203 pKa = 3.62 PMPWSPTFQLMASRR217 pKa = 11.84 LNDD220 pKa = 3.57 PAATGVLAAVVKK232 pKa = 10.44 GPNVRR237 pKa = 11.84 DD238 pKa = 3.56 ATAWTSLVKK247 pKa = 10.49 SIMLRR252 pKa = 11.84 QSTRR256 pKa = 11.84 YY257 pKa = 9.01 EE258 pKa = 3.78 LAAMIRR264 pKa = 11.84 VLCMALSLADD274 pKa = 3.82 EE275 pKa = 4.69 SYY277 pKa = 11.53 KK278 pKa = 10.64 LDD280 pKa = 3.57 PTPIRR285 pKa = 11.84 FIRR288 pKa = 11.84 NEE290 pKa = 3.88 HH291 pKa = 6.05 KK292 pKa = 9.87 VTYY295 pKa = 9.12 DD296 pKa = 3.23 GQVIRR301 pKa = 11.84 EE302 pKa = 4.16 KK303 pKa = 10.79 PGFDD307 pKa = 2.84 AGEE310 pKa = 4.18 YY311 pKa = 9.54 QVIAMPIDD319 pKa = 3.78 VFIALANNSCFEE331 pKa = 4.14 NAPHH335 pKa = 6.17 GFEE338 pKa = 5.19 YY339 pKa = 10.79 KK340 pKa = 10.6 DD341 pKa = 4.78 LDD343 pKa = 3.94 IGWTAVPVSSDD354 pKa = 2.46 IANFDD359 pKa = 3.55 TLIPYY364 pKa = 9.56 LAAFLTSDD372 pKa = 3.67 LWSGTVNQHH381 pKa = 5.71 YY382 pKa = 10.38 SIEE385 pKa = 4.15 YY386 pKa = 8.89 QSDD389 pKa = 3.56 NIRR392 pKa = 11.84 RR393 pKa = 11.84 RR394 pKa = 11.84 FDD396 pKa = 3.75 EE397 pKa = 3.8 TWMPCVNSVNIPGQKK412 pKa = 9.29 RR413 pKa = 11.84 AALILIDD420 pKa = 4.22 EE421 pKa = 4.73 TSMTTQNFVKK431 pKa = 9.56 LTTGQQFINVPIWKK445 pKa = 9.65 GNNNVVPVNWGNLWRR460 pKa = 11.84 AYY462 pKa = 9.58 WNTNNISKK470 pKa = 9.87 IRR472 pKa = 11.84 HH473 pKa = 4.72 TALLAHH479 pKa = 6.7 EE480 pKa = 5.11 KK481 pKa = 9.63 ICTRR485 pKa = 11.84 MGVGDD490 pKa = 3.84 ACGTAVSLVAEE501 pKa = 5.28 LYY503 pKa = 8.55 GHH505 pKa = 7.61 WYY507 pKa = 9.8 HH508 pKa = 7.52 GIAPRR513 pKa = 11.84 YY514 pKa = 7.94 KK515 pKa = 9.55 AKK517 pKa = 10.12 TMAFDD522 pKa = 3.9 YY523 pKa = 11.33 DD524 pKa = 3.85 KK525 pKa = 11.28 VPYY528 pKa = 9.6 GAWTIDD534 pKa = 2.92 GDD536 pKa = 4.18 YY537 pKa = 10.93 LDD539 pKa = 3.8 KK540 pKa = 11.21 RR541 pKa = 11.84 KK542 pKa = 8.95 MFRR545 pKa = 11.84 SHH547 pKa = 7.15 KK548 pKa = 9.55 FTLDD552 pKa = 3.33 DD553 pKa = 4.48 PKK555 pKa = 11.27 CMEE558 pKa = 3.54 ARR560 pKa = 11.84 RR561 pKa = 11.84 RR562 pKa = 11.84 CVAYY566 pKa = 10.12 NFSGVSPMHH575 pKa = 6.73 LSPTGLVKK583 pKa = 10.16 IAYY586 pKa = 9.59 VNDD589 pKa = 3.55 SEE591 pKa = 4.55 RR592 pKa = 11.84 LRR594 pKa = 11.84 VTWAEE599 pKa = 3.79 QHH601 pKa = 6.67 PEE603 pKa = 3.93 FAATTYY609 pKa = 10.67 NIQTMSSIYY618 pKa = 9.91 RR619 pKa = 11.84 VAAACGLILTHH630 pKa = 6.5 TDD632 pKa = 2.67 SYY634 pKa = 11.96 AFGEE638 pKa = 4.67 VQGATHH644 pKa = 7.98 WIHH647 pKa = 6.21 MLSCAISFTTSSFLSINDD665 pKa = 3.84 LAPRR669 pKa = 11.84 DD670 pKa = 3.76 WIGIDD675 pKa = 3.6 NRR677 pKa = 11.84 DD678 pKa = 3.67 DD679 pKa = 3.65 TQHH682 pKa = 6.82 RR683 pKa = 11.84 EE684 pKa = 3.98 SVMGGLKK691 pKa = 8.78 TALYY695 pKa = 10.14 GGLINHH701 pKa = 5.79 VNIEE705 pKa = 4.2 QYY707 pKa = 10.29 FGHH710 pKa = 6.77 IPEE713 pKa = 4.37 WDD715 pKa = 3.68 LDD717 pKa = 3.85 IMSEE721 pKa = 4.61 YY722 pKa = 10.87 YY723 pKa = 10.61 GVSAYY728 pKa = 11.33 NNINWMTFSPVPFHH742 pKa = 6.99 ATWQWVCKK750 pKa = 10.08 LQLEE754 pKa = 4.84 TGAPMPKK761 pKa = 10.28 GITTFKK767 pKa = 10.71 YY768 pKa = 9.57 NSKK771 pKa = 10.84 NYY773 pKa = 10.58 DD774 pKa = 3.7 CIKK777 pKa = 9.74 LTKK780 pKa = 9.7 EE781 pKa = 4.1 CNEE784 pKa = 3.88 HH785 pKa = 6.76 KK786 pKa = 10.15 MNSVCAIDD794 pKa = 3.72 VYY796 pKa = 10.67 RR797 pKa = 11.84 RR798 pKa = 11.84 CPTVVARR805 pKa = 11.84 EE806 pKa = 3.75 PDD808 pKa = 3.52 ANYY811 pKa = 10.34 VPILQWIDD819 pKa = 3.16 NVSRR823 pKa = 11.84 YY824 pKa = 10.42 SSVLLPEE831 pKa = 4.25 MSALVSRR838 pKa = 11.84 EE839 pKa = 3.98 MYY841 pKa = 10.86 EE842 pKa = 4.48 SMTFCAPIDD851 pKa = 4.36 NIGLAYY857 pKa = 10.18 SDD859 pKa = 3.16 KK860 pKa = 8.68 TTWYY864 pKa = 10.67 VYY866 pKa = 10.51 GSNYY870 pKa = 10.1 NSGDD874 pKa = 3.86 PIITGTKK881 pKa = 9.27 VSQILWPDD889 pKa = 3.61 PPTIDD894 pKa = 5.49 AMWNTAKK901 pKa = 10.83 NYY903 pKa = 9.12 ILKK906 pKa = 9.31 PAASALVGFITGGPAGAAVSAGSTVVNQAINDD938 pKa = 4.01 LLSPKK943 pKa = 9.72 VRR945 pKa = 11.84 EE946 pKa = 4.18 AQKK949 pKa = 10.51 NRR951 pKa = 11.84 PEE953 pKa = 4.2 TTVVQDD959 pKa = 4.51 LEE961 pKa = 4.57 QKK963 pKa = 9.26 TLTKK967 pKa = 9.72 PQSKK971 pKa = 9.55 VEE973 pKa = 3.91 QGKK976 pKa = 7.11 TVEE979 pKa = 5.04 LIPTTSEE986 pKa = 3.68 NKK988 pKa = 9.29 MKK990 pKa = 10.3 PLTLNTTVKK999 pKa = 9.55 STPTPAAEE1007 pKa = 3.75 TMVYY1011 pKa = 10.03 KK1012 pKa = 10.65 EE1013 pKa = 4.37 PIKK1016 pKa = 9.86 TLSVLDD1022 pKa = 4.05 EE1023 pKa = 4.62 SPVNEE1028 pKa = 4.08
Molecular weight: 115.73 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.88
IPC2_protein 5.931
IPC_protein 5.995
Toseland 6.275
ProMoST 6.313
Dawson 6.287
Bjellqvist 6.3
Wikipedia 6.3
Rodwell 6.275
Grimsley 6.389
Solomon 6.287
Lehninger 6.287
Nozaki 6.576
DTASelect 6.751
Thurlkill 6.766
EMBOSS 6.722
Sillero 6.678
Patrickios 3.986
IPC_peptide 6.313
IPC2_peptide 6.59
IPC2.peptide.svr19 6.609
Protein with the highest isoelectric point:
>tr|A0A0F7R4X8|A0A0F7R4X8_9VIRU Capsid protein OS=Camponotus yamaokai virus OX=1608533 PE=4 SV=1
MM1 pKa = 8.04 DD2 pKa = 3.83 IVKK5 pKa = 9.23 MVLKK9 pKa = 9.82 IQTIIAGYY17 pKa = 10.3 NIDD20 pKa = 4.16 EE21 pKa = 5.28 LYY23 pKa = 11.05 ASDD26 pKa = 3.86 AWRR29 pKa = 11.84 QILKK33 pKa = 10.32 AISGRR38 pKa = 11.84 FFPDD42 pKa = 3.03 VFSKK46 pKa = 10.61 GPCYY50 pKa = 9.82 MLFVHH55 pKa = 6.41 LHH57 pKa = 5.62 WLTAKK62 pKa = 10.39 CPYY65 pKa = 7.85 TTEE68 pKa = 4.32 QIVSDD73 pKa = 3.21 ITEE76 pKa = 4.16 WVDD79 pKa = 3.29 SKK81 pKa = 11.22 MEE83 pKa = 3.99 GRR85 pKa = 11.84 TKK87 pKa = 10.66 EE88 pKa = 3.88 VDD90 pKa = 2.98 QTICDD95 pKa = 3.65 KK96 pKa = 11.4 VLDD99 pKa = 4.06 KK100 pKa = 11.43 VVLEE104 pKa = 4.56 WYY106 pKa = 9.95 KK107 pKa = 11.41 GEE109 pKa = 4.29 AGGFLSFKK117 pKa = 10.13 DD118 pKa = 3.47 YY119 pKa = 11.45 CNDD122 pKa = 3.04 YY123 pKa = 10.6 VRR125 pKa = 11.84 WGTSGGAPKK134 pKa = 10.75 AEE136 pKa = 4.11 VLGQEE141 pKa = 4.72 YY142 pKa = 9.94 RR143 pKa = 11.84 SKK145 pKa = 9.22 WAWAISHH152 pKa = 6.31 ATNADD157 pKa = 3.17 GSLKK161 pKa = 10.31 EE162 pKa = 5.53 DD163 pKa = 3.46 YY164 pKa = 10.77 DD165 pKa = 4.36 LYY167 pKa = 11.44 EE168 pKa = 4.19 EE169 pKa = 4.34 ALKK172 pKa = 10.82 EE173 pKa = 4.01 RR174 pKa = 11.84 TNSVIALKK182 pKa = 10.5 EE183 pKa = 4.06 EE184 pKa = 3.96 PAKK187 pKa = 9.98 TRR189 pKa = 11.84 EE190 pKa = 4.19 IITTTMASYY199 pKa = 10.76 LRR201 pKa = 11.84 QSYY204 pKa = 10.82 LMYY207 pKa = 10.51 RR208 pKa = 11.84 WGKK211 pKa = 9.11 PNIPSPISTATWMGKK226 pKa = 7.41 FEE228 pKa = 4.16 RR229 pKa = 11.84 ASPSWYY235 pKa = 10.42 GSIDD239 pKa = 3.39 GEE241 pKa = 4.3 RR242 pKa = 11.84 FDD244 pKa = 5.49 HH245 pKa = 6.71 SVPKK249 pKa = 10.5 QFIIGLMNRR258 pKa = 11.84 LGKK261 pKa = 10.13 LDD263 pKa = 3.58 SEE265 pKa = 4.84 TRR267 pKa = 11.84 QVAQDD272 pKa = 4.0 EE273 pKa = 4.51 IEE275 pKa = 4.39 HH276 pKa = 5.7 MNEE279 pKa = 3.92 LKK281 pKa = 10.94 VIWGEE286 pKa = 5.08 KK287 pKa = 6.14 EE288 pKa = 4.13 WKK290 pKa = 9.29 WEE292 pKa = 3.93 GGLLSGWRR300 pKa = 11.84 ITSIIGSLLSCCVAEE315 pKa = 4.24 YY316 pKa = 10.19 IISKK320 pKa = 7.46 THH322 pKa = 5.45 MEE324 pKa = 4.32 GALHH328 pKa = 5.88 YY329 pKa = 10.81 GVMGDD334 pKa = 3.82 DD335 pKa = 5.08 LIMYY339 pKa = 8.49 SYY341 pKa = 11.05 RR342 pKa = 11.84 EE343 pKa = 4.03 KK344 pKa = 11.16 LEE346 pKa = 3.92 SAKK349 pKa = 10.03 MVEE352 pKa = 4.78 LYY354 pKa = 10.74 RR355 pKa = 11.84 EE356 pKa = 4.27 FGLKK360 pKa = 10.5 ANLAKK365 pKa = 8.35 TTSGSVGEE373 pKa = 3.97 FLRR376 pKa = 11.84 RR377 pKa = 11.84 VLSKK381 pKa = 10.85 GGTWAYY387 pKa = 8.1 PALGFRR393 pKa = 11.84 SIVYY397 pKa = 9.77 ANPWLDD403 pKa = 2.93 HH404 pKa = 4.63 YY405 pKa = 9.79 TYY407 pKa = 11.05 NEE409 pKa = 3.79 EE410 pKa = 5.04 AEE412 pKa = 4.75 VSNCWLTFLSRR423 pKa = 11.84 LLPHH427 pKa = 7.19 CYY429 pKa = 9.96 KK430 pKa = 10.01 KK431 pKa = 9.45 TGDD434 pKa = 3.75 VVSLIMRR441 pKa = 11.84 RR442 pKa = 11.84 LKK444 pKa = 11.18 GNLSMLFGKK453 pKa = 10.31 LDD455 pKa = 3.31 WDD457 pKa = 3.43 SWLRR461 pKa = 11.84 TPISAGGGGALEE473 pKa = 4.45 FSDD476 pKa = 3.74 VSRR479 pKa = 11.84 WSYY482 pKa = 11.17 LDD484 pKa = 3.33 KK485 pKa = 11.41 LRR487 pKa = 11.84 DD488 pKa = 3.55 TDD490 pKa = 3.86 VLSNKK495 pKa = 9.98 AFMSSVFGLTPYY507 pKa = 10.58 KK508 pKa = 10.5 RR509 pKa = 11.84 ILKK512 pKa = 9.74 PITTMKK518 pKa = 10.81 KK519 pKa = 10.03 LDD521 pKa = 4.2 LTTVIYY527 pKa = 9.56 WKK529 pKa = 10.27 NQLRR533 pKa = 11.84 GVDD536 pKa = 3.93 TSPHH540 pKa = 5.8 SSWFKK545 pKa = 10.67 HH546 pKa = 4.55 EE547 pKa = 4.27 TNITRR552 pKa = 11.84 LVYY555 pKa = 10.33 DD556 pKa = 3.23 YY557 pKa = 11.27 VFRR560 pKa = 11.84 KK561 pKa = 9.5 IRR563 pKa = 11.84 LSEE566 pKa = 3.82 LRR568 pKa = 11.84 GGLLHH573 pKa = 7.13 ALPRR577 pKa = 11.84 GLRR580 pKa = 11.84 VTSPQRR586 pKa = 11.84 VVDD589 pKa = 3.87 FLMRR593 pKa = 11.84 GTKK596 pKa = 9.5 EE597 pKa = 3.7 YY598 pKa = 10.7 TGITTIQHH606 pKa = 6.17 TKK608 pKa = 11.05 DD609 pKa = 3.07 SMQAYY614 pKa = 9.79 SDD616 pKa = 3.41 IGAHH620 pKa = 5.07 VVRR623 pKa = 11.84 AICSSKK629 pKa = 10.05 RR630 pKa = 11.84 FTNVRR635 pKa = 11.84 HH636 pKa = 5.91 ISAAVTLYY644 pKa = 10.5 MMEE647 pKa = 4.13 ILKK650 pKa = 10.33 DD651 pKa = 3.4 VYY653 pKa = 10.49 IPYY656 pKa = 8.31 GTWW659 pKa = 2.77
Molecular weight: 75.54 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.934
IPC2_protein 8.112
IPC_protein 7.966
Toseland 8.17
ProMoST 8.478
Dawson 8.785
Bjellqvist 8.843
Wikipedia 8.858
Rodwell 8.858
Grimsley 8.346
Solomon 8.843
Lehninger 8.829
Nozaki 8.902
DTASelect 8.697
Thurlkill 8.756
EMBOSS 8.931
Sillero 8.99
Patrickios 4.317
IPC_peptide 8.843
IPC2_peptide 7.585
IPC2.peptide.svr19 7.748
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
1687
659
1028
843.5
95.64
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.698 ± 0.703
1.778 ± 0.268
5.572 ± 0.169
5.572 ± 0.323
3.142 ± 0.029
6.046 ± 0.803
2.193 ± 0.054
5.809 ± 0.366
5.987 ± 0.743
8.002 ± 1.011
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.26 ± 0.048
4.031 ± 1.04
4.446 ± 0.916
3.023 ± 0.682
5.276 ± 0.318
7.528 ± 0.334
7.765 ± 0.706
6.58 ± 0.331
2.786 ± 0.457
4.505 ± 0.425
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here