Camponotus yamaokai virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; unclassified Totiviridae

Average proteome isoelectric point is 6.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0F7R4X8|A0A0F7R4X8_9VIRU Capsid protein OS=Camponotus yamaokai virus OX=1608533 PE=4 SV=1
MM1 pKa = 7.62MDD3 pKa = 4.52FLTSQATVKK12 pKa = 10.82NCIGWIFSPLMTVGSPTGSLEE33 pKa = 4.23TTFCGQDD40 pKa = 2.92TASRR44 pKa = 11.84NGSKK48 pKa = 9.69HH49 pKa = 5.07QSYY52 pKa = 7.47TTWDD56 pKa = 3.76CLSRR60 pKa = 11.84QYY62 pKa = 11.44LCGSVVVDD70 pKa = 3.31KK71 pKa = 11.38LEE73 pKa = 3.99RR74 pKa = 11.84AKK76 pKa = 11.01RR77 pKa = 11.84EE78 pKa = 3.68VTPRR82 pKa = 11.84MTEE85 pKa = 3.96RR86 pKa = 11.84FQDD89 pKa = 3.45VPTQEE94 pKa = 4.53EE95 pKa = 4.52LDD97 pKa = 4.15ALTEE101 pKa = 4.06MQRR104 pKa = 11.84DD105 pKa = 4.21LYY107 pKa = 11.09HH108 pKa = 7.08DD109 pKa = 3.94GLRR112 pKa = 11.84VFVRR116 pKa = 11.84GKK118 pKa = 11.25GLMTSQQHH126 pKa = 4.6QKK128 pKa = 10.08YY129 pKa = 9.8LSSRR133 pKa = 11.84LEE135 pKa = 3.7RR136 pKa = 11.84STRR139 pKa = 11.84SPRR142 pKa = 11.84KK143 pKa = 9.74KK144 pKa = 9.11RR145 pKa = 11.84TQDD148 pKa = 3.0QEE150 pKa = 4.14LASGSKK156 pKa = 9.28TDD158 pKa = 3.93EE159 pKa = 3.56EE160 pKa = 4.45HH161 pKa = 6.77AAEE164 pKa = 5.6DD165 pKa = 3.8EE166 pKa = 4.4TPDD169 pKa = 3.67RR170 pKa = 11.84VKK172 pKa = 10.7RR173 pKa = 11.84DD174 pKa = 3.28EE175 pKa = 4.25NEE177 pKa = 3.82NKK179 pKa = 9.58FFYY182 pKa = 10.72SDD184 pKa = 4.36TIPVKK189 pKa = 10.78CMGVSTMQCARR200 pKa = 11.84EE201 pKa = 4.05TDD203 pKa = 3.62PMPWSPTFQLMASRR217 pKa = 11.84LNDD220 pKa = 3.57PAATGVLAAVVKK232 pKa = 10.44GPNVRR237 pKa = 11.84DD238 pKa = 3.56ATAWTSLVKK247 pKa = 10.49SIMLRR252 pKa = 11.84QSTRR256 pKa = 11.84YY257 pKa = 9.01EE258 pKa = 3.78LAAMIRR264 pKa = 11.84VLCMALSLADD274 pKa = 3.82EE275 pKa = 4.69SYY277 pKa = 11.53KK278 pKa = 10.64LDD280 pKa = 3.57PTPIRR285 pKa = 11.84FIRR288 pKa = 11.84NEE290 pKa = 3.88HH291 pKa = 6.05KK292 pKa = 9.87VTYY295 pKa = 9.12DD296 pKa = 3.23GQVIRR301 pKa = 11.84EE302 pKa = 4.16KK303 pKa = 10.79PGFDD307 pKa = 2.84AGEE310 pKa = 4.18YY311 pKa = 9.54QVIAMPIDD319 pKa = 3.78VFIALANNSCFEE331 pKa = 4.14NAPHH335 pKa = 6.17GFEE338 pKa = 5.19YY339 pKa = 10.79KK340 pKa = 10.6DD341 pKa = 4.78LDD343 pKa = 3.94IGWTAVPVSSDD354 pKa = 2.46IANFDD359 pKa = 3.55TLIPYY364 pKa = 9.56LAAFLTSDD372 pKa = 3.67LWSGTVNQHH381 pKa = 5.71YY382 pKa = 10.38SIEE385 pKa = 4.15YY386 pKa = 8.89QSDD389 pKa = 3.56NIRR392 pKa = 11.84RR393 pKa = 11.84RR394 pKa = 11.84FDD396 pKa = 3.75EE397 pKa = 3.8TWMPCVNSVNIPGQKK412 pKa = 9.29RR413 pKa = 11.84AALILIDD420 pKa = 4.22EE421 pKa = 4.73TSMTTQNFVKK431 pKa = 9.56LTTGQQFINVPIWKK445 pKa = 9.65GNNNVVPVNWGNLWRR460 pKa = 11.84AYY462 pKa = 9.58WNTNNISKK470 pKa = 9.87IRR472 pKa = 11.84HH473 pKa = 4.72TALLAHH479 pKa = 6.7EE480 pKa = 5.11KK481 pKa = 9.63ICTRR485 pKa = 11.84MGVGDD490 pKa = 3.84ACGTAVSLVAEE501 pKa = 5.28LYY503 pKa = 8.55GHH505 pKa = 7.61WYY507 pKa = 9.8HH508 pKa = 7.52GIAPRR513 pKa = 11.84YY514 pKa = 7.94KK515 pKa = 9.55AKK517 pKa = 10.12TMAFDD522 pKa = 3.9YY523 pKa = 11.33DD524 pKa = 3.85KK525 pKa = 11.28VPYY528 pKa = 9.6GAWTIDD534 pKa = 2.92GDD536 pKa = 4.18YY537 pKa = 10.93LDD539 pKa = 3.8KK540 pKa = 11.21RR541 pKa = 11.84KK542 pKa = 8.95MFRR545 pKa = 11.84SHH547 pKa = 7.15KK548 pKa = 9.55FTLDD552 pKa = 3.33DD553 pKa = 4.48PKK555 pKa = 11.27CMEE558 pKa = 3.54ARR560 pKa = 11.84RR561 pKa = 11.84RR562 pKa = 11.84CVAYY566 pKa = 10.12NFSGVSPMHH575 pKa = 6.73LSPTGLVKK583 pKa = 10.16IAYY586 pKa = 9.59VNDD589 pKa = 3.55SEE591 pKa = 4.55RR592 pKa = 11.84LRR594 pKa = 11.84VTWAEE599 pKa = 3.79QHH601 pKa = 6.67PEE603 pKa = 3.93FAATTYY609 pKa = 10.67NIQTMSSIYY618 pKa = 9.91RR619 pKa = 11.84VAAACGLILTHH630 pKa = 6.5TDD632 pKa = 2.67SYY634 pKa = 11.96AFGEE638 pKa = 4.67VQGATHH644 pKa = 7.98WIHH647 pKa = 6.21MLSCAISFTTSSFLSINDD665 pKa = 3.84LAPRR669 pKa = 11.84DD670 pKa = 3.76WIGIDD675 pKa = 3.6NRR677 pKa = 11.84DD678 pKa = 3.67DD679 pKa = 3.65TQHH682 pKa = 6.82RR683 pKa = 11.84EE684 pKa = 3.98SVMGGLKK691 pKa = 8.78TALYY695 pKa = 10.14GGLINHH701 pKa = 5.79VNIEE705 pKa = 4.2QYY707 pKa = 10.29FGHH710 pKa = 6.77IPEE713 pKa = 4.37WDD715 pKa = 3.68LDD717 pKa = 3.85IMSEE721 pKa = 4.61YY722 pKa = 10.87YY723 pKa = 10.61GVSAYY728 pKa = 11.33NNINWMTFSPVPFHH742 pKa = 6.99ATWQWVCKK750 pKa = 10.08LQLEE754 pKa = 4.84TGAPMPKK761 pKa = 10.28GITTFKK767 pKa = 10.71YY768 pKa = 9.57NSKK771 pKa = 10.84NYY773 pKa = 10.58DD774 pKa = 3.7CIKK777 pKa = 9.74LTKK780 pKa = 9.7EE781 pKa = 4.1CNEE784 pKa = 3.88HH785 pKa = 6.76KK786 pKa = 10.15MNSVCAIDD794 pKa = 3.72VYY796 pKa = 10.67RR797 pKa = 11.84RR798 pKa = 11.84CPTVVARR805 pKa = 11.84EE806 pKa = 3.75PDD808 pKa = 3.52ANYY811 pKa = 10.34VPILQWIDD819 pKa = 3.16NVSRR823 pKa = 11.84YY824 pKa = 10.42SSVLLPEE831 pKa = 4.25MSALVSRR838 pKa = 11.84EE839 pKa = 3.98MYY841 pKa = 10.86EE842 pKa = 4.48SMTFCAPIDD851 pKa = 4.36NIGLAYY857 pKa = 10.18SDD859 pKa = 3.16KK860 pKa = 8.68TTWYY864 pKa = 10.67VYY866 pKa = 10.51GSNYY870 pKa = 10.1NSGDD874 pKa = 3.86PIITGTKK881 pKa = 9.27VSQILWPDD889 pKa = 3.61PPTIDD894 pKa = 5.49AMWNTAKK901 pKa = 10.83NYY903 pKa = 9.12ILKK906 pKa = 9.31PAASALVGFITGGPAGAAVSAGSTVVNQAINDD938 pKa = 4.01LLSPKK943 pKa = 9.72VRR945 pKa = 11.84EE946 pKa = 4.18AQKK949 pKa = 10.51NRR951 pKa = 11.84PEE953 pKa = 4.2TTVVQDD959 pKa = 4.51LEE961 pKa = 4.57QKK963 pKa = 9.26TLTKK967 pKa = 9.72PQSKK971 pKa = 9.55VEE973 pKa = 3.91QGKK976 pKa = 7.11TVEE979 pKa = 5.04LIPTTSEE986 pKa = 3.68NKK988 pKa = 9.29MKK990 pKa = 10.3PLTLNTTVKK999 pKa = 9.55STPTPAAEE1007 pKa = 3.75TMVYY1011 pKa = 10.03KK1012 pKa = 10.65EE1013 pKa = 4.37PIKK1016 pKa = 9.86TLSVLDD1022 pKa = 4.05EE1023 pKa = 4.62SPVNEE1028 pKa = 4.08

Molecular weight:
115.73 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0F7R4X8|A0A0F7R4X8_9VIRU Capsid protein OS=Camponotus yamaokai virus OX=1608533 PE=4 SV=1
MM1 pKa = 8.04DD2 pKa = 3.83IVKK5 pKa = 9.23MVLKK9 pKa = 9.82IQTIIAGYY17 pKa = 10.3NIDD20 pKa = 4.16EE21 pKa = 5.28LYY23 pKa = 11.05ASDD26 pKa = 3.86AWRR29 pKa = 11.84QILKK33 pKa = 10.32AISGRR38 pKa = 11.84FFPDD42 pKa = 3.03VFSKK46 pKa = 10.61GPCYY50 pKa = 9.82MLFVHH55 pKa = 6.41LHH57 pKa = 5.62WLTAKK62 pKa = 10.39CPYY65 pKa = 7.85TTEE68 pKa = 4.32QIVSDD73 pKa = 3.21ITEE76 pKa = 4.16WVDD79 pKa = 3.29SKK81 pKa = 11.22MEE83 pKa = 3.99GRR85 pKa = 11.84TKK87 pKa = 10.66EE88 pKa = 3.88VDD90 pKa = 2.98QTICDD95 pKa = 3.65KK96 pKa = 11.4VLDD99 pKa = 4.06KK100 pKa = 11.43VVLEE104 pKa = 4.56WYY106 pKa = 9.95KK107 pKa = 11.41GEE109 pKa = 4.29AGGFLSFKK117 pKa = 10.13DD118 pKa = 3.47YY119 pKa = 11.45CNDD122 pKa = 3.04YY123 pKa = 10.6VRR125 pKa = 11.84WGTSGGAPKK134 pKa = 10.75AEE136 pKa = 4.11VLGQEE141 pKa = 4.72YY142 pKa = 9.94RR143 pKa = 11.84SKK145 pKa = 9.22WAWAISHH152 pKa = 6.31ATNADD157 pKa = 3.17GSLKK161 pKa = 10.31EE162 pKa = 5.53DD163 pKa = 3.46YY164 pKa = 10.77DD165 pKa = 4.36LYY167 pKa = 11.44EE168 pKa = 4.19EE169 pKa = 4.34ALKK172 pKa = 10.82EE173 pKa = 4.01RR174 pKa = 11.84TNSVIALKK182 pKa = 10.5EE183 pKa = 4.06EE184 pKa = 3.96PAKK187 pKa = 9.98TRR189 pKa = 11.84EE190 pKa = 4.19IITTTMASYY199 pKa = 10.76LRR201 pKa = 11.84QSYY204 pKa = 10.82LMYY207 pKa = 10.51RR208 pKa = 11.84WGKK211 pKa = 9.11PNIPSPISTATWMGKK226 pKa = 7.41FEE228 pKa = 4.16RR229 pKa = 11.84ASPSWYY235 pKa = 10.42GSIDD239 pKa = 3.39GEE241 pKa = 4.3RR242 pKa = 11.84FDD244 pKa = 5.49HH245 pKa = 6.71SVPKK249 pKa = 10.5QFIIGLMNRR258 pKa = 11.84LGKK261 pKa = 10.13LDD263 pKa = 3.58SEE265 pKa = 4.84TRR267 pKa = 11.84QVAQDD272 pKa = 4.0EE273 pKa = 4.51IEE275 pKa = 4.39HH276 pKa = 5.7MNEE279 pKa = 3.92LKK281 pKa = 10.94VIWGEE286 pKa = 5.08KK287 pKa = 6.14EE288 pKa = 4.13WKK290 pKa = 9.29WEE292 pKa = 3.93GGLLSGWRR300 pKa = 11.84ITSIIGSLLSCCVAEE315 pKa = 4.24YY316 pKa = 10.19IISKK320 pKa = 7.46THH322 pKa = 5.45MEE324 pKa = 4.32GALHH328 pKa = 5.88YY329 pKa = 10.81GVMGDD334 pKa = 3.82DD335 pKa = 5.08LIMYY339 pKa = 8.49SYY341 pKa = 11.05RR342 pKa = 11.84EE343 pKa = 4.03KK344 pKa = 11.16LEE346 pKa = 3.92SAKK349 pKa = 10.03MVEE352 pKa = 4.78LYY354 pKa = 10.74RR355 pKa = 11.84EE356 pKa = 4.27FGLKK360 pKa = 10.5ANLAKK365 pKa = 8.35TTSGSVGEE373 pKa = 3.97FLRR376 pKa = 11.84RR377 pKa = 11.84VLSKK381 pKa = 10.85GGTWAYY387 pKa = 8.1PALGFRR393 pKa = 11.84SIVYY397 pKa = 9.77ANPWLDD403 pKa = 2.93HH404 pKa = 4.63YY405 pKa = 9.79TYY407 pKa = 11.05NEE409 pKa = 3.79EE410 pKa = 5.04AEE412 pKa = 4.75VSNCWLTFLSRR423 pKa = 11.84LLPHH427 pKa = 7.19CYY429 pKa = 9.96KK430 pKa = 10.01KK431 pKa = 9.45TGDD434 pKa = 3.75VVSLIMRR441 pKa = 11.84RR442 pKa = 11.84LKK444 pKa = 11.18GNLSMLFGKK453 pKa = 10.31LDD455 pKa = 3.31WDD457 pKa = 3.43SWLRR461 pKa = 11.84TPISAGGGGALEE473 pKa = 4.45FSDD476 pKa = 3.74VSRR479 pKa = 11.84WSYY482 pKa = 11.17LDD484 pKa = 3.33KK485 pKa = 11.41LRR487 pKa = 11.84DD488 pKa = 3.55TDD490 pKa = 3.86VLSNKK495 pKa = 9.98AFMSSVFGLTPYY507 pKa = 10.58KK508 pKa = 10.5RR509 pKa = 11.84ILKK512 pKa = 9.74PITTMKK518 pKa = 10.81KK519 pKa = 10.03LDD521 pKa = 4.2LTTVIYY527 pKa = 9.56WKK529 pKa = 10.27NQLRR533 pKa = 11.84GVDD536 pKa = 3.93TSPHH540 pKa = 5.8SSWFKK545 pKa = 10.67HH546 pKa = 4.55EE547 pKa = 4.27TNITRR552 pKa = 11.84LVYY555 pKa = 10.33DD556 pKa = 3.23YY557 pKa = 11.27VFRR560 pKa = 11.84KK561 pKa = 9.5IRR563 pKa = 11.84LSEE566 pKa = 3.82LRR568 pKa = 11.84GGLLHH573 pKa = 7.13ALPRR577 pKa = 11.84GLRR580 pKa = 11.84VTSPQRR586 pKa = 11.84VVDD589 pKa = 3.87FLMRR593 pKa = 11.84GTKK596 pKa = 9.5EE597 pKa = 3.7YY598 pKa = 10.7TGITTIQHH606 pKa = 6.17TKK608 pKa = 11.05DD609 pKa = 3.07SMQAYY614 pKa = 9.79SDD616 pKa = 3.41IGAHH620 pKa = 5.07VVRR623 pKa = 11.84AICSSKK629 pKa = 10.05RR630 pKa = 11.84FTNVRR635 pKa = 11.84HH636 pKa = 5.91ISAAVTLYY644 pKa = 10.5MMEE647 pKa = 4.13ILKK650 pKa = 10.33DD651 pKa = 3.4VYY653 pKa = 10.49IPYY656 pKa = 8.31GTWW659 pKa = 2.77

Molecular weight:
75.54 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1687

659

1028

843.5

95.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.698 ± 0.703

1.778 ± 0.268

5.572 ± 0.169

5.572 ± 0.323

3.142 ± 0.029

6.046 ± 0.803

2.193 ± 0.054

5.809 ± 0.366

5.987 ± 0.743

8.002 ± 1.011

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.26 ± 0.048

4.031 ± 1.04

4.446 ± 0.916

3.023 ± 0.682

5.276 ± 0.318

7.528 ± 0.334

7.765 ± 0.706

6.58 ± 0.331

2.786 ± 0.457

4.505 ± 0.425

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski