Streptococcus satellite phage Javan378

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZL97|A0A4D5ZL97_9VIRU HTH merR-type domain-containing protein OS=Streptococcus satellite phage Javan378 OX=2558668 GN=JavanS378_0006 PE=4 SV=1
MM1 pKa = 7.5NKK3 pKa = 8.89TEE5 pKa = 5.64LINKK9 pKa = 8.59IDD11 pKa = 3.49KK12 pKa = 10.92AMNRR16 pKa = 11.84LDD18 pKa = 3.71FLAEE22 pKa = 3.59IMEE25 pKa = 4.43GEE27 pKa = 4.26KK28 pKa = 10.05TLTAGLNNISDD39 pKa = 3.7ILFEE43 pKa = 4.17IRR45 pKa = 11.84GEE47 pKa = 3.8ISLNGIKK54 pKa = 10.41GDD56 pKa = 3.89EE57 pKa = 4.19NVV59 pKa = 3.36

Molecular weight: 6.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZM52|A0A4D5ZM52_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan378 OX=2558668 GN=JavanS378_0008 PE=4 SV=1
MM1 pKa = 7.79NITEE5 pKa = 4.26YY6 pKa = 10.61KK7 pKa = 10.28KK8 pKa = 10.39KK9 pKa = 10.61DD10 pKa = 3.14GTIVYY15 pKa = 7.65RR16 pKa = 11.84TSLYY20 pKa = 10.84LGIDD24 pKa = 3.71SITGKK29 pKa = 10.31KK30 pKa = 9.62IKK32 pKa = 8.03TTISARR38 pKa = 11.84TKK40 pKa = 10.83KK41 pKa = 10.02EE42 pKa = 3.75IKK44 pKa = 10.46NKK46 pKa = 9.85ALQAKK51 pKa = 9.71VEE53 pKa = 4.19FEE55 pKa = 4.31KK56 pKa = 11.32NGATRR61 pKa = 11.84TAFTQFEE68 pKa = 5.0TYY70 pKa = 10.49SEE72 pKa = 4.9LLDD75 pKa = 4.05SWWEE79 pKa = 4.2TYY81 pKa = 11.16APTIKK86 pKa = 9.84TNSQIAIKK94 pKa = 10.04SQIEE98 pKa = 4.28NYY100 pKa = 9.59LRR102 pKa = 11.84PAFGSYY108 pKa = 10.74KK109 pKa = 10.11LDD111 pKa = 3.41KK112 pKa = 9.33LTPAIIQQQVNRR124 pKa = 11.84WARR127 pKa = 11.84DD128 pKa = 3.33YY129 pKa = 10.89NQNDD133 pKa = 3.7GGFKK137 pKa = 10.37RR138 pKa = 11.84YY139 pKa = 9.11GQLHH143 pKa = 6.68SYY145 pKa = 9.74NKK147 pKa = 10.3RR148 pKa = 11.84ILQYY152 pKa = 10.7GVSLQALKK160 pKa = 10.96SNPAKK165 pKa = 10.48NVLVPKK171 pKa = 10.6VKK173 pKa = 9.61TDD175 pKa = 3.11KK176 pKa = 11.4AKK178 pKa = 10.39IKK180 pKa = 10.6HH181 pKa = 5.38FTDD184 pKa = 3.69SEE186 pKa = 4.26LKK188 pKa = 10.66QFFEE192 pKa = 4.71YY193 pKa = 10.73LDD195 pKa = 4.04SLDD198 pKa = 3.34QKK200 pKa = 10.71RR201 pKa = 11.84FKK203 pKa = 11.24NLFCVTLYY211 pKa = 11.07KK212 pKa = 10.56FLLATGCRR220 pKa = 11.84INEE223 pKa = 3.93ALALEE228 pKa = 4.42WADD231 pKa = 3.18IDD233 pKa = 4.27LDD235 pKa = 3.83NAVVHH240 pKa = 5.5ITKK243 pKa = 9.22TLNYY247 pKa = 8.97RR248 pKa = 11.84LEE250 pKa = 4.38INSPKK255 pKa = 10.42SKK257 pKa = 10.48SSYY260 pKa = 10.15RR261 pKa = 11.84DD262 pKa = 2.72IDD264 pKa = 3.47IDD266 pKa = 3.86PKK268 pKa = 9.31TVSMMKK274 pKa = 9.83QYY276 pKa = 11.1KK277 pKa = 9.55HH278 pKa = 6.31RR279 pKa = 11.84QTKK282 pKa = 7.88EE283 pKa = 3.02AWTLGRR289 pKa = 11.84TEE291 pKa = 4.49KK292 pKa = 10.94VVFSDD297 pKa = 6.3FIHH300 pKa = 7.08EE301 pKa = 4.28YY302 pKa = 9.74PNNRR306 pKa = 11.84TLQARR311 pKa = 11.84LKK313 pKa = 10.14IHH315 pKa = 6.86FKK317 pKa = 9.9QAQVPDD323 pKa = 3.32IGFHH327 pKa = 5.86GFRR330 pKa = 11.84HH331 pKa = 4.87THH333 pKa = 6.74ASLLLNAGIPYY344 pKa = 10.01KK345 pKa = 10.28EE346 pKa = 3.98LQHH349 pKa = 6.73RR350 pKa = 11.84LGHH353 pKa = 5.68STLSMTMDD361 pKa = 4.17TYY363 pKa = 11.68SHH365 pKa = 7.14LSKK368 pKa = 10.81EE369 pKa = 4.43SAKK372 pKa = 10.29KK373 pKa = 10.0AVSIFEE379 pKa = 4.14TALNNIKK386 pKa = 10.62SSS388 pKa = 3.38

Molecular weight: 44.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9

0

9

1959

58

530

217.7

25.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.513 ± 0.761

0.408 ± 0.15

6.023 ± 0.446

7.759 ± 1.023

4.033 ± 0.579

4.594 ± 0.591

1.582 ± 0.381

7.606 ± 0.481

11.026 ± 0.457

10.158 ± 0.885

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.889 ± 0.325

6.228 ± 0.456

2.297 ± 0.191

4.084 ± 0.395

3.675 ± 0.519

6.942 ± 0.605

5.666 ± 0.808

5.054 ± 0.511

0.919 ± 0.191

4.543 ± 0.293
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski